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Aliases for NAA10 Gene

Aliases for NAA10 Gene

  • N(Alpha)-Acetyltransferase 10, NatA Catalytic Subunit 2 3 5
  • N-Terminal Acetyltransferase Complex ARD1 Subunit Homolog A 3 4
  • NatA Catalytic Subunit Naa10 3 4
  • ARD1A 3 4
  • ARD1 3 4
  • TE2 3 4
  • ARD1 Homolog A, N-Acetyltransferase (S. Cerevisiae) 2
  • ARD1 Homolog, N-Acetyltransferase (S. Cerevisiae) 2
  • N-Acetyltransferase ARD1, Human Homolog Of 3
  • ARD1 Homolog A, N-Acetyltransferase 3
  • N-Alpha-Acetyltransferase 10 3
  • EC 2.3.1.88 4
  • EC 2.3.1.- 4
  • MCOPS1 3
  • DXS707 3
  • ARD1P 3
  • OGDNS 3
  • NATD 3

External Ids for NAA10 Gene

Previous HGNC Symbols for NAA10 Gene

  • ARD1
  • ARD1A

Previous GeneCards Identifiers for NAA10 Gene

  • GC0XM153194
  • GC0XM141848

Summaries for NAA10 Gene

Entrez Gene Summary for NAA10 Gene

  • N-alpha-acetylation is among the most common post-translational protein modifications in eukaryotic cells. This process involves the transfer of an acetyl group from acetyl-coenzyme A to the alpha-amino group on a nascent polypeptide and is essential for normal cell function. This gene encodes an N-terminal acetyltransferase that functions as the catalytic subunit of the major amino-terminal acetyltransferase A complex. Mutations in this gene are the cause of Ogden syndrome. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jan 2012]

GeneCards Summary for NAA10 Gene

NAA10 (N(Alpha)-Acetyltransferase 10, NatA Catalytic Subunit) is a Protein Coding gene. Diseases associated with NAA10 include N-Terminal Acetyltransferase Deficiency and Microphthalmia, Syndromic 1. Among its related pathways are Chromatin Regulation / Acetylation and Hypoxic and oxygen homeostasis regulation of HIF-1-alpha. GO annotations related to this gene include transferase activity, transferring acyl groups other than amino-acyl groups and N-acetyltransferase activity. An important paralog of this gene is NAA11.

UniProtKB/Swiss-Prot for NAA10 Gene

  • Catalytic subunit of the N-terminal acetyltransferase A (NatA) complex which displays alpha (N-terminal) acetyltransferase activity. The NAT activity may be important for vascular, hematopoietic and neuronal growth and development. Without NAA15, displays epsilon (internal) acetyltransferase activity towards HIF1A, thereby promoting its degradation. Represses MYLK kinase activity by acetylation, and thus represses tumor cell migration. Acetylates, and stabilizes TSC2, thereby repressing mTOR activity and suppressing cancer development.

Gene Wiki entry for NAA10 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NAA10 Gene

Genomics for NAA10 Gene

Regulatory Elements for NAA10 Gene

Enhancers for NAA10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around NAA10 on UCSC Golden Path with GeneCards custom track

Promoters for NAA10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around NAA10 on UCSC Golden Path with GeneCards custom track

Genomic Location for NAA10 Gene

Chromosome:
X
Start:
153,929,242 bp from pter
End:
153,935,223 bp from pter
Size:
5,982 bases
Orientation:
Minus strand

Genomic View for NAA10 Gene

Genes around NAA10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NAA10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NAA10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NAA10 Gene

Proteins for NAA10 Gene

  • Protein details for NAA10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P41227-NAA10_HUMAN
    Recommended name:
    N-alpha-acetyltransferase 10
    Protein Accession:
    P41227
    Secondary Accessions:
    • A6NM98

    Protein attributes for NAA10 Gene

    Size:
    235 amino acids
    Molecular mass:
    26459 Da
    Quaternary structure:
    • Component of the N-terminal acetyltransferase A (NatA) complex composed of NAA10 and NAA15 or NAA16. Interacts with HIF1A (via its ODD domain); the interaction increases HIF1A protein stability during normoxia, an down-regulates it when induced by hypoxia. Interacts with NAA50 and with the ribosome. Binds to MYLK. Associates with HYPK when in complex with NAA15. Interacts (via its C-terminal domain) with TSC2, leading to its acetylation.

    Alternative splice isoforms for NAA10 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NAA10 Gene

Post-translational modifications for NAA10 Gene

No data available for DME Specific Peptides for NAA10 Gene

Domains & Families for NAA10 Gene

Protein Domains for NAA10 Gene

Graphical View of Domain Structure for InterPro Entry

P41227

UniProtKB/Swiss-Prot:

NAA10_HUMAN :
  • Contains 1 N-acetyltransferase domain.
  • Belongs to the acetyltransferase family. ARD1 subfamily.
Domain:
  • Contains 1 N-acetyltransferase domain.
Family:
  • Belongs to the acetyltransferase family. ARD1 subfamily.
genes like me logo Genes that share domains with NAA10: view

Function for NAA10 Gene

Molecular function for NAA10 Gene

UniProtKB/Swiss-Prot CatalyticActivity:
Acetyl-CoA + peptide = N(alpha)-acetylpeptide + CoA.
UniProtKB/Swiss-Prot Function:
Catalytic subunit of the N-terminal acetyltransferase A (NatA) complex which displays alpha (N-terminal) acetyltransferase activity. The NAT activity may be important for vascular, hematopoietic and neuronal growth and development. Without NAA15, displays epsilon (internal) acetyltransferase activity towards HIF1A, thereby promoting its degradation. Represses MYLK kinase activity by acetylation, and thus represses tumor cell migration. Acetylates, and stabilizes TSC2, thereby repressing mTOR activity and suppressing cancer development.

Enzyme Numbers (IUBMB) for NAA10 Gene

Gene Ontology (GO) - Molecular Function for NAA10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004596 contributes_to peptide alpha-N-acetyltransferase activity IDA 19480662
GO:0005515 protein binding IPI 15496142
GO:0008080 N-acetyltransferase activity TAS 7981673
GO:0016407 contributes_to acetyltransferase activity IDA 15496142
GO:0043022 contributes_to ribosome binding IDA 15496142
genes like me logo Genes that share ontologies with NAA10: view
genes like me logo Genes that share phenotypes with NAA10: view

Human Phenotype Ontology for NAA10 Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Model Products

CRISPR Products

miRNA for NAA10 Gene

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Animal Models , Transcription Factor Targets and HOMER Transcription for NAA10 Gene

Localization for NAA10 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NAA10 Gene

Cytoplasm. Nucleus. Note=Also present in the free cytosolic and cytoskeleton-bound polysomes. {ECO:0000269 PubMed:15496142}.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NAA10 Gene COMPARTMENTS Subcellular localization image for NAA10 gene
Compartment Confidence
cytosol 5
nucleus 5

Gene Ontology (GO) - Cellular Components for NAA10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IDA --
GO:0005634 nucleus IDA 15496142
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IDA 15496142
GO:0016020 membrane IDA 19946888
genes like me logo Genes that share ontologies with NAA10: view

Pathways & Interactions for NAA10 Gene

genes like me logo Genes that share pathways with NAA10: view

Pathways by source for NAA10 Gene

2 Cell Signaling Technology pathways for NAA10 Gene
1 BioSystems pathway for NAA10 Gene

Gene Ontology (GO) - Biological Process for NAA10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006323 DNA packaging TAS 7981673
GO:0006474 N-terminal protein amino acid acetylation IDA 15496142
GO:0006475 internal protein amino acid acetylation TAS 7981673
GO:0017198 N-terminal peptidyl-serine acetylation IBA --
GO:0018002 N-terminal peptidyl-glutamic acid acetylation IBA --
genes like me logo Genes that share ontologies with NAA10: view

No data available for SIGNOR curated interactions for NAA10 Gene

Drugs & Compounds for NAA10 Gene

(2) Drugs for NAA10 Gene - From: HMDB and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Coenzyme A Nutra 0

(1) Additional Compounds for NAA10 Gene - From: HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
acetyl-coa
  • Ac-CoA
  • Ac-Coenzyme A
  • Ac-S-CoA
  • Ac-S-Coenzyme A
  • Acetyl coenzyme-A
72-89-9
genes like me logo Genes that share compounds with NAA10: view

Transcripts for NAA10 Gene

Unigene Clusters for NAA10 Gene

N(alpha)-acetyltransferase 10, NatA catalytic subunit:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NAA10 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b ^ 3a · 3b · 3c ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c ^ 7a · 7b · 7c · 7d ^ 8a · 8b · 8c
SP1: - - - - - - -
SP2: - - - - - - -
SP3: - - - - - - - -
SP4: - - - - - -
SP5: - - -
SP6: - - - -
SP7: -
SP8:
SP9: - -
SP10: -

Relevant External Links for NAA10 Gene

GeneLoc Exon Structure for
NAA10
ECgene alternative splicing isoforms for
NAA10

Expression for NAA10 Gene

mRNA expression in normal human tissues for NAA10 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for NAA10 Gene

This gene is overexpressed in Breast (16.5), Nasal epithelium (7.7), and Bone marrow stromal cell (6.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for NAA10 Gene



Protein tissue co-expression partners for NAA10 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of NAA10 Gene:

NAA10

SOURCE GeneReport for Unigene cluster for NAA10 Gene:

Hs.433291

mRNA Expression by UniProt/SwissProt for NAA10 Gene:

P41227-NAA10_HUMAN
Tissue specificity: Ubiquitous.
genes like me logo Genes that share expression patterns with NAA10: view

Primer Products

No data available for mRNA differential expression in normal tissues for NAA10 Gene

Orthologs for NAA10 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for NAA10 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia NAA10 34
  • 91.26 (n)
  • 97.78 (a)
NAA10 35
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia NAA10 34
  • 90.96 (n)
  • 96 (a)
NAA10 35
  • 96 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Naa10 34
  • 91.85 (n)
  • 96 (a)
Naa10 16
Naa10 35
  • 96 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia NAA10 34
  • 99.57 (n)
  • 100 (a)
NAA10 35
  • 100 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Naa10 34
  • 91.26 (n)
  • 96 (a)
oppossum
(Monodelphis domestica)
Mammalia NAA10 35
  • 88 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 94 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia NAA10 35
  • 83 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia naa10 34
  • 76.41 (n)
  • 89.5 (a)
Str.2590 34
zebrafish
(Danio rerio)
Actinopterygii naa10 34
  • 74.69 (n)
  • 85.38 (a)
wufc66b08 34
naa10 35
  • 80 (a)
OneToMany
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.9985 34
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP005410 34
  • 71.46 (n)
  • 77.5 (a)
fruit fly
(Drosophila melanogaster)
Insecta vnc 34
  • 77.49 (n)
  • 80.89 (a)
vnc 35
  • 67 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea K07H8.3 34
  • 64.47 (n)
  • 68.13 (a)
K07H8.3 35
  • 68 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes ARD1 35
  • 43 (a)
OneToMany
ARD1 37
soybean
(Glycine max)
eudicotyledons Gma.2977 34
Alicante grape
(Vitis vinifera)
eudicotyledons Vvi.3014 34
barley
(Hordeum vulgare)
Liliopsida Hv.2338 34
rice
(Oryza sativa)
Liliopsida Os.10971 34
wheat
(Triticum aestivum)
Liliopsida Ta.5608 34
corn
(Zea mays)
Liliopsida Zm.2319 34
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.631 34
sea squirt
(Ciona savignyi)
Ascidiacea CSA.11133 35
  • 63 (a)
OneToMany
Species where no ortholog for NAA10 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)

Evolution for NAA10 Gene

ENSEMBL:
Gene Tree for NAA10 (if available)
TreeFam:
Gene Tree for NAA10 (if available)

Paralogs for NAA10 Gene

Paralogs for NAA10 Gene

(4) SIMAP similar genes for NAA10 Gene using alignment to 5 proteins:

Pseudogenes.org Pseudogenes for NAA10 Gene

genes like me logo Genes that share paralogs with NAA10: view

Variants for NAA10 Gene

Sequence variations from dbSNP and Humsavar for NAA10 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs387906701 N-terminal acetyltransferase deficiency (NATD) 153,934,388(-) GCCTT(C/T)CCTGG reference, missense
VAR_075206 N-terminal acetyltransferase deficiency (NATD)
rs1009346 -- 153,931,231(+) CTCTG(C/G)GGCCG intron-variant
rs1009347 -- 153,931,408(+) CTTGC(C/T)AGCAT intron-variant
rs1557501 -- 153,931,677(+) CTCCT(C/T)GATTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NAA10 Gene

Variant ID Type Subtype PubMed ID
esv33199 CNV gain+loss 17666407
nsv1144325 CNV deletion 24896259
nsv469867 CNV loss 16826518

Variation tolerance for NAA10 Gene

Residual Variation Intolerance Score: 24.1% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for NAA10 Gene

Human Gene Mutation Database (HGMD)
NAA10
SNPedia medical, phenotypic, and genealogical associations of SNPs for
NAA10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NAA10 Gene

Disorders for NAA10 Gene

MalaCards: The human disease database

(4) MalaCards diseases for NAA10 Gene - From: OMIM, ClinVar, GeneTests, Orphanet, Swiss-Prot, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
n-terminal acetyltransferase deficiency
  • ogden syndrome
microphthalmia, syndromic 1
  • lenz microphthalmia syndrome
cardiogenic shock
  • shock cardiogenic
microphthalmia
  • microphthalmos
- elite association - COSMIC cancer census association via MalaCards
Search NAA10 in MalaCards View complete list of genes associated with diseases

UniProtKB/Swiss-Prot

NAA10_HUMAN
  • Microphthalmia, syndromic, 1 (MCOPS1) [MIM:309800]: A rare syndrome defined by the canonical features of unilateral or bilateral microphthalmia or anophthalmia and defects in the skeletal and genitourinary systems. Microphthalmia is a disorder of eye formation, ranging from small size of a single eye to complete bilateral absence of ocular tissues (anophthalmia). In many cases, microphthalmia/anophthalmia occurs in association with syndromes that include non-ocular abnormalities. Anomalies of the digits, teeth, and ears are hallmarks of MCOPS1. Intellectual disability ranges from mild to severe, with self-mutilating behaviors and seizures in severely affected MCOPS1 individuals. {ECO:0000269 PubMed:24431331}. Note=The disease is caused by mutations affecting the gene represented in this entry.
  • N-terminal acetyltransferase deficiency (NATD) [MIM:300855]: An enzymatic deficiency resulting in postnatal growth failure with severe delays and dysmorphic features. It is clinically characterized by wrinkled forehead, prominent eyes, widely opened anterior and posterior fontanels, downsloping palpebral fissures, thickened lids, large ears, flared nares, hypoplastic alae, short columella, protruding upper lip, and microretrognathia. There are also delayed closing of fontanels and broad great toes. Skin is characterized by redundancy or laxity with minimal subcutaneous fat, cutaneous capillary malformations, and very fine hair and eyebrows. Death results from cardiogenic shock following arrhythmia. {ECO:0000269 PubMed:21700266, ECO:0000269 PubMed:26522270}. Note=The disease is caused by mutations affecting the gene represented in this entry.

Relevant External Links for NAA10

Human Genome Epidemiology (HuGE) Navigator
NAA10
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NAA10
genes like me logo Genes that share disorders with NAA10: view

No data available for Genatlas for NAA10 Gene

Publications for NAA10 Gene

  1. A synopsis of eukaryotic Nalpha-terminal acetyltransferases: nomenclature, subunits and substrates. (PMID: 19660095) Polevoda B. … Sherman F. (BMC Proc. 2009) 2 3 4 65
  2. Identification and characterization of the human ARD1-NATH protein acetyltransferase complex. (PMID: 15496142) Arnesen T. … Lillehaug J.R. (Biochem. J. 2005) 3 4 22 65
  3. Regulation and destabilization of HIF-1alpha by ARD1-mediated acetylation. (PMID: 12464182) Jeong J.-W. … Kim K.-W. (Cell 2002) 3 4 22 65
  4. Isolation of new genes in distal Xq28: transcriptional map and identification of a human homologue of the ARD1 N-acetyl transferase of Saccharomyces cerevisiae. (PMID: 7981673) Tribioli C. … Toniolo D. (Hum. Mol. Genet. 1994) 2 3 4 65
  5. A splice donor mutation in NAA10 results in the dysregulation of the retinoic acid signalling pathway and causes Lenz microphthalmia syndrome. (PMID: 24431331) Esmailpour T. … Huang T. (J. Med. Genet. 2014) 3 4 65

Products for NAA10 Gene

Sources for NAA10 Gene

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