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Aliases for MTOR-AS1 Gene

Subcategory (RNA class) for MTOR-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MTOR-AS1 Gene

  • MTOR Antisense RNA 1 2 3 5
  • MTOR Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MTOR-AS1 Gene

Previous GeneCards Identifiers for MTOR-AS1 Gene

  • GC00U933341
  • GC01P011204

Summaries for MTOR-AS1 Gene

GeneCards Summary for MTOR-AS1 Gene

MTOR-AS1 (MTOR Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTOR-AS1 Gene

Genomics for MTOR-AS1 Gene

Regulatory Elements for MTOR-AS1 Gene

Enhancers for MTOR-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F011280 1.1 Ensembl ENCODE 9.7 +137.8 137766 3.3 HDGF PKNOX1 FEZF1 ZNF23 ZNF316 POLR2A NCOR1 PRDM10 MAFK EGR2 MTOR-AS1 EXOSC10 MASP2 UBE2V2P3 PIR33705
GH01F010758 1 Ensembl ENCODE 8.8 -383.0 -383045 4.5 SCRT1 ZNF687 RFX1 SP5 ZMYM3 PPARG ZKSCAN1 ZNF664 HIC1 ZFHX2 MTOR-AS1 MTOR CASZ1 GC01P010673
GH01F011062 0.8 ENCODE 10.7 -80.8 -80760 1.2 PKNOX1 MXI1 USF1 TBL1XR1 MAX BMI1 RELA ZNF121 POLR2A EED TARDBP MTOR-AS1 MTOR GC01P011060 ENSG00000226849
GH01F010765 0.7 ENCODE 8.8 -378.1 -378050 1.7 BCOR ESRRA ZMYM3 ZIC2 GLIS2 ZFHX2 ADNP FOS ZSCAN29 EGR2 MTOR-AS1 MTOR CASZ1 GC01P010673
GH01F011064 0.5 ENCODE 10.7 -79.8 -79830 0.1 CTCF ZBTB33 ZNF600 RAD21 TARDBP MTOR-AS1 MTOR ENSG00000226849 GC01P011060
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MTOR-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MTOR-AS1 Gene

Chromosome:
1
Start:
11,143,898 bp from pter
End:
11,149,538 bp from pter
Size:
5,641 bases
Orientation:
Plus strand

Genomic View for MTOR-AS1 Gene

Genes around MTOR-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTOR-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTOR-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTOR-AS1 Gene

Proteins for MTOR-AS1 Gene

Post-translational modifications for MTOR-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTOR-AS1 Gene

Domains & Families for MTOR-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTOR-AS1 Gene

Function for MTOR-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTOR-AS1 Gene

Localization for MTOR-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MTOR-AS1 Gene

Pathways & Interactions for MTOR-AS1 Gene

SuperPathways for MTOR-AS1 Gene

No Data Available

Interacting Proteins for MTOR-AS1 Gene

Gene Ontology (GO) - Biological Process for MTOR-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTOR-AS1 Gene

Transcripts for MTOR-AS1 Gene

mRNA/cDNA for MTOR-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MTOR-AS1 Gene

MTOR antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MTOR-AS1 Gene

No ASD Table

Relevant External Links for MTOR-AS1 Gene

GeneLoc Exon Structure for
MTOR-AS1
ECgene alternative splicing isoforms for
MTOR-AS1

Expression for MTOR-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MTOR-AS1 Gene

SOURCE GeneReport for Unigene cluster for MTOR-AS1 Gene:

Hs.679133
genes like me logo Genes that share expression patterns with MTOR-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MTOR-AS1 Gene

Orthologs for MTOR-AS1 Gene

Evolution for MTOR-AS1 Gene

ENSEMBL:
Gene Tree for MTOR-AS1 (if available)
TreeFam:
Gene Tree for MTOR-AS1 (if available)

No data available for Orthologs for MTOR-AS1 Gene

Paralogs for MTOR-AS1 Gene

No data available for Paralogs for MTOR-AS1 Gene

Variants for MTOR-AS1 Gene

Sequence variations from dbSNP and Humsavar for MTOR-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs869312671 Pathogenic 11,144,735(-) CACAT(A/G)CTGTC nc-transcript-variant, downstream-variant-500B, reference, missense
rs1057079 -- 11,145,001(-) ACTGC(A/G)ATGGC intron-variant, nc-transcript-variant, reference, synonymous-codon
rs111307099 -- 11,148,913(+) AATTA(-/TG)TGTGT intron-variant
rs113224204 -- 11,144,139(+) AGGCA(A/T)CCCCA intron-variant
rs114724544 -- 11,146,422(+) ATGAC(C/G)CAACA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MTOR-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1122297 CNV deletion 24896259
nsv545407 CNV gain 21841781

Relevant External Links for MTOR-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTOR-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MTOR-AS1 Gene

Disorders for MTOR-AS1 Gene

Relevant External Links for MTOR-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MTOR-AS1

No disorders were found for MTOR-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MTOR-AS1 Gene

Publications for MTOR-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3 64

Products for MTOR-AS1 Gene

Sources for MTOR-AS1 Gene

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