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Aliases for MYCNUT Gene

Subcategory (RNA class) for MYCNUT Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MYCNUT Gene

  • MYCN Upstream Transcript (Non-Protein Coding) 2 3 5
  • MYCN Upstream Neighbor 2 3
  • LncUSMycN 3
  • MYCNUN 3

External Ids for MYCNUT Gene

Previous HGNC Symbols for MYCNUT Gene

  • MYCNUN

Summaries for MYCNUT Gene

GeneCards Summary for MYCNUT Gene

MYCNUT (MYCN Upstream Transcript (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MYCNUT Gene

Genomics for MYCNUT Gene

Genomic Location for MYCNUT Gene

Chromosome:
2
Start:
15,920,399 bp from pter
End:
15,936,018 bp from pter
Size:
15,620 bases
Orientation:
Plus strand

Genomic View for MYCNUT Gene

Genes around MYCNUT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MYCNUT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MYCNUT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MYCNUT Gene

No data available for Regulatory Elements for MYCNUT Gene

Proteins for MYCNUT Gene

Post-translational modifications for MYCNUT Gene

No Post-translational modifications

No data available for DME Specific Peptides for MYCNUT Gene

Domains & Families for MYCNUT Gene

Gene Families for MYCNUT Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MYCNUT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MYCNUT Gene

Function for MYCNUT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MYCNUT Gene

Localization for MYCNUT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MYCNUT Gene

Pathways & Interactions for MYCNUT Gene

SuperPathways for MYCNUT Gene

No Data Available

Interacting Proteins for MYCNUT Gene

Gene Ontology (GO) - Biological Process for MYCNUT Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MYCNUT Gene

Drugs & Compounds for MYCNUT Gene

No Compound Related Data Available

Transcripts for MYCNUT Gene

mRNA/cDNA for MYCNUT Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MYCNUT Gene

No ASD Table

Relevant External Links for MYCNUT Gene

GeneLoc Exon Structure for
MYCNUT
ECgene alternative splicing isoforms for
MYCNUT

Expression for MYCNUT Gene

mRNA expression in normal human tissues for MYCNUT Gene

genes like me logo Genes that share expression patterns with MYCNUT: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MYCNUT Gene

Orthologs for MYCNUT Gene

Evolution for MYCNUT Gene

ENSEMBL:
Gene Tree for MYCNUT (if available)
TreeFam:
Gene Tree for MYCNUT (if available)

No data available for Orthologs for MYCNUT Gene

Paralogs for MYCNUT Gene

No data available for Paralogs for MYCNUT Gene

Variants for MYCNUT Gene

Sequence variations from dbSNP and Humsavar for MYCNUT Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1863803 -- 15,922,291(+) GAGCG(C/T)GGTGC intron-variant
rs1863804 -- 15,922,341(+) CTGAC(C/G)CACTT intron-variant
rs3086536 -- 15,930,460(+) aaaaa(-/AA)ttagc intron-variant
rs3796001 -- 15,921,347(-) ATGTG(C/T)GACTT intron-variant
rs6704760 -- 15,929,552(+) AATTT(A/T)AAAAA intron-variant

Relevant External Links for MYCNUT Gene

HapMap Linkage Disequilibrium report
MYCNUT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MYCNUT Gene

Disorders for MYCNUT Gene

Relevant External Links for MYCNUT

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MYCNUT

No disorders were found for MYCNUT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MYCNUT Gene

Publications for MYCNUT Gene

  1. Effects of a novel long noncoding RNA, lncUSMycN, on N-Myc expression and neuroblastoma progression. (PMID: 24906397) Liu P.Y. … Liu T. (J. Natl. Cancer Inst. 2014) 2 3 67
  2. Generation and analysis of 280,000 human expressed sequence tags. (PMID: 8889549) Hillier L.D. … Marra M. (Genome Res. 1996) 3

Products for MYCNUT Gene

Sources for MYCNUT Gene

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