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Aliases for MYL4 Gene

Aliases for MYL4 Gene

  • Myosin, Light Chain 4, Alkali; Atrial, Embryonic 2 3
  • Myosin, Light Polypeptide 4, Alkali; Atrial, Embryonic 2 3
  • Myosin Light Chain 1, Embryonic Muscle/Atrial Isoform 3 4
  • Myosin Light Chain Alkali GT-1 Isoform 3 4
  • Myosin, Atrial/Fetal Muscle, Light Chain 3
  • Atrial/Fetal Muscle 2
  • Light Chain 2
  • PRO1957 3
  • Myosin 2
  • ALC1 3
  • AMLC 3
  • MLC1 4
  • GT1 3

External Ids for MYL4 Gene

Previous GeneCards Identifiers for MYL4 Gene

  • GC17P044784
  • GC17P047685
  • GC17P045619
  • GC17P045761
  • GC17P042641
  • GC17P045286
  • GC17P040664

Summaries for MYL4 Gene

Entrez Gene Summary for MYL4 Gene

  • Myosin is a hexameric ATPase cellular motor protein. It is composed of two myosin heavy chains, two nonphosphorylatable myosin alkali light chains, and two phosphorylatable myosin regulatory light chains. This gene encodes a myosin alkali light chain that is found in embryonic muscle and adult atria. Two alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

GeneCards Summary for MYL4 Gene

MYL4 (Myosin, Light Chain 4, Alkali; Atrial, Embryonic) is a Protein Coding gene. Diseases associated with MYL4 include congenital disorder of glycosylation, type iid and aortic valve disease 2. Among its related pathways are RhoGDI Pathway and Activation of cAMP-Dependent PKA. GO annotations related to this gene include calcium ion binding and actin monomer binding. An important paralog of this gene is MYL1.

UniProtKB/Swiss-Prot for MYL4 Gene

  • Regulatory light chain of myosin. Does not bind calcium

Tocris Summary for MYL4 Gene

  • Myosins are a large family of motor proteins that share the common features of ATP hydrolysis (ATPase enzyme activity), actin binding and potential for kinetic energy transduction. Originally isolated from muscle cells, almost all eukaryotic cells are known to contain myosins.

Gene Wiki entry for MYL4 Gene

No data available for PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MYL4 Gene

Genomics for MYL4 Gene

Regulatory Elements for MYL4 Gene

Genomic Location for MYL4 Gene

Chromosome:
17
Start:
47,200,446 bp from pter
End:
47,227,697 bp from pter
Size:
27,252 bases
Orientation:
Plus strand

Genomic View for MYL4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for MYL4 Gene

Proteins for MYL4 Gene

  • Protein details for MYL4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P12829-MYL4_HUMAN
    Recommended name:
    Myosin light chain 4
    Protein Accession:
    P12829
    Secondary Accessions:
    • D3DXJ7
    • P11783

    Protein attributes for MYL4 Gene

    Size:
    197 amino acids
    Molecular mass:
    21565 Da
    Quaternary structure:
    • Myosin is a hexamer of 2 heavy chains and 4 light chains

neXtProt entry for MYL4 Gene

Proteomics data for MYL4 Gene at MOPED

Post-translational modifications for MYL4 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for MYL4 Gene

Domains & Families for MYL4 Gene

Gene Families for MYL4 Gene

Protein Domains for MYL4 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for MYL4 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P12829

UniProtKB/Swiss-Prot:

MYL4_HUMAN :
  • Contains 3 EF-hand domains.
Domain:
  • Contains 3 EF-hand domains.
genes like me logo Genes that share domains with MYL4: view

Function for MYL4 Gene

Molecular function for MYL4 Gene

GENATLAS Biochemistry:
myosin,light polypeptide 4,alkali,atrial,skeletal,embryonic,same as MLC1-A & MLC1-EMB
UniProtKB/Swiss-Prot Function:
Regulatory light chain of myosin. Does not bind calcium

Gene Ontology (GO) - Molecular Function for MYL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003785 actin monomer binding IDA 9180271
GO:0005509 calcium ion binding IEA --
GO:0032038 myosin II heavy chain binding NAS 16675844
GO:0051015 actin filament binding IMP 9738905
genes like me logo Genes that share ontologies with MYL4: view

Phenotypes for MYL4 Gene

genes like me logo Genes that share phenotypes with MYL4: view

Animal Model Products

miRNA for MYL4 Gene

miRTarBase miRNAs that target MYL4

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MYL4

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targets and HOMER Transcription for MYL4 Gene

Localization for MYL4 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MYL4 Gene COMPARTMENTS Subcellular localization image for MYL4 gene
Compartment Confidence
cytosol 4
cytoskeleton 3
chloroplast 1

Gene Ontology (GO) - Cellular Components for MYL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005829 cytosol TAS --
GO:0016459 myosin complex IEA --
GO:0031672 A band IMP 14985854
genes like me logo Genes that share ontologies with MYL4: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for MYL4 Gene

Pathways & Interactions for MYL4 Gene

genes like me logo Genes that share pathways with MYL4: view

Interacting Proteins for MYL4 Gene

Gene Ontology (GO) - Biological Process for MYL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002026 regulation of the force of heart contraction IMP 16675844
GO:0030049 muscle filament sliding TAS --
GO:0032781 positive regulation of ATPase activity IMP 9738905
GO:0060048 cardiac muscle contraction IMP 14985854
genes like me logo Genes that share ontologies with MYL4: view

No data available for SIGNOR curated interactions for MYL4 Gene

Drugs & Compounds for MYL4 Gene

(1) Drugs for MYL4 Gene - From: HMDB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Calcium Nutra 0

(5) Additional Compounds for MYL4 Gene - From: NovoSeek and Tocris

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
(+-)-Blebbistatin
674289-55-5
(R)-(+)-Blebbistatin
1177356-70-5
(S)-(-)-Blebbistatin
856925-71-8
BTS
1576-37-0
Creatinine
  • 1-Methylglycocyamidine
  • 1-Methylhydantoin-2-imide
  • 2-Amino-1-methyl-1,5-dihydroimidazol-4-one
  • 2-Amino-1-methylimidazolin-4-one
  • Creatine anhydride
60-27-5
genes like me logo Genes that share compounds with MYL4: view

Transcripts for MYL4 Gene

Unigene Clusters for MYL4 Gene

Myosin, light chain 4, alkali; atrial, embryonic:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MYL4

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MYL4 Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b · 6c ^ 7 ^ 8a · 8b ^ 9
SP1: - - -
SP2: - -
SP3: -
SP4: - -
SP5:
SP6: - - - -
SP7: -

Relevant External Links for MYL4 Gene

GeneLoc Exon Structure for
MYL4
ECgene alternative splicing isoforms for
MYL4

Expression for MYL4 Gene

mRNA expression in normal human tissues for MYL4 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for MYL4 Gene

This gene is overexpressed in Heart - Atrial Appendage (x49.6).

Protein differential expression in normal tissues from HIPED for MYL4 Gene

This gene is overexpressed in Fetal heart (39.6), Prostate (15.3), and Heart (9.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for MYL4 Gene



SOURCE GeneReport for Unigene cluster for MYL4 Gene Hs.463300

genes like me logo Genes that share expression patterns with MYL4: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MYL4 Gene

Orthologs for MYL4 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for MYL4 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia MYL4 35
  • 93.05 (n)
  • 97.55 (a)
MYL4 36
  • 90 (a)
OneToOne
dog
(Canis familiaris)
Mammalia MYL4 35
  • 92.45 (n)
  • 99.37 (a)
MYL4 36
  • 63 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Myl4 35
  • 89.94 (n)
  • 95.6 (a)
Myl4 16
Myl4 36
  • 91 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia MYL4 35
  • 99.58 (n)
  • 99.37 (a)
MYL4 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Myl4 35
  • 89.52 (n)
  • 95.6 (a)
oppossum
(Monodelphis domestica)
Mammalia MYL4 36
  • 95 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MYL4 36
  • 74 (a)
OneToOne
chicken
(Gallus gallus)
Aves MYL4 35
  • 80.92 (n)
  • 88.05 (a)
MYL4 36
  • 85 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia MYL4 36
  • 85 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia myl4 35
  • 75.89 (n)
  • 86.79 (a)
Str.7898 35
zebrafish
(Danio rerio)
Actinopterygii myl4 35
  • 73.17 (n)
  • 83.02 (a)
cmlc1 36
  • 77 (a)
OneToMany
myl4 36
  • 83 (a)
OneToMany
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.7231 35
fruit fly
(Drosophila melanogaster)
Insecta Mlc-c 37
  • 53 (a)
Mlc-c 36
  • 52 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea T12D8.6 37
  • 46 (a)
mlc-5 36
  • 48 (a)
ManyToMany
mlc-6 36
  • 47 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes MLC1 36
  • 36 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.211 36
  • 60 (a)
ManyToMany
CSA.4806 36
  • 46 (a)
ManyToMany
CSA.6288 36
  • 47 (a)
ManyToMany
CSA.6678 36
  • 46 (a)
ManyToMany
Species with no ortholog for MYL4:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for MYL4 Gene

ENSEMBL:
Gene Tree for MYL4 (if available)
TreeFam:
Gene Tree for MYL4 (if available)

Paralogs for MYL4 Gene

Paralogs for MYL4 Gene

(11) SIMAP similar genes for MYL4 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with MYL4: view

Variants for MYL4 Gene

Sequence variations from dbSNP and Humsavar for MYL4 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs4784 -- 47,222,440(+) CAATG(G/T)CTGCA reference, missense
rs10930 -- 47,223,523(+) CCTTG(G/T)CTTTA utr-variant-3-prime, intron-variant
rs13589 -- 47,221,782(+) GAGGG(C/T)CTGCG reference, synonymous-codon
rs14793 -- 47,209,486(+) ctcca(G/T)cccct reference, missense
rs867859 -- 47,221,042(+) GTCCT(A/G)TGTGC intron-variant

Variation tolerance for MYL4 Gene

Residual Variation Intolerance Score: 66.45% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.63; 31.30% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MYL4 Gene

HapMap Linkage Disequilibrium report
MYL4
Human Gene Mutation Database (HGMD)
MYL4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MYL4 Gene

Disorders for MYL4 Gene

MalaCards: The human disease database

(2) MalaCards diseases for MYL4 Gene - From: OMIM, DISEASES, and NovoSeek

Disorder Aliases PubMed IDs
congenital disorder of glycosylation, type iid
  • congenital disorder of glycosylation 2d
aortic valve disease 2
  • aortic valve stenosis
- elite association
Search MYL4 in MalaCards View complete list of genes associated with diseases

Relevant External Links for MYL4

Genetic Association Database (GAD)
MYL4
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MYL4
genes like me logo Genes that share disorders with MYL4: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MYL4 Gene

Publications for MYL4 Gene

  1. The myosin light chain 1 isoform associated with masticatory myosin heavy chain in mammals and reptiles is embryonic/atrial MLC1. (PMID: 20435813) Reiser P.J. … Quan N. (J. Exp. Biol. 2010) 23 67
  2. Cardiac dysfunction in an animal model of neonatal asphyxia is associated with increased degradation of MLC1 by MMP-2. (PMID: 19452190) Doroszko A. … Sawicki G. (Basic Res. Cardiol. 2009) 23 67
  3. Masticatory (;superfast') myosin heavy chain and embryonic/atrial myosin light chain 1 in rodent jaw-closing muscles. (PMID: 19648394) Reiser P.J. … Quan N. (J. Exp. Biol. 2009) 23 67
  4. Rab11A-controlled assembly of the inner membrane complex is required for completion of apicomplexan cytokinesis. (PMID: 19165333) Agop-Nersesian C. … Langsley G. (PLoS Pathog. 2009) 23 67
  5. Hedgehog-independent overexpression of transforming growth factor-beta1 in rhabdomyosarcoma of Patched1 mutant mice. (PMID: 17611698) EichenmA1ller M. … Kappler R. (Int. J. Oncol. 2007) 23 67

Products for MYL4 Gene

Sources for MYL4 Gene

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