MX1 Gene
protein-coding GIFtS : 65
GC21P041720
myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) (Previous names: myxovirus (influenza) resistance 1, homolog of murine (interferon-inducible protein p78) )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
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Aliases & Descriptions for MX1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase , and/or 9 Nature :405,311-319 and CroW21)About This Section
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Aliases IFI-78K 1 , 2 , 3 IFI78 2 , 5 MX 2 , 5 MxA 1 , 2
Descriptions Interferon-induced protein p78 3 Interferon-regulated resistance GTP-binding protein MxA 3 Myxovirus resistance protein 1 2 , 3 human interferon-regulated resistance GTP-binding protein MXA 9 interferon inducible protein p78 2 interferon-induced GTP-binding protein Mx1 2 interferon-regulated resistance GTP-binding protein 2 myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) 2 myxovirus (influenza) resistance 1, homolog of murine (interferon-inducible protein p78) 1
Search outside databases for aliases for MX1 genePrevious GC identifers: GC21P039372 GC21P041713 GC21P041718
Summaries for MX1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for MX1 : In mouse, the interferon-inducible Mx protein is responsible for a specific antiviral state againstinfluenza virus infection. The protein encoded by this gene is similar to the mouse protein asdetermined by its antigenic relatedness, induction conditions, physicochemical properties, andamino acid analysis. This cytoplasmic protein is a member of both the dynamin family and thefamily of large GTPases. Two transcript variants encoding the same protein have been found forthis gene. [provided by RefSeq] UniProtKB/Swiss-Prot: MX1_HUMAN, P20591 Function : May regulate the calcium channel activity of TRPCs. Shows activity against influenzavirus and VSV, a rhabdovirus
Gene Wiki entry for MX1
Genomic Location for MX1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences , Whole Chromsome Sequence According to
Nature (Cited Here with Permission) :405,311-319 and CroW21)About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 21q22.3 Ensembl cytogenetic band: 21q22.3 HGNC cytogenetic band: 21q22.3 Nature(405: 311-319) cytogenetic band: 21q22.3 MX1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
GC21P041720:
GeneLoc
Nature :405,311-319
Start:
41,714,312 bp from pter
28,371,509 bp from centromere
End:
41,753,011 bp from pter
28,404,533 bp from centromere
Size:
38,700 bases
33,025 bases
Orientation:
plus strand
plus strand
RefSeq DNA sequence: NC_000021.7 NT_011512.10 Proteins for MX1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MX1_HUMAN, P20591 (See
protein sequence )Recommended Name: Interferon-induced GTP-binding protein Mx1 Size : 662 amino acids; 75534 Da
Subunit : Interacts with TRPC1, TRPC3, TRPC4, TRPC5, TRPC6 and TRPC7
Subcellular location : Cytoplasm
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001138397.1 NP_002453.2 ENSEMBL proteins: ENSP00000288383 ENSP00000381599 ENSP00000381601 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: MX1 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for MX1: Assays for MX1:
Protein
Domains/ Families for MX1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P20591 ProtoNet protein and cluster: P20591
1 Blocks protein family : IPB001401 Dynamin UniProtKB/Swiss-Prot: MX1_HUMAN, P20591 Similarity : Belongs to the dynamin familySimilarity : Contains 1 GED domain
Gene Function for MX1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_002462 Applied Biosystems Silencer ® siRNAs for MX1 Sigma-Aldrich siRNA and siRNA Panels for MX1 Sigma-Aldrich shRNA Panels and shRNA for MX1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001144925                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001144925                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001144925  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002462 UniProtKB/Swiss-Prot: MX1_HUMAN, P20591 Function : May regulate the calcium channel activity of TRPCs. Shows activity against influenzavirus and VSV, a rhabdovirus Induction : By interferons
Genatlas biochemistry entry for MX1 :myxovirus (influenza) resistance 1;human murine MX equivalent 4 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for MX1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for MX1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for MX1 5/49 Interacting proteins for MX1 (P20591 1 ENSP00000288383 3 ) via UniProtKB, MINT, and/or STRING (see all 49
)About this table 4 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for MX1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for MX1 10/11 Novoseek chemical compound relationships for MX1 gene (see all 11
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
ifn-alpha
69.82
19
9562412 (4), 12595530 (2), 17505473 (2), 11983232 (2) (see all 8 )
gtp
46.92
38
8411374 (4), 11959118 (3), 7507812 (2), 7539430 (2) (see all 15 )
poly(i-c)
42.20
4
14698216 (2), 10954913 (1), 16751646 (1)
neopterin
25.93
3
12522042 (1), 9858319 (1), 17420930 (1)
gdp
20.32
6
11959118 (2), 7507489 (2)
leucine
17.96
14
1281477 (4), 14698216 (2), 9781814 (1), 10954913 (1) (see all 7 )
guanosine
17.04
2
15602733 (1), 16413306 (1)
rantes
11.75
3
18353943 (1), 16571117 (1), 14610214 (1)
glyceraldehyde 3-phosphate
10.17
2
17335844 (1), 12601105 (1)
atp
5.09
2
7507489 (1)
About this table
Transcripts for MX1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_002462 Sigma-Aldrich siRNA and siRNA Panels for MX1 Sigma-Aldrich shRNA Panels and shRNA for MX1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_002462
REFSEQ mRNAs for MX1 gene (2 alternative transcripts): NM_001144925.1 NM_002462.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002462
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001144925                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001144925                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001144925  
Additional cDNA sequence: AK093008.1 AK096355.1 AK225885.1 AK315465.1 AY186254.1 BC014222.2 BC032602.1 CR592170.1 CR595895.1 M30817.1 M33882.1
22 DOTS entries : DT.97847397 DT.218632 DT.100793266 DT.100793277 DT.92450878 DT.218633 DT.95253378 DT.100793270 DT.95121282 DT.100009551 DT.100644751 DT.95276034 DT.100030600 DT.100793267 DT.121129973 DT.95276031 DT.101977467 DT.121129985 DT.75110933 DT.92450867 DT.95318508 DT.100754756
24/331 AceView cDNA sequences (see all 331
):CD370433 BU736637 N98766 BX482492 BQ447055 CD700744 BM669018 F05704 AL553896 BQ447080 AU121592 CB120263 CR592170 AI968983 AU133022 NM_002462 BQ688620 BQ068247 AI865200 BM704470 AA361869 BQ576219 BM673149 R88402
highest scoring ESTs for MX1 :M33882 AA004402 AA053202 AA112842 AA127870 AA128097 AA143789 AA193601 AA193638 AA232871
Unigene Cluster for MX1: Myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) Hs.517307 [show with all ESTs ] Unigene Representative Sequence: AK096355 GeneLoc Exon Structure 5/13 Alternative Splicing Database (ASD) splice patterns (SP) for MX1 (see all 13
) ExUns: 1 ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c ^ 5a · 5b · 5c ^ 6a · 6b · 6c ^ 7 ^ 8a · 8b ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15a · SP1 :                                             -     -     SP2 :                                                     SP3 :                                             -     -     SP4 :                                                     SP5 :     -                                                
ExUns: 15b ^ 16 ^ 17 ^ 18 SP1 :         SP2 :         SP3 :         SP4 :         SP5 :        
About this scheme ECgene alternative splicing isoforms for MX1 3 Ensembl transcripts including schematic representations : ENST00000288383
ENST00000398598
ENST00000398600
Expression for MX1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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MX1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for MX1 1 / 2 / 3
3 probe-sets matching MX1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: AGTGCCGTGTSOURCE GeneReport for Unigene cluster: Hs.517307 Expression variation in blood from EXPOLDB for MX1
Orthologs for MX1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for MX1 gene from 5/10 species (see all 10
)
About this table Species with no ortholog for MX1 ENSEMBL Gene Tree for MX1 Paralogs for MX1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for MX1 gene MX2 2 OPA1 2
SNPs/Variants for MX1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for MX1 (up to first 250kb)
Disorders & Mutations for MX1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 147150 10/56 Novoseek disease relationships for MX1 gene (see all 56
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
vesicular stomatitis
79.68
19
2161946 (2), 15812245 (1), 7507812 (1), 9060610 (1) (see all 17 )
influenza
72.05
106
18199636 (5), 16704297 (5), 1548781 (5), 1321288 (5) (see all 51 )
rna virus infections
68.84
2
7831843 (1)
virus infection
68.76
72
12858204 (4), 16704297 (4), 11551256 (4), 9562412 (4) (see all 43 )
multiple sclerosis
68.66
19
14607790 (3), 16843495 (2), 11536237 (2), 14529316 (1) (see all 15 )
rift valley fever
59.38
1
17970694 (1)
multiple sclerosis relapsing-remitting
56.12
1
11516761 (1)
hepatitis c chronic
55.05
5
12210408 (1), 15117331 (1), 15684819 (1), 16894313 (1)
lupus erythematosus
54.21
2
10070906 (1), 7822763 (1)
hepatitis c
47.89
13
10213463 (2), 11805446 (2), 10971132 (2), 15117331 (1) (see all 10 )
About this table 1 PharmGKB disease relationship for MX1 gene About this table Human Gene Mutation Database : MX1 Genetic Association Database: MX1 Human Genome Epidemiology Navigator: MX1 (15 documents)
Medical News for MX1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for MX1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/317 PubMed articles for MX1 gene (see all 317
): Dominant-negative mutants of human MxA protein: domains in the carboxy-terminal moiety are important for oligomerization and antiviral activity. (PubMed id 9060610) 1, 3, 4 Ponten A....Kochs G. (1997) Single nucleotide polymorphism of the MxA gene promoter influences the response to interferon monotherapy in patients with hepatitis C viral infection. (PubMed id 15117331) 1, 3, 6 Suzuki F....Kumada H. (2004) Interferon-induced Mx proteins in antiviral host defense. (PubMed id 17570575) 1, 2, 3 Haller O....Kochs G. (2007) Functional MxA promoter polymorphism associated with subacute sclerosing panencephalitis. (PubMed id 14872030) 1, 3, 6 Torisu H....Hara T. (2004) Polymorphisms in interferon-induced genes and the outcome of hepatitis C virus infection: roles of MxA, OAS-1 and PKR. (PubMed id 12944978) 1, 3, 6 Knapp S....Thursz M.R. (2003) Resistance to influenza virus and vesicular stomatitis virus conferred by expression of human MxA protein. (PubMed id 2161946) 1, 3, 4 Pavlovic J.... Staeheli P. (1990) Polymorphisms of interferon-inducible genes OAS-1 and MxA associated with SARS in the Vietnamese population. (PubMed id 15766558) 1, 3, 6 Hamano E....Keicho N. (2005) Genetic polymorphisms in interferon pathway and response to interferon treatment in hepatitis B patients: A pilot study. (PubMed id 12447867) 1, 3, 6 King J.K....Chen P.J. (2002) Cloning and sequence analyses of cDNAs for interferon- and virus- induced human Mx proteins reveal that they contain putative guanine nucleotide-binding sites: functional study of the corresponding gene promoter. (PubMed id 2154602) 1, 3, 4 Horisberger M.A....Content J. (1990) [A case-control study on the mxA polymorphisms and susceptibility to severe acute respiratory syndromes] (PubMed id 16390004) 3, 6 Wang H.W....Cao W.C. (2005)
Search for MX1
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Genome Databases showing MX1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing MX1
(According to HUGE )
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Specialized Databases showing MX1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for MX1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for MX1:
Recombinant Proteins (MX1 ) Antibodies (MX1 )
Search Tocris compounds for MX1
Antibodies for MX1
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009