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GCID:
GC03M095654
GIFtS:
10

MTHFD2P1 Gene(Pseudogene)

Methylenetetrahydrofolate Dehydrogenase (NADP+ Dependent) 2, Methenyltetrahydrofolate Cyclohydrolase Pseudogene 1

Aliases for MTHFD2P1 Gene

Aliases for MTHFD2P1 Gene

  • Methylenetetrahydrofolate Dehydrogenase (NADP+ Dependent) 2, Methenyltetrahydrofolate Cyclohydrolase Pseudogene 1 2 3 5

External Ids for MTHFD2P1 Gene

Previous GeneCards Identifiers for MTHFD2P1 Gene

  • GC03M095372

Summaries for MTHFD2P1 Gene

GeneCards Summary for MTHFD2P1 Gene

MTHFD2P1 (Methylenetetrahydrofolate Dehydrogenase (NADP+ Dependent) 2, Methenyltetrahydrofolate Cyclohydrolase Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTHFD2P1 Gene

Genomics for MTHFD2P1 Gene

Genomic Location for MTHFD2P1 Gene

Chromosome:
3
Start:
95,654,423 bp from pter
End:
95,683,193 bp from pter
Size:
28,771 bases
Orientation:
Minus strand

Genomic View for MTHFD2P1 Gene

Genes around MTHFD2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTHFD2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTHFD2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTHFD2P1 Gene

No data available for Regulatory Elements for MTHFD2P1 Gene

Proteins for MTHFD2P1 Gene

Post-translational modifications for MTHFD2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTHFD2P1 Gene

Domains & Families for MTHFD2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTHFD2P1 Gene

Function for MTHFD2P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTHFD2P1 Gene

Localization for MTHFD2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MTHFD2P1 Gene

Pathways & Interactions for MTHFD2P1 Gene

SuperPathways for MTHFD2P1 Gene

No Data Available

Interacting Proteins for MTHFD2P1 Gene

Gene Ontology (GO) - Biological Process for MTHFD2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTHFD2P1 Gene

Drugs & Compounds for MTHFD2P1 Gene

No Compound Related Data Available

Transcripts for MTHFD2P1 Gene

mRNA/cDNA for MTHFD2P1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MTHFD2P1 Gene

No ASD Table

Relevant External Links for MTHFD2P1 Gene

GeneLoc Exon Structure for
MTHFD2P1
ECgene alternative splicing isoforms for
MTHFD2P1

Expression for MTHFD2P1 Gene

mRNA expression in normal human tissues for MTHFD2P1 Gene

mRNA differential expression in normal tissues according to GTEx for MTHFD2P1 Gene

This gene is overexpressed in Spleen (x14.4), Heart - Atrial Appendage (x7.0), and Pituitary (x4.7).
genes like me logo Genes that share expression patterns with MTHFD2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MTHFD2P1 Gene

Orthologs for MTHFD2P1 Gene

Evolution for MTHFD2P1 Gene

ENSEMBL:
Gene Tree for MTHFD2P1 (if available)
TreeFam:
Gene Tree for MTHFD2P1 (if available)

No data available for Orthologs for MTHFD2P1 Gene

Paralogs for MTHFD2P1 Gene

No data available for Paralogs for MTHFD2P1 Gene

Variants for MTHFD2P1 Gene

Sequence variations from dbSNP and Humsavar for MTHFD2P1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs938092 -- 95,680,975(-) AATTA(A/G)TTCCC intron-variant
rs938093 -- 95,680,852(-) AGTTA(G/T)AGACA intron-variant
rs1397979 -- 95,682,952(-) ACCTC(A/G)TCTGA nc-transcript-variant
rs4438672 -- 95,680,707(-) TCCAT(C/G/T)TGAGC intron-variant
rs4830211 -- 95,660,816(+) tctag(A/C/G)tgtct intron-variant

Relevant External Links for MTHFD2P1 Gene

HapMap Linkage Disequilibrium report
MTHFD2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTHFD2P1 Gene

Disorders for MTHFD2P1 Gene

Relevant External Links for MTHFD2P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MTHFD2P1

No disorders were found for MTHFD2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MTHFD2P1 Gene

Publications for MTHFD2P1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for MTHFD2P1 Gene

Sources for MTHFD2P1 Gene

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