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Aliases for MYLK-AS2 Gene

Subcategory (RNA class) for MYLK-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MYLK-AS2 Gene

  • MYLK Antisense RNA 2 2 3 5
  • MYLK Antisense RNA 2 (Non-Protein Coding) 2

External Ids for MYLK-AS2 Gene

Previous GeneCards Identifiers for MYLK-AS2 Gene

  • GC00U933855
  • GC03P123409

Summaries for MYLK-AS2 Gene

GeneCards Summary for MYLK-AS2 Gene

MYLK-AS2 (MYLK Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MYLK-AS2 Gene

Genomics for MYLK-AS2 Gene

Regulatory Elements for MYLK-AS2 Gene

Enhancers for MYLK-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G123652 1.8 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -36.1 -36115 2.3 ELF3 TBP PKNOX1 ZSCAN4 ARID4B DMAP1 ZNF48 RAD21 YY1 HSF1 MYLK MYLK-AS2 HACD2 MYLK-AS1 ROPN1 PIR59914
GH03G123656 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.5 -29.5 -29544 6.4 CTCF SIN3A RAD21 YY1 ZFHX2 POLR2A PRDM10 MAFK EGR2 HLF MYLK-AS2 MYLK HACD2 PIR59914
GH03G123716 1.2 Ensembl ENCODE dbSUPER 12.8 +29.1 29097 4.9 CTCF ZNF654 BHLHE40 TRIM22 REST ZIC2 ATF2 RAD21 ZNF121 JUND MYLK-AS2 MYLK LOC105369194 GC03P123815
GH03G123711 1 dbSUPER 13.2 +23.9 23921 4.5 PKNOX1 FOXA2 FEZF1 ZNF2 ZNF121 KLF7 ZNF488 TSHZ1 ZNF518A ZNF610 MYLK-AS2 MYLK LOC105369194 GC03P123815
GH03G123738 1.1 Ensembl ENCODE dbSUPER 11.3 +50.9 50869 3.6 JUND ZFP3 CEBPB FOS PRDM1 ZBTB40 MAFK MYLK-AS2 MYLK ENSG00000207002 LOC105369194 GC03P123815
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MYLK-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MYLK-AS2 Gene

Chromosome:
3
Start:
123,689,644 bp from pter
End:
123,692,407 bp from pter
Size:
2,764 bases
Orientation:
Plus strand

Genomic View for MYLK-AS2 Gene

Genes around MYLK-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MYLK-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MYLK-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MYLK-AS2 Gene

Proteins for MYLK-AS2 Gene

Post-translational modifications for MYLK-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MYLK-AS2 Gene

Domains & Families for MYLK-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MYLK-AS2 Gene

Function for MYLK-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MYLK-AS2 Gene

Localization for MYLK-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MYLK-AS2 Gene

Pathways & Interactions for MYLK-AS2 Gene

SuperPathways for MYLK-AS2 Gene

No Data Available

Interacting Proteins for MYLK-AS2 Gene

Gene Ontology (GO) - Biological Process for MYLK-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MYLK-AS2 Gene

Drugs & Compounds for MYLK-AS2 Gene

No Compound Related Data Available

Transcripts for MYLK-AS2 Gene

mRNA/cDNA for MYLK-AS2 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MYLK-AS2 Gene

No ASD Table

Relevant External Links for MYLK-AS2 Gene

GeneLoc Exon Structure for
MYLK-AS2
ECgene alternative splicing isoforms for
MYLK-AS2

Expression for MYLK-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MYLK-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for MYLK-AS2 Gene

This gene is overexpressed in Lung (x4.3).
genes like me logo Genes that share expression patterns with MYLK-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MYLK-AS2 Gene

Orthologs for MYLK-AS2 Gene

Evolution for MYLK-AS2 Gene

ENSEMBL:
Gene Tree for MYLK-AS2 (if available)
TreeFam:
Gene Tree for MYLK-AS2 (if available)

No data available for Orthologs for MYLK-AS2 Gene

Paralogs for MYLK-AS2 Gene

No data available for Paralogs for MYLK-AS2 Gene

Variants for MYLK-AS2 Gene

Sequence variations from dbSNP and Humsavar for MYLK-AS2 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs40305 Likely benign 123,692,742(-) GTCAC(C/T)GTGGA downstream-variant-500B, upstream-variant-2KB, reference, synonymous-codon
rs147735490 Uncertain significance 123,692,775(+) CCAGC(A/G)TCATT downstream-variant-500B, upstream-variant-2KB, reference, synonymous-codon
rs768638357 Uncertain significance 123,692,728(+) GGCAC(A/G)ACCTA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1001052474 -- 123,687,853(+) TTTTT(A/G)TAGAG intron-variant, upstream-variant-2KB
rs1002633619 -- 123,690,114(+) CCAGT(C/G)TGAAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MYLK-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv460837 CNV gain 19166990
nsv591428 CNV gain 21841781
nsv829708 CNV gain 17160897
nsv829709 CNV loss 17160897
nsv829710 CNV gain 17160897

Relevant External Links for MYLK-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MYLK-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MYLK-AS2 Gene

Disorders for MYLK-AS2 Gene

Relevant External Links for MYLK-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MYLK-AS2

No disorders were found for MYLK-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MYLK-AS2 Gene

Publications for MYLK-AS2 Gene

No publications were found for MYLK-AS2 Gene.

Products for MYLK-AS2 Gene

Sources for MYLK-AS2 Gene

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