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Aliases & Descriptions for MYC
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases MRTL 2 bHLHe39 1 , 2 c-Myc 1 , 2 , 3
Descriptions Transcription factor p64 3 avian myelocytomatosis viral oncogene homolog 2 myc proto-oncogene protein 2 myc-related translation/localization regulatory factor 2 v-myc avian myelocytomatosis viral oncogene homolog 1 , 2 v-myc myelocytomatosis viral oncogene homolog (avian) 2
Search outside databases for aliases for MYC genePrevious GC identifers: GC08P127757 GC08P128836 GC08P128419 GC08P128705
Summaries for MYC (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for MYC : The protein encoded by this gene is a multifunctional, nuclear phosphoprotein that plays a role incell cycle progression, apoptosis and cellular transformation. It functions as a transcriptionfactor that regulates transcription of specific target genes. Mutations, overexpression,rearrangement and translocation of this gene have been associated with a variety of hematopoietictumors, leukemias and lymphomas, including Burkitt lymphoma. There is evidence to show thatalternative translation initiations from an upstream, in-frame non-AUG (CUG) and a downstream AUGstart site result in the production of two isoforms with distinct N-termini. The synthesis ofnon-AUG initiated protein is suppressed in Burkitt's lymphomas, suggesting its importance inthe normal function of this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: MYC_HUMAN, P01106 Function : Participates in the regulation of gene transcription. Binds DNA both in a non-specificmanner and also specifically to recognizes the core sequence 5'-CAC[GA]TG-3'. Seems to activatethe transcription of growth-related genes
Gene Wiki entry for MYC (Myc)
Genomic Location for MYC
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the MYC gene Entrez Gene cytogenetic band: 8q24.21 Ensembl cytogenetic band: 8q24.21 HGNC cytogenetic band: 8q24 MYC Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 8 GeneLoc Exon Structure
GeneLoc location for GC08P128817:
(about GC identifiers )
Start:
128,816,862 bp from pter
End:
128,822,856 bp from pter
Size:
5,995 bases
Orientation:
plus strand
Proteins for MYC
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MYC_HUMAN, P01106 (See
protein sequence )Recommended Name: Myc proto-oncogene protein Size : 439 amino acids; 48804 Da
Subunit : Efficient DNA binding requires dimerization with another bHLH protein. Binds DNA as aheterodimer with MAX. Interacts with TAF1C and SPAG9. Interacts with PARP10. Interacts with KDM5Aand KDM5B
Subcellular location : Nucleus
Sequence caution : Sequence=BAA01374.2; Type=Erroneous gene model prediction;
PDB structures from and Proteopedia : 1A93 (3D)
 1EE4 (3D)
 1MV0 (3D)
 1NKP (3D)
 2A93 (3D)
 
Secondary accessions : P01107 Q14026
Post-translational modifications:
Phosphorylated by PRKDC1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_002458.2 ENSEMBL proteins: ENSP00000259523 ENSP00000367207 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: MYC 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for MYC: Invitrogen Antibodies for MYC Millipore Mono- and Polyclonal Antibodies for the study of MYC Sigma-Aldrich Antibody Arrays and Antibodies for MYC R&D Systems Antibodies for MYC (c-Myc) Cell Signaling Technology (CST) Antibodies for MYC   (c-Myc) Antibodies from Abcam (c-Myc ), each with their Abpromise SM Monoclonal and Polyclonal Antibodies from Abnova (MYC ) Novus Biologicals Antibodies for MYC
Assays for MYC:
Protein
Domains/ Families for MYC(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P01106 ProtoNet protein and cluster: P01106
3 Blocks protein families : IPB001092 Basic helix-loop-helix dimerization domain bHLH IPB002418 Myc proto-oncogene signature IPB003327 Leucine zipper UniProtKB/Swiss-Prot: MYC_HUMAN, P01106 Similarity : Contains 1 basic helix-loop-helix (bHLH) domain
Gene Function for MYC
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (MYC ) Millipore RNAi Products for the Analysis of MYC Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (MYC )
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002467 Applied Biosystems Silencer ® siRNAs for MYC Sigma-Aldrich siRNA for MYC Sigma-Aldrich shRNA Panels and shRNA for MYC Explore Sigma-Aldrich super-pooled esiRNAs               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002467                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002467                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_002467  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002467 UniProtKB/Swiss-Prot: MYC_HUMAN, P01106 Function : Participates in the regulation of gene transcription. Binds DNA both in a non-specificmanner and also specifically to recognizes the core sequence 5'-CAC[GA]TG-3'. Seems to activatethe transcription of growth-related genes
Genatlas biochemistry entry for MYC :Avian myelocytomatosis viral (v-myc). Oncogene homolog,erythropoietin early responsegene,interacting with various cellular factors including MAX,YY1,AMPHL, for binding E boxrecognition sites,stimulating genes required for proliferation,also inducing apoptosis insensitive cells,involved in lymphomagenesis (diffuse large B cell lymphoma)
15/24 MGI mutant phenotypes (inferred from 16 alleles ) (MGI details for Myc) (see all 24
):4 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for MYC
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/18 Sigma-Aldrich "Your Favorite Gene" Pathways for MYC (Your Favorite Gene powered by Ingenuity) (see all 18
) Gene Network CentralTM Interacting Genes and Proteins Network for MYC 5/393 Interacting proteins for MYC (ENSP00000367207 3 P01106 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 393
)About this table 5/24 Gene Ontology (GO) biological process terms (links to tree view) (see all 24
):
GO ID Qualified GO term Evidence PubMed IDs GO:0001783 B cell apoptosis
IEA -- GO:0001836 release of cytochrome c from mitochondria
IEA -- GO:0006006 glucose metabolic process
IEA -- GO:0006309 DNA fragmentation during apoptosis
IEA -- GO:0006352 transcription initiation
IEA --
About this table
Drugs & Compounds for MYC (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for MYC
Browse Tocris compounds for MYC 10/37 Novoseek chemical compound relationships for MYC gene (see all 37
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
ornithine
61.65
86
9683527 (3), 11306486 (2), 8297793 (2), 11598794 (2) (see all 66 )
tyrosine
55.02
95
7642726 (5), 14634284 (3), 8790838 (3), 11960624 (2) (see all 70 )
cb 33
54.06
2
10891489 (1), 11598121 (1)
thymidine
53.82
55
2187953 (3), 2105952 (2), 1709176 (2), 19149928 (2) (see all 35 )
12-o-tetradecanoylphorbol 13-acetate
51.48
54
1688464 (3), 10511314 (3), 8518229 (3), 9301678 (2) (see all 26 )
delta 7-pga1
47.52
2
8862010 (2)
oligonucleotide
45.77
91
7923012 (10), 7647959 (7), 1485890 (3), 1855215 (3) (see all 43 )
leucine
44.40
52
7577944 (3), 7727380 (3), 8423990 (2), 11891322 (2) (see all 41 )
bryostatin 1
43.51
16
9337072 (3), 8870649 (3), 10918054 (2), 9770354 (1) (see all 7 )
wp631
43.15
5
11960601 (2), 11172687 (2)
About this table
Transcripts for MYC(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (MYC ) Millipore RNAi Products for the Analysis of MYC Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (MYC )
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002467 Sigma-Aldrich siRNA for MYC Sigma-Aldrich shRNA Panels and shRNA for MYC Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_002467
REFSEQ mRNAs for MYC gene: NM_002467.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002467
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002467                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002467                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_002467  
24/246 AceView cDNA sequences (see all 246
):BM832775 BX110338 CR609560 BU507458 BQ433670 M13930 W87741 X66258 CA446124 BC000141 CR618399 BF063312 BQ632551 BC000917 BQ225726 M13929 AI278350 AW675223 BF001576 BM742710 AA514409 BC058901 AL047400 NM_002467
highest scoring ESTs for MYC :V00568 AA235530 AA304930 AA344094 AA464600 AA477744 AA477850 AA514409 AA527483 AA550843 GeneLoc Exon Structure 2 Alternative Splicing Database (ASD) splice patterns (SP) for MYC ExUns: 1a · 1b ^ 2a · 2b ^ 3 SP1 :           SP2 :          
About this scheme ECgene alternative splicing isoforms for MYC 2 Ensembl transcripts including schematic representations : ENST00000259523
ENST00000377970
Expression for MYC
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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MYC expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for MYC 1 / 2 / 3
6 probe-sets matching MYC gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: ATCAAATGCAExpression variation in blood from EXPOLDB for MYC
Orthologs for MYC
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for MYC gene from 5/10 species (see all 10
)
About this table Species with no ortholog for MYC ENSEMBL Gene Tree for MYC Paralogs for MYC (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for MYC gene MYCL2 2 MYCN 2 MYCL1 2
SNPs/Variants for MYC (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for MYC (up to first 250kb)
Disorders & Mutations for MYC
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 190080 disorders : 113970 UniProtKB/Swiss-Prot: MYC_HUMAN, P01106
Overexpression of MYC is implicated in the etiology of a variety of hematopoietic tumors A chromosomal aberration involving MYC may be a cause of a form of B-cell chroniclymphocytic leukemia. Translocation t(8;12)(q24;q22) with BTG1
10/91 Novoseek disease relationships for MYC gene (see all 91
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
burkitt lymphoma
84.49
253
7558417 (5), 2307371 (5), 1945409 (5), 10713166 (5) (see all 99 )
tumors
79.08
1640
11526483 (7), 12769686 (6), 17906696 (5), 17664422 (5) (see all 99 )
cancer
71.18
506
18221043 (5), 16856965 (4), 18197790 (3), 11467449 (3) (see all 99 )
retinoblastoma
70.34
81
7609100 (4), 1865909 (2), 8959329 (2), 1309437 (2) (see all 65 )
lymphoma
67.79
222
11431360 (6), 8919541 (4), 9196434 (4), 2200538 (4) (see all 99 )
lymphoma b-cell
66.83
58
12594230 (4), 8062825 (2), 11182042 (2), 17701581 (2) (see all 43 )
myeloid leukemia
66.60
28
7500645 (2), 8810318 (1), 1901940 (1), 16185479 (1) (see all 24 )
leukemia
64.85
155
16855632 (5), 7739203 (5), 11734062 (4), 8260894 (3) (see all 91 )
neoplastic transformation
63.76
24
2233723 (1), 10409758 (1), 7574421 (1), 11270800 (1) (see all 22 )
breast cancer
63.66
306
17052904 (5), 11948489 (4), 15757889 (4), 16202165 (4) (see all 99 )
About this table 1 PharmGKB disease relationship for MYC gene About this table Genatlas disease: MYC Burkitt lymphoma/acute lymphoblastic leukemia,B cell,with translocationst(8;14)(q24;q32),t(2;8)(p12;q24),t(8;22)(q24;q11); (see also BVR1,PVT1) Human Gene Mutation Database : MYC Genetic Association Database: MYC Human Genome Epidemiology Navigator: MYC (39 documents) Tumor Gene Database : MYC Breast Cancer Gene Database : MYC
Medical News for MYC (Possibly Related Articles in
Doctor's Guide )
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Publications for MYC (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/3239 PubMed articles for MYC gene (see all 3239
): Six lysine residues on c-Myc are direct substrates for acetylation by p300. (PubMed id 16126174) 1, 3, 4 Zhang K.... Martinez E. (2005) Insights into the mechanism of heterodimerization from the 1H-NMR solution structure of the c-Myc-Max heterodimeric leucine zipper. (PubMed id 9680483) 1, 3, 4 Lavigne P.... Sykes B.D. (1998) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 3, 4 Olsen J.V....Mann M. (2006) c-Myc binds to human ribosomal DNA and stimulates transcription of rRNA genes by RNA polymerase I. (PubMed id 15723054) 3, 4 Grandori C.... White R.J. (2005) Effects of dietary intake and genetic factors on hypermethylation of the hMLH1 gene promoter in gastric cancer. (PubMed id 15991278) 3, 6 Nan H.M....Kim H. (2005) PARP-10, a novel Myc-interacting protein with poly(ADP-ribose) polymerase activity, inhibits transformation. (PubMed id 15674325) 3, 4 Yu M.... Luescher B. (2005) c-MYC Asn11Ser is associated with increased risk for familial breast cancer. (PubMed id 15929079) 3, 6 Wirtenberger M....Burwinkel B. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) c-Raf kinase binds to N-terminal domain of c-Myc. (PubMed id 9315742) 3, 4 Alexandrov I....Alexandrova N. (1997) c-Myc is glycosylated at threonine 58, a known phosphorylation site and a mutational hot spot in lymphomas. (PubMed id 7642555) 3, 4 Chou T.-Y.... Dang C.V. (1995)
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Genome Databases showing MYC
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing MYC
(According to HUGE )
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--
Specialized Databases showing MYC (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for MYC (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for MYC:
Antibodies & Assays for MYC   (c-Myc)
Search Tocris compounds for MYC
Antibodies for MYC
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009