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Aliases for NAALADL2-AS1 Gene

Subcategory (RNA class) for NAALADL2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NAALADL2-AS1 Gene

  • NAALADL2 Antisense RNA 1 2 3 5
  • NAALADL2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NAALADL2-AS1 Gene

Previous GeneCards Identifiers for NAALADL2-AS1 Gene

  • GC00U933955
  • GC03M175491

Summaries for NAALADL2-AS1 Gene

GeneCards Summary for NAALADL2-AS1 Gene

NAALADL2-AS1 (NAALADL2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NAALADL2-AS1 Gene

Genomics for NAALADL2-AS1 Gene

Regulatory Elements for NAALADL2-AS1 Gene

Enhancers for NAALADL2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F175743 0.2 ENCODE 10.3 +32.4 32406 0.2 JUND FOS MAFK RNU6-1317P NAALADL2-AS1 GC03P175768 UBE2V1P2
GH03F175526 0.5 Ensembl 9.9 +249.6 249633 1.4 PRDM10 PRDM1 YY1 NAALADL2-AS1 GC03P175466 GC03P175596
GH03F175258 0.2 ENCODE 9.7 +516.8 516793 2.3 PKNOX1 DPF2 RAD21 ZNF217 ZFP69B GATA3 SMARCA4 POLR2A ZNF692 FOSL2 NAALADL2-AS1 UBE2V1P2 NAALADL2-AS2 NAALADL2-AS3
GH03F175787 0.4 Ensembl 0.4 -11.2 -11168 0.2 NAALADL2-AS1 GC03M175843
GH03F175835 0.5 ENCODE 0.2 -60.4 -60386 1.7 GATA3 CEBPG NAALADL2-AS1 GC03M175843
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around NAALADL2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NAALADL2-AS1 Gene

Chromosome:
3
Start:
175,773,145 bp from pter
End:
175,776,333 bp from pter
Size:
3,189 bases
Orientation:
Minus strand

Genomic View for NAALADL2-AS1 Gene

Genes around NAALADL2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NAALADL2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NAALADL2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NAALADL2-AS1 Gene

Proteins for NAALADL2-AS1 Gene

Post-translational modifications for NAALADL2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NAALADL2-AS1 Gene

Domains & Families for NAALADL2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NAALADL2-AS1 Gene

Function for NAALADL2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NAALADL2-AS1 Gene

Localization for NAALADL2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NAALADL2-AS1 Gene

Pathways & Interactions for NAALADL2-AS1 Gene

SuperPathways for NAALADL2-AS1 Gene

No Data Available

Interacting Proteins for NAALADL2-AS1 Gene

Gene Ontology (GO) - Biological Process for NAALADL2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NAALADL2-AS1 Gene

Transcripts for NAALADL2-AS1 Gene

mRNA/cDNA for NAALADL2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NAALADL2-AS1 Gene

No ASD Table

Relevant External Links for NAALADL2-AS1 Gene

GeneLoc Exon Structure for
NAALADL2-AS1
ECgene alternative splicing isoforms for
NAALADL2-AS1

Expression for NAALADL2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NAALADL2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NAALADL2-AS1 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with NAALADL2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NAALADL2-AS1 Gene

Orthologs for NAALADL2-AS1 Gene

Evolution for NAALADL2-AS1 Gene

ENSEMBL:
Gene Tree for NAALADL2-AS1 (if available)
TreeFam:
Gene Tree for NAALADL2-AS1 (if available)

No data available for Orthologs for NAALADL2-AS1 Gene

Paralogs for NAALADL2-AS1 Gene

No data available for Paralogs for NAALADL2-AS1 Gene

Variants for NAALADL2-AS1 Gene

Sequence variations from dbSNP and Humsavar for NAALADL2-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs112083199 -- 175,773,887(+) AGCCA(A/G)CTATA intron-variant
rs112210951 -- 175,775,215(+) TAAAT(A/G)TGGGA intron-variant
rs114012415 -- 175,773,110(+) GAGAA(A/C)GTGGA intron-variant, downstream-variant-500B
rs114658906 -- 175,773,443(+) CAGTT(G/T)TCTTC intron-variant, downstream-variant-500B
rs114981490 -- 175,778,091(+) CTAAC(A/G)TATGT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for NAALADL2-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2763715 CNV loss 21179565
esv32881 CNV loss 17666407
esv3569129 CNV loss 25503493
esv3893821 CNV loss 25118596
nsv1001544 CNV loss 25217958
nsv1002662 CNV gain 25217958
nsv526163 CNV loss 19592680
nsv7356 OTHER inversion 18451855

Relevant External Links for NAALADL2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NAALADL2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NAALADL2-AS1 Gene

Disorders for NAALADL2-AS1 Gene

Relevant External Links for NAALADL2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NAALADL2-AS1

No disorders were found for NAALADL2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NAALADL2-AS1 Gene

Publications for NAALADL2-AS1 Gene

No publications were found for NAALADL2-AS1 Gene.

Products for NAALADL2-AS1 Gene

Sources for NAALADL2-AS1 Gene

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