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Aliases & Descriptions for MYB
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases C-myb 3 Cmyb 2 OTTHUMP00000017258 2 c-myb 1 , 2 c-myb10A_CDS 2 c-myb13A_CDS 2 c-myb14A_CDS 2 c-myb8B_CDS 2 c-myb_CDS 2 efg 2
Descriptions c-myb protein (140 AA) 2 v-myb avian myeloblastosis viral oncogene homolog 1 v-myb myeloblastosis viral oncogene homolog 2 v-myb myeloblastosis viral oncogene homolog (avian) 2
Search outside databases for aliases for MYB genePrevious GC identifers: GC06P135125 GC06P135349 GC06P135483
Summaries for MYB (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for MYB : This gene encodes a transcription factor that is a member of the MYB family of transcription factorgenes. The protein contains three domains, an N-terminal DNA-binding domain, a centraltranscriptional activation domain and a C-terminal domain involved in transcriptional repression.This protein plays an essential role in the regulation of hematopoiesis and may play role intumorigenesis. Alternative splicing results in multiple transcript variants. [provided by RefSeq] UniProtKB/Swiss-Prot: MYB_HUMAN, P10242 Function : Transcriptional activator; DNA-binding protein that specifically recognize the sequence5'-YAAC[GT]G-3'. Plays an important role in the control of proliferation and differentiation ofhematopoietic progenitor cells
Gene Wiki entry for MYB
Genomic Location for MYB
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the MYB gene Entrez Gene cytogenetic band: 6q22-q23 Ensembl cytogenetic band: 6q23.3 HGNC cytogenetic band: 6q22-q23 MYB Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 6 GeneLoc Exon Structure
GeneLoc location for GC06P135544:
(about GC identifiers )
Start:
135,544,146 bp from pter
End:
135,582,003 bp from pter
Size:
37,858 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000006.10 NT_025741.14 Proteins for MYB
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MYB_HUMAN, P10242 (See
protein sequence )Recommended Name: Myb proto-oncogene protein Size : 640 amino acids; 72341 Da
Subunit : Binds MYBBP1A. Interacts with HIPK2, MAF and NLK (By similarity)
Subcellular location : Nucleus
Secondary accessions : P78391 P78392 P78525 P78526 Q14023 Q14024 Q9UE83Alternative splicing : 6 isoforms : P10242-1 P10242-2 P10242-3 P10242-4 P10242-5 P10242-6
Post-translational modifications:
Ubiquitinated; mediated by SIAH1 and leading to its subsequent proteasomal degradation (Probable)1
Phosphorylated by NLK on multiple sites, which induces proteasomal degradation (By similarity)1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001123644.1 NP_001123645.1 NP_005366.2 ENSEMBL proteins: ENSP00000339992 ENSP00000356786 ENSP00000356788 ENSP00000326328 ENSP00000237302 ENSP00000341050 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: MYB 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for MYB: Assays for MYB:
Protein
Domains/ Families for MYB(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P10242 ProtoNet protein and cluster: P10242
2 Blocks protein families : IPB001005 Myb DNA-binding domain IPB012642 Mitotic Wos2 UniProtKB/Swiss-Prot: MYB_HUMAN, P10242 Domain : Comprised of 3 domains; an N-terminal DNA-binding domain, a centrally locatedtranscriptional activation domain and a C-terminal domain involved in transcriptional repression Similarity : Contains 3 HTH myb-type DNA-binding domains
Gene Function for MYB
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_005375 Applied Biosystems Silencer ® siRNAs for MYB Sigma-Aldrich siRNA for MYB Sigma-Aldrich shRNA Panels and shRNA for MYB Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130172                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130172                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001130172  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001130173 UniProtKB/Swiss-Prot: MYB_HUMAN, P10242 Function : Transcriptional activator; DNA-binding protein that specifically recognize the sequence5'-YAAC[GT]G-3'. Plays an important role in the control of proliferation and differentiation ofhematopoietic progenitor cells
Genatlas biochemistry entry for MYB :avian myeloblastosis viral (v-myb) oncogene homolog,involved in hematopoiesis
7 MGI mutant phenotypes (inferred from 9 alleles ) (MGI details for Myb) :3 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for MYB
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for MYB 5/114 Interacting proteins for MYB (ENSP00000339992 3 P10242 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 114
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006355 regulation of transcription, DNA-dependent
NAS 2189102
About this table
Drugs & Compounds for MYB (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for MYB 10/28 Novoseek chemical compound relationships for MYB gene (see all 28
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
dbds
40.84
1
11522824 (1)
oligonucleotide
38.44
14
15563404 (2), 1544939 (1), 1594446 (1), 8058310 (1) (see all 10 )
leucine
32.60
19
8195231 (2), 1306303 (2), 2189102 (1), 15019774 (1) (see all 7 )
phosphorothioate
26.56
1
15001837 (1)
thymidine
20.42
21
1717494 (1), 1944282 (1), 1485708 (1), 1705831 (1) (see all 10 )
nitroblue tetrazolium
19.45
1
1511460 (1)
phorbol
11.28
3
1323820 (1), 7651737 (1)
abscisic acid
10.02
4
12509522 (2)
12-o-tetradecanoylphorbol 13-acetate
6.77
6
12354938 (2), 1450490 (1)
steroid
4.47
2
16263717 (1), 9238849 (1)
About this table
Transcripts for MYB(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_005375 Sigma-Aldrich siRNA for MYB Sigma-Aldrich shRNA Panels and shRNA for MYB Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001130172 NM_001130173 NM_005375
REFSEQ mRNAs for MYB gene (3 alternative transcripts): NM_001130172.1 NM_001130173.1 NM_005375.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001130172 NM_001130173 NM_005375
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130172                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130172                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001130172  
Additional cDNA sequence: AF104863.1 AJ606319.1 AJ606320.1 AJ616235.1 AJ616791.1 AJ616792.1 AJ616795.1 AJ616796.4 AJ616798.1 AJ616800.1 AJ616801.1 AJ616802.1 AJ616803.1 AJ616804.1 AJ616805.1 AY787443.1 AY787444.1 AY787445.1 AY787446.1 AY787447.1 AY787448.1 AY787449.1 AY787451.1 AY787452.1 AY787455.1 AY787456.1 AY787457.1 AY787458.1 AY787460.1 AY787461.1 AY787462.1 AY787463.1 AY787465.1 AY787466.1 AY787467.1 AY787468.1 AY787469.1 AY787470.1 AY787471.1 AY787472.1 AY787473.1 AY787474.1 AY787475.1 BC035996.1 BC064955.1 M13665.1 M13666.1 M15024.1 X17469.1 X52125.1
20 DOTS entries : DT.121338061 DT.102831632 DT.99927129 DT.102831631 DT.102831629 DT.121338068 DT.102831626 DT.121338051 DT.121338057 DT.102831630 DT.121338040 DT.445839 DT.100773244 DT.98131948 DT.121338049 DT.121338062 DT.121338063 DT.121338070 DT.121338076 DT.95160870
24/109 AceView cDNA sequences (see all 109
):BX107408 CB163433 BC064955 BC035996 AJ616800 AJ606322 NM_005375 AA807457 AJ606324 AJ616793 AJ616794 AJ616791 BQ220472 AJ606320 AJ616801 CA310616 BQ212680 BE870267 AJ616797 AJ606321 AJ606319 AJ616802 AJ616798 AJ616792
highest scoring ESTs for MYB :M15024 AA535078 AA622496 AA678524 AA807457 AF104863 AI085897 AI630041 AI708084 AI923729
Unigene Cluster for MYB: V-myb myeloblastosis viral oncogene homolog (avian) Hs.654446 [show with all ESTs ] Unigene Representative Sequence: NM_001130173 GeneLoc Exon Structure 5/13 Alternative Splicing Database (ASD) splice patterns (SP) for MYB (see all 13
) ExUns: 1a · 1b ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b · 9c ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 SP1 :     -   -                   -   -       -   -     -           -     SP2 :     -   -                     -       -   -     -           -     SP3 :     -   -                     -   -       -     -           -     SP4 :     -   -                     -   -     -       -           -     SP5 :     -   -                     -   -     -   -               -    
About this scheme ECgene alternative splicing isoforms for MYB 6 Ensembl transcripts including schematic representations : ENST00000341911
ENST00000367812
ENST00000367814
ENST00000316528
ENST00000237302
ENST00000339290
Expression for MYB
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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MYB expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for MYB 1 / 2 / 3
12 probe-sets matching MYB gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GATCCTGTGTSOURCE GeneReport for Unigene cluster: Hs.654446 Expression variation in blood from EXPOLDB for MYB
Orthologs for MYB
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for MYB gene from 5/9 species (see all 9
)
About this table Species with no ortholog for MYB ENSEMBL Gene Tree for MYB Paralogs for MYB (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for MYB gene MYBL2 2 MYBL1 2
SNPs/Variants for MYB (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for MYB (up to first 250kb)
Disorders & Mutations for MYB
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 189990
10/64 Novoseek disease relationships for MYB gene (see all 64
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
myeloblastosis
73.71
4
12490953 (1), 11080802 (1), 18930885 (1), 8336948 (1)
lymphosarcoma bovine
70.57
2
8116930 (1), 7929419 (1)
myeloid leukemia
69.15
13
12631292 (1), 2088479 (1), 8654374 (1), 11956664 (1) (see all 11 )
leukemogenesis
60.86
9
9271390 (1), 15540222 (1), 12384144 (1), 18505338 (1) (see all 6 )
leukemia
59.72
62
18195038 (3), 1588953 (3), 1560675 (2), 8967957 (2) (see all 32 )
erythroleukemia
54.79
9
8132611 (2), 8496152 (2), 1533276 (1), 1640736 (1) (see all 6 )
blast crisis
46.27
9
16797705 (3), 8967957 (2), 9737692 (1), 18550858 (1)
malignant histiocytosis
42.07
1
8352523 (1)
hematopoietic malignancies
40.89
2
10880029 (1), 9258605 (1)
myeloid leukemia chronic
40.18
9
8967957 (2), 16797705 (2), 10678368 (1), 18550858 (1) (see all 5 )
About this table Genetic Association Database: MYB Human Genome Epidemiology Navigator: MYB (8 documents) Tumor Gene Database : MYB
Medical News for MYB (Possibly Related Articles in
Doctor's Guide )
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--
Publications for MYB (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/480 PubMed articles for MYB gene (see all 480
): Positive autoregulation of c-myb expression via Myb binding sites in the 5' flanking region of the human c-myb gene. (PubMed id 1944282) 1, 3, 4 Nicolaides N.C.... Calabretta B. (1991) The intron 6 G/T polymorphism of c-myb oncogene and the risk for coronary in-stent restenosis. (PubMed id 15221349) 1, 3, 6 Gross C.M....Praus M. (2004) Alternative splicing of the human c-myb gene. (PubMed id 2202948) 1, 3, 4 Westin E.H.... Clarke M.F. (1990) Transcriptional activation by human c-myb and v-myb genes. (PubMed id 2189102) 1, 3, 4 Kalkbrenner F.... Moelling K. (1990) The c-Myb functions as a downstream target of PDGF-mediated survival signal in vascular smooth muscle cells. (PubMed id 17599807) 2, 3 Chen Y....Mo X. (2007) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) p53 suppresses the c-Myb-induced activation of heat shock transcription factor 3. (PubMed id 10747903) 3, 4 Tanikawa J.... Ishii S. (2000) Identification of a second promoter in the human c-myb proto- oncogene. (PubMed id 8302584) 3, 4 Jacobs S.M.... Westin E.H. (1994) Identification of alternatively spliced transcripts for human c-myb: molecular cloning and sequence analysis of human c-myb exon 9A sequences. (PubMed id 2687764) 3, 4 Dasgupta P. and Reddy E.P. (1989) Human c-myb protooncogene: nucleotide sequence of cDNA and organization of the genomic locus. (PubMed id 3540945) 3, 4 Majello B.... Dalla-Favera R. (1986)
Search for MYB
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Genome Databases showing MYB
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing MYB
(According to HUGE )
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Specialized Databases showing MYB (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for MYB (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for MYB:
Search Tocris compounds for MYB
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009