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NAA11 Gene

protein-coding   GIFtS: 41
GCID: GC04M080237

N(Alpha)-Acetyltransferase 11, NatA Catalytic Subunit

(Previous name: ARD1 homolog B (S. cerevisiae))
(Previous symbol: ARD1B)
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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
N(Alpha)-Acetyltransferase 11, NatA Catalytic Subunit1 2     =N-Terminal Acetyltransferase Complex ARD1 Subunit Homolog B2
ARD1B1 2 3     ARD1 Homolog B2
NatA Catalytic Subunit Naa112 3     Human Arrest Defective 22
ARD22 3     N-Alpha-Acetyltransferase 112
hARD22 3     N-Alpha-Acetyltransferase 11, NatA Catalytic Subunit2
N-Terminal Acetyltransferase Complex ARD1 Subunit Homolog B2 3     EC 2.3.1.883
ARD1 Homolog B (S. Cerevisiae)1     

External Ids:    HGNC: 281251   Entrez Gene: 847792   Ensembl: ENSG000001562697   UniProtKB: Q9BSU33   

Export aliases for NAA11 gene to outside databases

Previous GC identifer: GC04M075985


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for NAA11 Gene:
NAA11 (N(alpha)-acetyltransferase 11, NatA catalytic subunit) is a protein-coding gene. GO annotations related to this gene include peptide alpha-N-acetyltransferase activity. An important paralog of this gene is NAA10.

UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3
Function: Displays alpha (N-terminal) acetyltransferase activity. Proposed alternative catalytic subunit of the
N-terminal acetyltransferase A (NatA) complex




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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Regulatory elements:
   Search for regulatory transcription factor binding sites for NAA11
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search Chromatin IP Primers for NAA11

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat NAA11


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q21.21   Ensembl cytogenetic band:  4q21.21   HGNC cytogenetic band: 4q21.23

NAA11 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NAA11 gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04M080237:  view genomic region     (about GC identifiers)

Start:
80,146,848 bp from pter      End:
80,247,204 bp from pter
Size:
100,357 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3 (See protein sequence)
Recommended Name: N-alpha-acetyltransferase 11  
Size: 229 amino acids; 25979 Da
Subunit: Component of the N-terminal acetyltransferase A (NatA) complex composed of NAA11 and NAA15 (Probable).
Interacts with HIF1A
Sequence caution: Sequence=AAH04552.2; Type=Erroneous initiation; Sequence=AAH63623.1; Type=Erroneous initiation;
Sequence=AAH80651.1; Type=Erroneous initiation;
Secondary accessions: Q66K19 Q6P479

Explore the universe of human proteins at neXtProt for NAA11: NX_Q9BSU3

Explore proteomics data for NAA11 at MOPED

Post-translational modifications: 

  • Ubiquitination2 at Lys89, Lys105, Lys148
  • Modification sites at PhosphoSitePlus

  • See NAA11 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_116082.1  
    ENSEMBL proteins: 
     ENSP00000422022   ENSP00000286794  

    NAA11 Human Recombinant Protein Products:

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    Browse Proteins at Cloud-Clone Corp.

     
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    Browse ELISAs at Cloud-Clone Corp.
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    Search eBioscience for ELISAs for NAA11 


    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    HGNC Gene Families:
    NAA: N(alpha)-acetyltransferase subunits

    2 InterPro protein domains:
     IPR000182 GNAT_dom
     IPR016181 Acyl_CoA_acyltransferase

    Graphical View of Domain Structure for InterPro Entry Q9BSU3

    ProtoNet protein and cluster: Q9BSU3

    1 Blocks protein domain: IPB000182 GCN5-related N-acetyltransferase

    UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3
    Similarity: Belongs to the acetyltransferase family. ARD1 subfamily
    Similarity: Contains 1 N-acetyltransferase domain


    Find genes that share domains with NAA11           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:

         UniProtKB/Swiss-Prot Summary: NAA11_HUMAN, Q9BSU3
    Function: Displays alpha (N-terminal) acetyltransferase activity. Proposed alternative catalytic subunit of the
    N-terminal acetyltransferase A (NatA) complex
    Catalytic activity: Acetyl-CoA + peptide = N(alpha)-acetylpeptide + CoA

         Enzyme Number (IUBMB): EC 2.3.1.881

         Gene Ontology (GO): 4 molecular function terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004596peptide alpha-N-acetyltransferase activity IDA16638120
    GO:0005515protein binding IPI19480662
    GO:0008080N-acetyltransferase activity ----
    GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups ----
         
    Find genes that share ontologies with NAA11           About GenesLikeMe


    Phenotypes:
         1 GenomeRNAi human phenotype for NAA11:
     Decreased Wnt reporter activit 

    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for NAA11
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    hsa-miR-515-5p hsa-miR-433 hsa-miR-576-3p hsa-miR-205 hsa-miR-581 hsa-miR-519e*
    Browse SwitchGear 3'UTR luciferase reporter plasmids
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    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    NAA11_HUMAN, Q9BSU3: Cytoplasm. Nucleus
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    nucleus5
    cytoskeleton4
    golgi apparatus4
    cytosol3
    extracellular1

    Gene Ontology (GO): 5 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--
    GO:0005737cytoplasm ----
    GO:0005794Golgi apparatus ----
    GO:0005813centrosome ----
    GO:0031415NatA complex IDA16638120

    Find genes that share ontologies with NAA11           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for NAA11
    Interactions:

        Search GeneGlobe Interaction Network for NAA11

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    Selected Interacting proteins for NAA11 (Q9BSU33 ENSP000002867944) via UniProtKB, MINT, STRING, and/or I2D (see all 49)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    NAA16Q6N0693, ENSP000003687164I2D: score=1 STRING: ENSP00000368716
    HIF1AQ166653, ENSP000003380184I2D: score=1 STRING: ENSP00000338018
    NAA15Q9BXJ93, ENSP000002965434I2D: score=2 STRING: ENSP00000296543
    NAA35ENSP000003549724STRING: ENSP00000354972
    HYPKENSP000003844744STRING: ENSP00000384474
    About this table

    Gene Ontology (GO): 1 biological process term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006474N-terminal protein amino acid acetylation IDA16638120

    Find genes that share ontologies with NAA11           About GenesLikeMe



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for NAA11



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for NAA11 gene: 
    NM_032693.2  

    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000511542 ENST00000513733 ENST00000286794(uc003hlt.4)
    miRNA
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    6 qRT-PCR Assays for microRNAs that regulate NAA11:
    hsa-miR-515-5p hsa-miR-433 hsa-miR-576-3p hsa-miR-205 hsa-miR-581 hsa-miR-519e*
    Browse SwitchGear 3'UTR luciferase reporter plasmids
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    GenScript: all cDNA clones in your preferred vector: NAA11 (NM_032693)
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      QuantiTect SYBR Green Assays in human, mouse, rat NAA11
      QuantiFast Probe-based Assays in human, mouse, rat NAA11

    18 AceView cDNA sequences:

    CR605070 BC063623 BC080651 BC004552 BE894043 BE274897 BU188397 BG717714 
    BX398773 BX283809 BX359054 BX377969 BE274723 CB156091 BE408199 BE728501 
    BX337855 BF125333 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    NAA11 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: CCCTCTTCCT
    NAA11 Expression
    About this image

    NAA11 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    NAA11 Protein Expression

    UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3
    Tissue specificity: Present in several cell lines, with highest levels in MCF-7 cells (at protein level)

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NAA11

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of eukaryotes.

    Orthologs for NAA11 gene from Selected species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Naa111 , 5 N(alpha)-acetyltransferase 11, NatA catalytic subunit1, 5 83.89(n)1
    86.73(a)1
      5 (47.62 cM)5
    972431  NM_001033191.21  NP_001028363.11 
     973822245 
    zebrafish
    (Danio rerio)
    Actinopterygii naa106
    N(alpha)-acetyltransferase 10, NatA catalytic subu...
    75(a)
    1 → many
    23(13944337-13952423) ENSDARG00000071060
    fruit fly
    (Drosophila melanogaster)
    Insecta vnc6
    variable nurse cells
    65(a)
    1 → many
    3L(9965412-9967123)
    worm
    (Caenorhabditis elegans)
    Secernentea K07H8.36
    Protein K07H8.3 (K07H8.3) mRNA, complete cds
    66(a)
    1 → many
    IV(8290273-8291498) WBGene00019505
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes ARD11 ARD1 57.4(n)
    59.6(a)
      856404   NP_011877.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT5G137801 AT5G13780 65.54(n)
    68.24(a)
      831223  NM_121381.3  NP_196882.1 
    rice
    (Oryza sativa)
    Liliopsida Os04g06358001 Os04g0635800 62.69(n)
    68.87(a)
      4337136  NM_001060546.1  NP_001054011.1 


    ENSEMBL Gene Tree for NAA11 (if available)
    TreeFam Gene Tree for NAA11 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for NAA11 gene
    NAA102  
    2 SIMAP similar genes for NAA11 using alignment to 2 protein entries:     NAA11_HUMAN (see all proteins):
    ARD1A    NAA10

    Find genes that share paralogs with NAA11           About GenesLikeMe



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for NAA11 (see all 187)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 4 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1438459841,2
    --80237777(+) ACATAA/GAAACA 1 -- int10--------
    rs1830533731,2
    --80237833(+) CAGAGG/TTCAAG 1 -- int10--------
    rs1880907051,2
    --80237883(+) AAAAAC/TAGATT 1 -- int10--------
    rs174418911,2
    C,F,H--80237953(+) CACATC/TTTTAA 1 -- int120Minor allele frequency- T:0.46NA EA NS WA 1424
    rs1915824291,2
    --80238035(+) AGTAGA/GAGGAA 1 -- int10--------
    rs1487993621,2
    --80238083(+) CAGGAC/TATTTA 1 -- int10--------
    rs1830452141,2
    --80238180(+) GTAACC/TAATGA 1 -- int10--------
    rs1873208551,2
    --80238376(+) AAGGTA/GATGCC 1 -- ut310--------
    rs610994561,2
    C--80238592(+) TCTTC-/AAGAGT 1 -- ut311Minor allele frequency- A:0.50CSA 2
    rs752082581,2
    C,F--80238597(+) AAGAGT/CTTGCC 1 -- ut311Minor allele frequency- C:0.03WA 118

    HapMap Linkage Disequilibrium report for NAA11 (80146848 - 80247204 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 2 variations for NAA11:    About this table    
    Variant IDTypeSubtypePubMed ID
    esv2727859CNV Deletion23290073
    nsv879505CNV Loss21882294

    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing NAA11
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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      --

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for NAA11 gene, integrated from 10 sources (see all 14):
    (articles sorted by number of sources associating them with NAA11)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A synopsis of eukaryotic Nalpha-terminal acetyltransferases: nomenclature, subunits and substrates. (PubMed id 19660095)1, 2, 3 Polevoda B.... Sherman F. (BMC Proc. 2009)
    2. Characterization of hARD2, a processed hARD1 gene duplicate, encoding a human protein N-alpha-acetyltransferase. (PubMed id 16638120)1, 2, 3 Arnesen T.... Lillehaug J.R. (BMC Biochem. 2006)
    3. Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass. (PubMed id 23000965)1 Povlsen L.K....Choudhary C. (Nat. Cell Biol. 2012)
    4. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (Mol. Cell 2011)
    5. Up-regulation of human arrest-defective 1 protein is correlated with metastatic phenotype and poor prognosis in breast cancer. (PubMed id 22292636)1 Wang Z.H....Tan D.Y. (Asian Pac. J. Cancer Prev. 2011)
    6. Expression of human NAA11 (ARD1B) gene is tissue-specific and is regulated by DNA methylation. (PubMed id 22048246)1 Pang A.L....Rennert O.M. (Epigenetics 2011)
    7. Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels. (PubMed id 21987572)1 Lee K.A....Doedens J.R. (J. Biol. Chem. 2011)
    8. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (amp 2011)
    9. Global identification of modular cullin-RING ligase substrates. (PubMed id 21963094)1 Emanuele M.J....Elledge S.J. (Cell 2011)
    10. LOH analysis of genes around D4S2964 identifies ARD1B as a prognostic predictor of hepatocellular carcinoma. (PubMed id 20419844)1 Huang G.L....Wang H.Y. (World J. Gastroenterol. 2010)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 84779 HGNC: 28125 AceView: MGC10646 Ensembl:ENSG00000156269 euGenes: HUgn84779
    ECgene: NAA11 H-InvDB: NAA11

    (According to HUGE)
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    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for NAA11 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for NAA11 gene:
    Search GeneIP for patents involving NAA11

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, eBioscience, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
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