MT1X Gene
protein-coding GIFtS : 52
GCID: GC16 P056719
metallothionein 1X (Previous symbol: MT1 )
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Aliasesfor MT1X gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Metallothionein 1X 1 2 MT-IX2 3 MT-1l1 2 Metallothionein-1X1 MT11 2 Metallothionein-IX3 MT-1X2 3 Metallothionein-IX3
Export aliases for MT1X gene to outside databases Previous GC identifers: GC16U990045 GC16P056428 GC16P056486 GC16P056487 GC16P055267 GC16P055273 GC16P056711 GC16P042585
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Summariesfor MT1X gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: MT1X_HUMAN, P80297 Function : Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins aretranscriptionally regulated by both heavy metals and glucocorticoids Gene Wiki entry for MT1X
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Genomic Viewsfor MT1X gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000016.9 NC_018927.1 NT_010498.15 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MT1X gene promoter: STAT5B STAT1 Sp1 STAT4 STAT1beta STAT1alpha STAT2 STAT3 Zic3 RSRFC4 Other transcription factors Search SABiosciences Chromatin IP Primers for MT1X Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MT1X
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 16q13 Ensembl cytogenetic band: 16q13 HGNC cytogenetic band: 16q13 MT1X Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 16 GeneLoc Exon Structure
GeneLoc location for GC16P056719: view genomic region
(about GC identifiers )
Start:
56,716,336 bp from pter
End:
56,718,108 bp from pter
Size:
1,773 bases
Orientation:
plus strand
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Proteinsfor MT1X gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: MT1X_HUMAN, P80297 (See
protein sequence )Recommended Name: Metallothionein-1X Size : 61 amino acids; 6068 Da
Subunit : Monomer
Secondary accessions : A8MUC7Explore the universe of human proteins at neXtProt for MT1X: NX_P80297 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P80297 MT1X Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_005943.1 ENSEMBL proteins: ENSP00000377995 ENSP00000457024 Human Recombinant Protein Products: Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view) : About this table
MT1X for ontologies About GeneDecksing MT1X Antibody Products: Assay Products for MT1X:
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Protein
Domains / Familiesfor MT1X gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MT1X for domains About GeneDecksing 5 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P80297 ProtoNet protein and cluster: P80297
1 Blocks protein family : IPB002400 Growth factor cystine knot superfamily signature UniProtKB/Swiss-Prot: MT1X_HUMAN, P80297 Domain : Class I metallothioneins contain 2 metal-binding domains: four divalent ions are chelated within cluster A ofthe alpha domain and are coordinated via cysteinyl thiolate bridges to 11 cysteine ligands. Cluster B, the corresponding region within the beta domain, can ligate three divalent ions to 9 cysteines Similarity : Belongs to the metallothionein superfamily. Type 1 family
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Functionfor MT1X gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: MT1X_HUMAN, P80297 Function : Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins aretranscriptionally regulated by both heavy metals and glucocorticoids
Genatlas biochemistry entry for MT1X : metallothionein 1X cluster Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MT1X OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MT1X (see all 3 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MT1X (NM_005952 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MT1X Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MT1X
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
MT1X for ontologies About GeneDecksing
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Pathways & Interactionsfor MT1X gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Mineral absorption 2 Oxidative Stress
Pathway sources See GeneCards unified pathways Show all pathways 1 BioSystems Pathway for MT1X 1
Kegg Pathway (Kegg details for MT1X) :
MT1X for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MT1X STRING Interaction
Network Preview (showing 4 interactants - click image to see more details)4 Interacting proteins for MT1X (ENSP00000377995 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table Gene Ontology (GO): 5 biological process terms (GO ID links to tree view) : About this table
MT1X for ontologies About GeneDecksing
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Drugs & Compoundsfor MT1X gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
MT1X for compounds About GeneDecksing Browse Tocris compounds for MT1X 1 HMDB Compound for MT1X About this table 5 Novoseek chemical compound relationships for MT1X gene About this table
Search CenterWatch for drugs/clinical trials and news about MT1X
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Transcriptsfor MT1X gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MT1X gene: NM_005952.3 Unigene Cluster for MT1X:
Metallothionein 1X Hs.374950 [show with all ESTs ] Unigene Representative Sequence: BC053882 4 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000394485 (uc002ejy.3 ) ENST00000562939 ENST00000568370 ENST00000564974 (uc002ejz.3 )Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MT1X OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MT1X (see all 3 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MT1X (NM_005952 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MT1X Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MT1X
Additional cDNA sequence: AK311284.1 BC018190.1 BC032131.2 BC032338.1 BC053882.1 X76717.1
20 DOTS entries : DT.95091421 DT.100042494
DT.120684898 DT.85103340 DT.120684893 DT.120684786 DT.120684973 DT.99977794 DT.120684791 DT.120684884 DT.85101063 DT.100881113 DT.120684781 DT.95190528 DT.95190553 DT.100893285 DT.120684906 DT.120684982 DT.218152 DT.92387499 24/139 AceView cDNA sequences (see all 139 ):
CD675632 AJ712480 F30476 BX113499 F27787 BI821822 T29525 S68956 F30567 CB529368 CD672936 F26333 AI341945 F25557 T27991 AI358260 BM923250 BM971621 BG926575 AA323862 BX495641 CB117071 AW192642 BM920880 GeneLoc Exon Structure
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Expression for MT1X gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MT1X expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CCATCCTGAA
About this image MT1X expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table Stem Cell Differentiation: 1 LifeMap Cell Name Category CyT49 (Embryonic Stem Cell)Early Embryo, Inner Cell Mass Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See MT1X Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MT1X SOURCE GeneReport for Unigene cluster: Hs.374950 SABiosciences Custom PCR Arrays for MT1X Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MT1XBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse / rat MT1X QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MT1X QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MT1X
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Orthologsfor MT1X gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for MT1X gene from 2/6 species (see all 6 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
lizard (Anolis carolinensis)
Reptilia
MT36
--
69(a)
1 → many
GL343675.1(182526-186438)
zebrafish (Danio rerio)
Actinopterygii
mt26
metallothionein 2
63(a)
1 → many
18(17193795-17195147)
Species with no ortholog for MT1X ENSEMBL Gene Tree for MT1X (if available)TreeFam Gene Tree for MT1X (if available)
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Paralogsfor MT1X gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for MT1X gene MT1G 2 MT1E 2 MT1F 2 MT1B 2 MT2A 2 MT4 2 MT1M 2 MT3 2 MT1H 2 MT1A 2 14 SIMAP similar genes for MT1X using alignment to 3 protein entries: MT1X_HUMAN (see all proteins ):MT1A MT1L MT1H MT1G MT1B MTP MT1E MT1M MTE MT1F MT1J MT2A MT3 MT4
MT1X for paralogs About GeneDecksing
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Genomic Variantsfor MT1X gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 16 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MT1X (56716336 - 56718108 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for MT1X: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MT1X
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Disorders
/ Diseasesfor MT1X gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MT1X for disorders About GeneDecksing
OMIM gene information: 156359
OMIM disorders : --10 diseases for MT1X : About MalaCards renal cell carcinoma keloids prostate cancer breast cancer hepatocellular carcinoma pancreatic cancer prostatitis pancreatitis carcinoma hypoxia 4 Novoseek disease relationships for MT1X gene About this table
Human Genome Epidemiology (HuGE) Navigator: MT1X (3 documents) Export disorders for MT1X gene to outside databases
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Publicationsfor MT1X gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MT1X gene, integrated from 9 sources (see all 50 ): (articles sorted by number of sources associating them with MT1X) Utopia : connect your pdf to the dynamic world of online information
Characterisation of six additional human metallothionein genes. (PubMed id 8049263) 1 , 2 , 3, 9 Stennard F.A....West A.K. (1994) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Induction by zinc of specific metallothionein isoforms in human monocytes. (PubMed id 8119276) 1 , 2 Pauwels M.... Ley M. (1994) Human metallothionein genes: structure of the functional locus at 16q13. (PubMed id 2286373) 1 , 3 West A.K....Richards R.I. (1990) Metallothionein isoform 1 and 2 gene expression in the human prostate: downregulation of MT-1X in advanced prostate cancer. (PubMed id 10754528) 1 , 9 Garrett S.H....Sens D.A. (2000) Acute exposure to arsenite induces metallothionein isoform-specific gene expression in human proximal tubule cells. (PubMed id 11693492) 1 , 9 Garrett S.H....Sens D.A. (2001) [Cilostazol induces metallothionein expression in vas cular cells] (PubMed id 19881214) 1 , 9 Fujiwara Y....Satoh M. (2009) Metallothionein 1 isoform gene expression induced by cadmium in human peripheral blood lymphocytes. (PubMed id 16827180) 1 , 9 Chang X.L....Zhou Y.F. (2006) Metallothionein isogene transcription in red blood cell precursors from human cord blood. (PubMed id 11168427) 1 , 9 Rahman M.T. and De Ley M. (2001) Metallothionein isoform gene expression in zinc-treated human peripheral blood lymphocytes. (PubMed id 10774930) 1 , 9 Vandeghinste N....De Ley M. (2000)
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External Searches for MT1X gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MT1X gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MT1X gene
(According to HUGE )
About This Section --
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Specialized Databases showing MT1X gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for MT1X Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for MT1X gene: Search GeneIP for patents involving MT1X GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MT1X gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for MT1X OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MT1X OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MT1X OriGene Protein Over-expression Lysate for MT1X Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for MT1X OriGene 3'-UTR Clone for MT1X OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MT1X OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MT1X Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MT1X OriGene Custom Protein Services for MT1X OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MT1X QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MT1X QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MT1X QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MT1X QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MT1X QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MT1X
Search Tocris compounds for MT1X
MT1X Proteins, Antibodies, CLIAs, and ELISAs
Search ThermoFisher Antibodies for MT1X
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MT1X
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Aliases for MT1X
Databases for MT1X
Disorders / Diseases for MT1X
Domains / Families for MT1X
Drugs / Compounds for MT1X
Expression for MT1X
Function for MT1X
Genomic Views for MT1X
Intellectual Property for MT1X
Orthologs for MT1X
Paralogs for MT1X
Pathways / Interactions for MT1X
Products for MT1X
Proteins for MT1X
Publications for MT1X
Search Box for MT1X
Summaries for MT1X
Transcripts for MT1X
Variants for MT1X
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