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Aliases for MTMR10 Gene

Aliases for MTMR10 Gene

  • Myotubularin Related Protein 10 2 3 5

External Ids for MTMR10 Gene

Previous GeneCards Identifiers for MTMR10 Gene

  • GC15M029019
  • GC15M031231
  • GC15M008408

Summaries for MTMR10 Gene

GeneCards Summary for MTMR10 Gene

MTMR10 (Myotubularin Related Protein 10) is a Protein Coding gene. Diseases associated with MTMR10 include Chromosome 15Q13.3 Microdeletion Syndrome and Congenital Stationary Night Blindness. GO annotations related to this gene include phosphatase activity. An important paralog of this gene is MTMR12.

UniProtKB/Swiss-Prot for MTMR10 Gene

  • Probable pseudophosphatase. Contains a Glu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase (Potential).

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTMR10 Gene

Genomics for MTMR10 Gene

Regulatory Elements for MTMR10 Gene

Enhancers for MTMR10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G030962 1.1 ENCODE dbSUPER 25.4 +29.1 29053 1.2 FEZF1 ZNF2 ZNF366 SCRT2 ZEB2 TSHZ1 ZNF843 PRDM6 ZNF610 SMARCA4 MTMR10 FAN1 TRPM1 GC15M030957
GH15G030941 1 dbSUPER 24.3 +48.6 48565 3.2 HDGF ZNF48 GLIS2 ZNF207 FOS TBX21 KAT8 SMARCA4 GLIS1 RCOR2 MTMR10 FAN1 ARHGAP11B ENSG00000260382 RNU6-466P ENSG00000270015
GH15G030988 1.6 Ensembl ENCODE dbSUPER 13.9 +1.0 1003 4.8 PKNOX1 FOXA2 WRNIP1 ARID4B SIN3A YY1 ZNF143 ZNF207 SP5 ZNF592 MTMR10 HERC2P10 TRPM1 RNU6-466P FAN1 ENSG00000260382 ENSG00000215302 GC15M030957
GH15G030920 1.8 FANTOM5 Ensembl ENCODE dbSUPER 12.3 +68.7 68744 3.9 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 ZNF263 FAN1 MTMR10 RNU6-466P ENSG00000260382 ENSG00000215302 PIR52520 PIR44387
GH15G031261 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.2 -273.9 -273910 9.0 HDGF PKNOX1 ARNT WRNIP1 ARID4B YY1 ZNF143 ZNF207 FOS SP5 KLF13 ENSG00000270055 ENSG00000269930 MTMR10 CHRFAM7A LOC283710
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MTMR10 on UCSC Golden Path with GeneCards custom track

Promoters for MTMR10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000074435 207 2401 PKNOX1 MLX WRNIP1 SIN3A ZNF48 YY1 TCF12 GLIS2 ELK1 ZNF143

Genomic Location for MTMR10 Gene

30,919,764 bp from pter
30,991,607 bp from pter
71,844 bases
Minus strand

Genomic View for MTMR10 Gene

Genes around MTMR10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTMR10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTMR10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTMR10 Gene

Proteins for MTMR10 Gene

  • Protein details for MTMR10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Myotubularin-related protein 10
    Protein Accession:
    Secondary Accessions:
    • Q6P4Q6

    Protein attributes for MTMR10 Gene

    777 amino acids
    Molecular mass:
    88273 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for MTMR10 Gene


neXtProt entry for MTMR10 Gene

Post-translational modifications for MTMR10 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for MTMR10 Gene

Domains & Families for MTMR10 Gene

Gene Families for MTMR10 Gene

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily.
  • Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily.
genes like me logo Genes that share domains with MTMR10: view

Function for MTMR10 Gene

Molecular function for MTMR10 Gene

UniProtKB/Swiss-Prot Function:
Probable pseudophosphatase. Contains a Glu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase (Potential).
genes like me logo Genes that share phenotypes with MTMR10: view

Animal Model Products

CRISPR Products

miRNA for MTMR10 Gene

miRTarBase miRNAs that target MTMR10

Inhibitory RNA Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MTMR10 Gene

Localization for MTMR10 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MTMR10 gene
Compartment Confidence
nucleus 4
cytosol 3
mitochondrion 1

Gene Ontology (GO) - Cellular Components for MTMR10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005829 cytosol TAS --
genes like me logo Genes that share ontologies with MTMR10: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for MTMR10 Gene

Pathways & Interactions for MTMR10 Gene

SuperPathways for MTMR10 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MTMR10 Gene


No data available for Pathways by source and SIGNOR curated interactions for MTMR10 Gene

Drugs & Compounds for MTMR10 Gene

No Compound Related Data Available

Transcripts for MTMR10 Gene

Unigene Clusters for MTMR10 Gene

Myotubularin related protein 10:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for MTMR10 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16a · 16b ^ 17
SP1: - - -
SP3: -
SP8: - -
SP9: - -

Relevant External Links for MTMR10 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MTMR10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MTMR10 Gene

mRNA differential expression in normal tissues according to GTEx for MTMR10 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x5.3).

Protein differential expression in normal tissues from HIPED for MTMR10 Gene

This gene is overexpressed in Brain (31.0), Placenta (12.5), Spinal cord (8.2), and Breast (7.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for MTMR10 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTMR10 Gene:


SOURCE GeneReport for Unigene cluster for MTMR10 Gene:


Evidence on tissue expression from TISSUES for MTMR10 Gene

  • Nervous system(2.8)
genes like me logo Genes that share expression patterns with MTMR10: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTMR10 Gene

Orthologs for MTMR10 Gene

This gene was present in the common ancestor of animals.

Orthologs for MTMR10 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia MTMR10 34 35
  • 99.57 (n)
(Ornithorhynchus anatinus)
Mammalia MTMR10 35
  • 89 (a)
(Canis familiaris)
Mammalia MTMR10 35 34
  • 88.79 (n)
(Rattus norvegicus)
Mammalia Mtmr10 34
  • 87.98 (n)
(Mus musculus)
Mammalia Mtmr10 16 35 34
  • 87.94 (n)
(Monodelphis domestica)
Mammalia MTMR10 35
  • 86 (a)
(Bos Taurus)
Mammalia MTMR10 34 35
  • 83.51 (n)
(Gallus gallus)
Aves MTMR10 35 34
  • 78.16 (n)
(Anolis carolinensis)
Reptilia MTMR10 35
  • 83 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia mtmr10 34
  • 71.52 (n)
(Danio rerio)
Actinopterygii mtmr10 34 35
  • 63.81 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010275 34
  • 46.09 (n)
fruit fly
(Drosophila melanogaster)
Insecta CG14411 34 35
  • 43.37 (n)
Species where no ortholog for MTMR10 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MTMR10 Gene

Gene Tree for MTMR10 (if available)
Gene Tree for MTMR10 (if available)

Paralogs for MTMR10 Gene

Paralogs for MTMR10 Gene

(4) SIMAP similar genes for MTMR10 Gene using alignment to 8 proteins:

genes like me logo Genes that share paralogs with MTMR10: view

Variants for MTMR10 Gene

Sequence variations from dbSNP and Humsavar for MTMR10 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs387907279 Pathogenic 30,925,199(+) ATCAG(C/G/T)GAGCC intron-variant, nc-transcript-variant, reference, missense, stop-gained
rs387907280 Pathogenic 30,930,564(+) TGGGG(A/C/G/T)GCCCT intron-variant, nc-transcript-variant, reference, missense
rs2955795 Benign 30,937,217(+) TGCCA(C/T)GTGGT intron-variant, nc-transcript-variant, reference, synonymous-codon
rs1000095669 -- 30,982,694(+) ATAAT(-/TAAG)TGTCG intron-variant
rs1000097187 -- 30,942,193(+) GAACA(C/T)TTTCC intron-variant, nc-transcript-variant, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for MTMR10 Gene

Variant ID Type Subtype PubMed ID
esv2670722 CNV deletion 23128226
esv3307615 CNV mobile element insertion 20981092
esv3309096 CNV mobile element insertion 20981092
esv3329471 CNV insertion 20981092
esv33507 CNV loss 17666407
esv3353214 CNV insertion 20981092
esv3569376 CNV gain 25503493
esv3636036 CNV gain 21293372
esv3636041 CNV loss 21293372
nsv1046874 CNV gain 25217958
nsv521842 CNV gain 19592680
nsv525795 CNV gain 19592680
nsv832951 CNV loss 17160897
nsv832952 CNV gain+loss 17160897

Variation tolerance for MTMR10 Gene

Residual Variation Intolerance Score: 83.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.33; 70.69% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MTMR10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MTMR10 Gene

Disorders for MTMR10 Gene

MalaCards: The human disease database

(2) MalaCards diseases for MTMR10 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
chromosome 15q13.3 microdeletion syndrome
  • chromosome 15q13.3 deletion syndrome
congenital stationary night blindness
  • congenital essential nyctalopia
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for MTMR10

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with MTMR10: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MTMR10 Gene

Publications for MTMR10 Gene

  1. PTEN and myotubularin phosphatases: from 3-phosphoinositide dephosphorylation to disease. (PMID: 12495846) Wishart M.J. … Dixon J.E. (Trends Cell Biol. 2002) 2 3 64
  2. A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein M.Y. … Mann M. (Cell 2015) 3 64
  3. Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism. (PMID: 24722188) Corominas R. … Iakoucheva L.M. (Nat. Commun. 2014) 3 64
  4. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. (PMID: 24275569) Bian Y. … Zou H. (J. Proteomics 2014) 4 64
  5. Genomic study in Mexicans identifies a new locus for triglycerides and refines European lipid loci. (PMID: 23505323) Weissglas-Volkov D. … Pajukanta P. (J. Med. Genet. 2013) 3 64

Products for MTMR10 Gene

Sources for MTMR10 Gene

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