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Aliases for NAALADL2-AS2 Gene

Subcategory (RNA class) for NAALADL2-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NAALADL2-AS2 Gene

  • NAALADL2 Antisense RNA 2 2 3 5
  • NAALADL2 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for NAALADL2-AS2 Gene

Previous GeneCards Identifiers for NAALADL2-AS2 Gene

  • GC00U933381
  • GC03M174953

Summaries for NAALADL2-AS2 Gene

GeneCards Summary for NAALADL2-AS2 Gene

NAALADL2-AS2 (NAALADL2 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NAALADL2-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NAALADL2-AS2 Gene

Genomics for NAALADL2-AS2 Gene

GeneHancer (GH) Regulatory Elements for NAALADL2-AS2 Gene

Promoters and enhancers for NAALADL2-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I175338 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.4 -67.9 -67933 0.8 PKNOX1 FOXA2 ZSCAN4 MAX RAD21 YY1 GATA3 HNF4G FOSL2 FOS NAALADL2-AS2 MIR4789 NAALADL2
GH03I175347 Enhancer 0.8 ENCODE dbSUPER 11 -76.0 -76031 0.2 ZNF687 ZNF10 ELF1 ZNF592 OSR2 ZNF217 JUND GATA3 POLR2A ZNF600 NAALADL2-AS2 MIR4789 NAALADL2
GH03I175335 Enhancer 0.8 ENCODE dbSUPER 10.7 -65.2 -65225 1.4 SMARCE1 JUND CLOCK GATA3 POLR2A DPF2 FOSL2 FOS FOXA1 NAALADL2-AS2 MIR4789 NAALADL2
GH03I175307 Enhancer 0.6 dbSUPER 11.5 -36.9 -36861 1.1 TAF1 PAX8 REST YY1 JUND ATF3 ZBTB33 MLLT1 ATF7 NAALADL2-AS2 MIR4789 NAALADL2
GH03I175341 Enhancer 0.5 dbSUPER 10.4 -72.1 -72073 3.4 ZFHX2 GATA3 GATAD2B HNF4A FOS TCF7L2 EGR2 NAALADL2-AS2 MIR4789 NAALADL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NAALADL2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NAALADL2-AS2 Gene

Genomic Locations for NAALADL2-AS2 Gene
chr3:175,234,861-175,271,096
(GRCh38/hg38)
Size:
36,236 bases
Orientation:
Minus strand
chr3:174,952,651-174,988,885
(GRCh37/hg19)

Genomic View for NAALADL2-AS2 Gene

Genes around NAALADL2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NAALADL2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NAALADL2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NAALADL2-AS2 Gene

Proteins for NAALADL2-AS2 Gene

Post-translational modifications for NAALADL2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NAALADL2-AS2 Gene

Domains & Families for NAALADL2-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NAALADL2-AS2 Gene

Function for NAALADL2-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NAALADL2-AS2 Gene

Localization for NAALADL2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NAALADL2-AS2 Gene

Pathways & Interactions for NAALADL2-AS2 Gene

SuperPathways for NAALADL2-AS2 Gene

No Data Available

Interacting Proteins for NAALADL2-AS2 Gene

Gene Ontology (GO) - Biological Process for NAALADL2-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NAALADL2-AS2 Gene

Drugs & Compounds for NAALADL2-AS2 Gene

No Compound Related Data Available

Transcripts for NAALADL2-AS2 Gene

mRNA/cDNA for NAALADL2-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NAALADL2-AS2 Gene

No ASD Table

Relevant External Links for NAALADL2-AS2 Gene

GeneLoc Exon Structure for
NAALADL2-AS2
ECgene alternative splicing isoforms for
NAALADL2-AS2

Expression for NAALADL2-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NAALADL2-AS2 Gene

genes like me logo Genes that share expression patterns with NAALADL2-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NAALADL2-AS2 Gene

Orthologs for NAALADL2-AS2 Gene

Evolution for NAALADL2-AS2 Gene

ENSEMBL:
Gene Tree for NAALADL2-AS2 (if available)
TreeFam:
Gene Tree for NAALADL2-AS2 (if available)

No data available for Orthologs for NAALADL2-AS2 Gene

Paralogs for NAALADL2-AS2 Gene

No data available for Paralogs for NAALADL2-AS2 Gene

Variants for NAALADL2-AS2 Gene

Sequence variations from dbSNP and Humsavar for NAALADL2-AS2 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000004025 -- 175,239,786(-) G/A intron_variant
rs1000053934 -- 175,257,934(-) G/A intron_variant
rs1000092985 -- 175,249,267(-) T/C intron_variant
rs1000116802 -- 175,240,002(-) A/G intron_variant
rs1000183486 -- 175,260,323(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for NAALADL2-AS2 Gene

Variant ID Type Subtype PubMed ID
esv2672851 CNV deletion 23128226
esv2762367 CNV loss 21179565
esv3598741 CNV loss 21293372
nsv461021 CNV loss 19166990
nsv592550 CNV loss 21841781
nsv7356 OTHER inversion 18451855
nsv829800 CNV gain+loss 17160897

Additional Variant Information for NAALADL2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NAALADL2-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NAALADL2-AS2 Gene

Disorders for NAALADL2-AS2 Gene

Additional Disease Information for NAALADL2-AS2

No disorders were found for NAALADL2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NAALADL2-AS2 Gene

Publications for NAALADL2-AS2 Gene

No publications were found for NAALADL2-AS2 Gene.

Products for NAALADL2-AS2 Gene

Sources for NAALADL2-AS2 Gene

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