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Aliases for MTND5P1 Gene

Subcategory (RNA class) for MTND5P1 Gene

lncRNA

Aliases for MTND5P1 Gene

  • Mitochondrially Encoded NADH:Ubiquinone Oxidoreductase Core Subunit 5 Pseudogene 1 2 3 5
  • MT-ND5 Pseudogene 1 2
  • MTND5 Pseudogene 1 2

External Ids for MTND5P1 Gene

ORGUL Members for MTND5P1 Gene

Previous GeneCards Identifiers for MTND5P1 Gene

  • GC00U932746
  • GC21M045895

Summaries for MTND5P1 Gene

GeneCards Summary for MTND5P1 Gene

MTND5P1 (Mitochondrially Encoded NADH:Ubiquinone Oxidoreductase Core Subunit 5 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTND5P1 Gene

Genomics for MTND5P1 Gene

Regulatory Elements for MTND5P1 Gene

Enhancers for MTND5P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21G044169 2.1 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +301.3 301344 7.7 MLX CREB3L1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF548 MCM3 SP3 PWP2 ENSG00000184441 MTND5P1 PFKL ICOSLG TRPM2 TRAPPC10 PDXK ENSG00000237604 GC21M044167
GH21G044137 2 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +332.6 332573 11.0 HNRNPUL1 HDGF PKNOX1 AGO1 WRNIP1 ARID4B SIN3A ZNF2 YY1 ZNF207 PWP2 ICOSLG TRAPPC10 MTND5P1 PFKL C21orf2 TRPM2 PDXK AGPAT3 PIR47010
GH21G043596 2 FANTOM5 Ensembl ENCODE dbSUPER 9.7 +874.3 874337 9.4 HDGF FOXA2 ARNT MLX ARID4B DMAP1 YBX1 ZNF2 ZNF302 FOS WDR4 U2AF1 ENSG00000233754 ENSG00000184441 PDXK HSF2BP FRGCA MTND5P1 TRAPPC10 CSTB
GH21G043724 2 FANTOM5 Ensembl ENCODE dbSUPER 9.7 +742.2 742198 17.4 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF263 U2AF1 PWP2 ENSG00000233754 HSF2BP WDR4 PDXK RRP1B MTND5P1 TRPM2 CSTB
GH21G043492 2 FANTOM5 Ensembl ENCODE dbSUPER 9.7 +976.3 976271 12.4 HDGF PKNOX1 FOXA2 MLX SIN3A ARID4B DMAP1 YBX1 ZNF2 ZBTB7B ENSG00000184441 HSF2BP PDXK WDR4 U2AF1 PWP2 MTND5P1 SIK1 PIR54224 RPL31P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MTND5P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MTND5P1 Gene

Chromosome:
21
Start:
44,473,723 bp from pter
End:
44,475,097 bp from pter
Size:
1,375 bases
Orientation:
Minus strand

Genomic View for MTND5P1 Gene

Genes around MTND5P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTND5P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTND5P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTND5P1 Gene

Proteins for MTND5P1 Gene

Post-translational modifications for MTND5P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTND5P1 Gene

Domains & Families for MTND5P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTND5P1 Gene

Function for MTND5P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTND5P1 Gene

Localization for MTND5P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MTND5P1 Gene

Pathways & Interactions for MTND5P1 Gene

SuperPathways for MTND5P1 Gene

No Data Available

Interacting Proteins for MTND5P1 Gene

Gene Ontology (GO) - Biological Process for MTND5P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTND5P1 Gene

Transcripts for MTND5P1 Gene

mRNA/cDNA for MTND5P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MTND5P1 Gene

No ASD Table

Relevant External Links for MTND5P1 Gene

GeneLoc Exon Structure for
MTND5P1
ECgene alternative splicing isoforms for
MTND5P1

Expression for MTND5P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MTND5P1 Gene

mRNA expression in normal human tissues for MTND5P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTND5P1 Gene:

MTND5P1
genes like me logo Genes that share expression patterns with MTND5P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTND5P1 Gene

Orthologs for MTND5P1 Gene

Evolution for MTND5P1 Gene

ENSEMBL:
Gene Tree for MTND5P1 (if available)
TreeFam:
Gene Tree for MTND5P1 (if available)

No data available for Orthologs for MTND5P1 Gene

Paralogs for MTND5P1 Gene

No data available for Paralogs for MTND5P1 Gene

Variants for MTND5P1 Gene

Relevant External Links for MTND5P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTND5P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTND5P1 Gene

Disorders for MTND5P1 Gene

No disorders were found for MTND5P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTND5P1 Gene

Publications for MTND5P1 Gene

No publications were found for MTND5P1 Gene.

Products for MTND5P1 Gene

Sources for MTND5P1 Gene

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