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Aliases for MYCLP1 Gene

Aliases for MYCLP1 Gene

  • MYCL Pseudogene 1 2 3 5
  • V-Myc Avian Myelocytomatosis Viral Oncogene Homolog 1 Pseudogene 1 2 3
  • V-Myc Avian Myelocytomatosis Viral Oncogene Homolog 2 2 3
  • MYCL1P1 3 4
  • MYCL2 3 4
  • V-Myc Myelocytomatosis Viral Oncogene Homolog 1 Pseudogene 1 3
  • V-Myc Myelocytomatosis Viral Oncogene Homolog Pseudogene 1 4
  • V-Myc Myelocytomatosis Viral Oncogene Homolog 2 3
  • MYCL-Related Processed 3
  • Protein L-Myc-2 4
  • BHLHe38 3
  • L-MYC2 3

External Ids for MYCLP1 Gene

Previous HGNC Symbols for MYCLP1 Gene

  • MYCL2
  • MYCL1P1

Previous GeneCards Identifiers for MYCLP1 Gene

  • GC0XP106516

Summaries for MYCLP1 Gene

GeneCards Summary for MYCLP1 Gene

MYCLP1 (MYCL Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MYCLP1 Gene

Genomics for MYCLP1 Gene

Regulatory Elements for MYCLP1 Gene

Enhancers for MYCLP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF107448 1.5 FANTOM5 Ensembl ENCODE 16.2 +177.7 177737 2.8 GLI4 ZNF2 GLIS2 KLF7 ZNF548 ZNF263 SP3 YY2 TSHZ1 PPARG DNAJA1P3 MYCLP1 TEX13B RNF128 FRMPD3 KRT18P49
GH0XF107205 1 ENCODE 7.7 -66.4 -66403 1.9 ATF1 PKNOX1 ARID4B SIN3A FOS SP3 NFYC REST MBD2 MEF2D MYCLP1 ENSG00000199832 NUP62CL
GH0XF107134 1.1 Ensembl ENCODE 7 -136.0 -136046 3.4 SOX13 TBP GTF2E2 ETV1 JUN ZNF175 GTF3C2 ZNF316 TRIM24 ZNF584 NUP62CL PIH1D3 FRMPD3 MYCLP1 LOC644563 GC0XM107132
GH0XF107154 1 Ensembl ENCODE 7 -117.0 -117025 1.9 CTCF PKNOX1 ZNF175 RAD21 ZKSCAN1 ZNF324 ZFHX2 POLR2A ZBTB48 ZSCAN29 RBM41 FRMPD3 MYCLP1 GC0XM107132 GC0XP107200 GC0XP107201
GH0XF107117 0.9 ENCODE 7 -153.9 -153903 2.0 TBP PKNOX1 ATF1 ZNF76 SIN3A ZNF2 ETS1 YY1 ZNF143 FOS MID2 FRMPD3 MYCLP1 RNF128 RBM41 PIR50761
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MYCLP1 on UCSC Golden Path with GeneCards custom track

Promoters for MYCLP1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001918210 236 600 CTCF ZNF366 NRF1 RAD21

Genomic Location for MYCLP1 Gene

Chromosome:
X
Start:
107,272,464 bp from pter
End:
107,276,559 bp from pter
Size:
4,096 bases
Orientation:
Plus strand

Genomic View for MYCLP1 Gene

Genes around MYCLP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MYCLP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MYCLP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MYCLP1 Gene

Proteins for MYCLP1 Gene

  • Protein details for MYCLP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P12525-MYCP1_HUMAN
    Recommended name:
    Putative myc-like protein MYCLP1
    Protein Accession:
    P12525
    Secondary Accessions:
    • O43372

    Protein attributes for MYCLP1 Gene

    Size:
    358 amino acids
    Molecular mass:
    40868 Da
    Quaternary structure:
    • Efficient DNA binding requires dimerization with another bHLH protein. Binds DNA as a heterodimer with MAX (By similarity).
    SequenceCaution:
    • Sequence=AAA59883.1; Type=Frameshift; Positions=40, 44, 58; Evidence={ECO:0000305};

neXtProt entry for MYCLP1 Gene

Post-translational modifications for MYCLP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MYCLP1 Gene

Domains & Families for MYCLP1 Gene

Suggested Antigen Peptide Sequences for MYCLP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P12525

UniProtKB/Swiss-Prot:

MYCP1_HUMAN :
  • Contains 1 bHLH (basic helix-loop-helix) domain.
Domain:
  • Contains 1 bHLH (basic helix-loop-helix) domain.
genes like me logo Genes that share domains with MYCLP1: view

No data available for Gene Families for MYCLP1 Gene

Function for MYCLP1 Gene

genes like me logo Genes that share phenotypes with MYCLP1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MYCLP1 Gene

Localization for MYCLP1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MYCLP1 Gene

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MYCLP1 Gene

Pathways & Interactions for MYCLP1 Gene

SuperPathways for MYCLP1 Gene

No Data Available

Interacting Proteins for MYCLP1 Gene

Gene Ontology (GO) - Biological Process for MYCLP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MYCLP1 Gene

Transcripts for MYCLP1 Gene

mRNA/cDNA for MYCLP1 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MYCLP1 Gene

No ASD Table

Relevant External Links for MYCLP1 Gene

GeneLoc Exon Structure for
MYCLP1
ECgene alternative splicing isoforms for
MYCLP1

Expression for MYCLP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MYCLP1 Gene

mRNA differential expression in normal tissues according to GTEx for MYCLP1 Gene

This gene is overexpressed in Testis (x52.3).

NURSA nuclear receptor signaling pathways regulating expression of MYCLP1 Gene:

MYCLP1

mRNA Expression by UniProt/SwissProt for MYCLP1 Gene:

P12525-MYCP1_HUMAN
Tissue specificity: Detected in adult testis.
genes like me logo Genes that share expression patterns with MYCLP1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for MYCLP1 Gene

Orthologs for MYCLP1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MYCLP1 Gene

Organism Taxonomy Gene Similarity Type Details
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.11490 34
African clawed frog
(Xenopus laevis)
Amphibia MGC52906 34
Species where no ortholog for MYCLP1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MYCLP1 Gene

ENSEMBL:
Gene Tree for MYCLP1 (if available)
TreeFam:
Gene Tree for MYCLP1 (if available)

Paralogs for MYCLP1 Gene

(2) SIMAP similar genes for MYCLP1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with MYCLP1: view

No data available for Paralogs for MYCLP1 Gene

Variants for MYCLP1 Gene

Relevant External Links for MYCLP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MYCLP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MYCLP1 Gene

Disorders for MYCLP1 Gene

No disorders were found for MYCLP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MYCLP1 Gene

Publications for MYCLP1 Gene

  1. Testis-specific expression of the human MYCL2 gene. (PMID: 1711681) Robertson N.G. … Morton C.C. (Nucleic Acids Res. 1991) 3 4 64
  2. Mapping and characterization of an X-linked processed gene related to MYCL1. (PMID: 2541066) Morton C.C. … Shows T.B. (Genomics 1989) 3 4 64
  3. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 4 64
  4. Phylogenetic analysis of the human basic helix-loop-helix proteins. (PMID: 12093377) Ledent V. … Vervoort M. (Genome Biol. 2002) 3 64
  5. Mapping of the MYCL2 processed gene to Xq22-23 and identification of an additional L MYC-related sequence in Xq27.2. (PMID: 10100857) Redolfi E. … Zucchi I. (FEBS Lett. 1999) 3 64

Products for MYCLP1 Gene

Sources for MYCLP1 Gene

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