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Aliases for MTOR-AS1 Gene

Subcategory (RNA class) for MTOR-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MTOR-AS1 Gene

  • MTOR Antisense RNA 1 2 3 5
  • MTOR Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MTOR-AS1 Gene

Previous GeneCards Identifiers for MTOR-AS1 Gene

  • GC00U933341
  • GC01P011204

Summaries for MTOR-AS1 Gene

GeneCards Summary for MTOR-AS1 Gene

MTOR-AS1 (MTOR Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTOR-AS1 Gene

Genomics for MTOR-AS1 Gene

Regulatory Elements for MTOR-AS1 Gene

Enhancers for MTOR-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G011280 1.1 Ensembl ENCODE 9.7 +137.8 137807 3.2 HDGF PKNOX1 FEZF1 ZNF23 ETV6 EGR2 ZEB2 TSHZ1 ZNF623 NR2F2 MTOR-AS1 EXOSC10 MASP2 UBE2V2P3 PIR33705
GH01G010759 1.2 Ensembl ENCODE dbSUPER 8.8 -383.0 -383045 4.5 ZMYM3 ZNF384 RAD21 ZKSCAN1 ZNF664 HIC1 ZFHX2 GLIS2 SCRT2 HNF4G MTOR-AS1 MTOR CASZ1 GC01P010673
GH01G011062 0.9 ENCODE 10.7 -80.8 -80760 1.2 PKNOX1 TBL1XR1 BMI1 ZNF121 RELB IKZF2 CREM ZNF263 CBFB JUNB TARDBP MTOR-AS1 MTOR GC01P011060 ENSG00000226849
GH01G010765 1 ENCODE dbSUPER 8.8 -378.1 -378050 1.7 BCOR ESRRA ZSCAN4 ZMYM3 ZIC2 ZFHX2 GLIS2 ADNP ZSCAN5C ZSCAN29 MTOR-AS1 MTOR CASZ1 GC01P010673
GH01G011245 0.5 ENCODE 10.8 +102.3 102294 2.0 ZNF121 MNT ZNF507 MTOR SRM MTOR-AS1 RNU6-537P C1orf127 ENSG00000226849 RPL39P6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MTOR-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MTOR-AS1 Gene

Chromosome:
1
Start:
11,143,898 bp from pter
End:
11,149,538 bp from pter
Size:
5,641 bases
Orientation:
Plus strand

Genomic View for MTOR-AS1 Gene

Genes around MTOR-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTOR-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTOR-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTOR-AS1 Gene

Proteins for MTOR-AS1 Gene

Post-translational modifications for MTOR-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTOR-AS1 Gene

Domains & Families for MTOR-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTOR-AS1 Gene

Function for MTOR-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTOR-AS1 Gene

Localization for MTOR-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MTOR-AS1 Gene

Pathways & Interactions for MTOR-AS1 Gene

SuperPathways for MTOR-AS1 Gene

No Data Available

Interacting Proteins for MTOR-AS1 Gene

Gene Ontology (GO) - Biological Process for MTOR-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTOR-AS1 Gene

Transcripts for MTOR-AS1 Gene

mRNA/cDNA for MTOR-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MTOR-AS1 Gene

MTOR antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MTOR-AS1 Gene

No ASD Table

Relevant External Links for MTOR-AS1 Gene

GeneLoc Exon Structure for
MTOR-AS1
ECgene alternative splicing isoforms for
MTOR-AS1

Expression for MTOR-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MTOR-AS1 Gene

SOURCE GeneReport for Unigene cluster for MTOR-AS1 Gene:

Hs.679133
genes like me logo Genes that share expression patterns with MTOR-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTOR-AS1 Gene

Orthologs for MTOR-AS1 Gene

Evolution for MTOR-AS1 Gene

ENSEMBL:
Gene Tree for MTOR-AS1 (if available)
TreeFam:
Gene Tree for MTOR-AS1 (if available)

No data available for Orthologs for MTOR-AS1 Gene

Paralogs for MTOR-AS1 Gene

No data available for Paralogs for MTOR-AS1 Gene

Variants for MTOR-AS1 Gene

Sequence variations from dbSNP and Humsavar for MTOR-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs869312671 Pathogenic 11,144,735(-) CACAT(A/G)CTGTC nc-transcript-variant, downstream-variant-500B, reference, missense
rs886041096 Uncertain significance 11,146,756(-) GTATG(A/G)TCCCT intron-variant, nc-transcript-variant, reference, missense
rs1000991364 -- 11,144,866(+) GAAAA(C/T)AGGCA intron-variant, nc-transcript-variant
rs1001062962 -- 11,142,665(+) CTACT(A/G)CTTCA intron-variant, upstream-variant-2KB
rs1001361977 -- 11,147,060(+) CATGA(G/T)TGTGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MTOR-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1122297 CNV deletion 24896259
nsv545407 CNV gain 21841781

Relevant External Links for MTOR-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTOR-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MTOR-AS1 Gene

Disorders for MTOR-AS1 Gene

Relevant External Links for MTOR-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MTOR-AS1

No disorders were found for MTOR-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MTOR-AS1 Gene

Publications for MTOR-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3 64

Products for MTOR-AS1 Gene

Sources for MTOR-AS1 Gene

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