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Aliases for MT1JP Gene

Aliases for MT1JP Gene

  • Metallothionein 1J, Pseudogene 2 3 5
  • Metallothionein 1N, Pseudogene 2 3
  • Metallothionein 1J (Pseudogene) 3
  • Metallothionein 1M Pseudogene 3
  • Metallothionein 1J 2
  • Metallothionein B 3
  • MT1NP 3
  • MT1J 3
  • MT1 3
  • MTB 3

External Ids for MT1JP Gene

Previous HGNC Symbols for MT1JP Gene

  • MT1
  • MT1NP
  • MT1J

Previous GeneCards Identifiers for MT1JP Gene

  • GC16P055228
  • GC16P056669

Summaries for MT1JP Gene

GeneCards Summary for MT1JP Gene

MT1JP (Metallothionein 1J, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MT1JP Gene

Genomics for MT1JP Gene

Regulatory Elements for MT1JP Gene

Promoters for MT1JP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MT1JP on UCSC Golden Path with GeneCards custom track

Genomic Location for MT1JP Gene

Chromosome:
16
Start:
56,635,739 bp from pter
End:
56,637,086 bp from pter
Size:
1,348 bases
Orientation:
Plus strand

Genomic View for MT1JP Gene

Genes around MT1JP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MT1JP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MT1JP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MT1JP Gene

Proteins for MT1JP Gene

Post-translational modifications for MT1JP Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT1JP Gene

Domains & Families for MT1JP Gene

Gene Families for MT1JP Gene

Suggested Antigen Peptide Sequences for MT1JP Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MT1JP: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MT1JP Gene

Function for MT1JP Gene

Animal Model Products

  • Taconic Biosciences Mouse Models for MT1JP

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT1JP Gene

Localization for MT1JP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MT1JP Gene

Pathways & Interactions for MT1JP Gene

SuperPathways for MT1JP Gene

No Data Available

Interacting Proteins for MT1JP Gene

Gene Ontology (GO) - Biological Process for MT1JP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MT1JP Gene

Drugs & Compounds for MT1JP Gene

No Compound Related Data Available

Transcripts for MT1JP Gene

mRNA/cDNA for MT1JP Gene

Unigene Clusters for MT1JP Gene

Metallothionein 1J, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MT1JP Gene

No ASD Table

Relevant External Links for MT1JP Gene

GeneLoc Exon Structure for
MT1JP
ECgene alternative splicing isoforms for
MT1JP

Expression for MT1JP Gene

mRNA expression in normal human tissues for MT1JP Gene

mRNA differential expression in normal tissues according to GTEx for MT1JP Gene

This gene is overexpressed in Liver (x10.9), Adipose - Visceral (Omentum) (x6.4), and Fallopian Tube (x4.0).

SOURCE GeneReport for Unigene cluster for MT1JP Gene Hs.736648

genes like me logo Genes that share expression patterns with MT1JP: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MT1JP Gene

Orthologs for MT1JP Gene

Evolution for MT1JP Gene

ENSEMBL:
Gene Tree for MT1JP (if available)
TreeFam:
Gene Tree for MT1JP (if available)

No data available for Orthologs for MT1JP Gene

Paralogs for MT1JP Gene

No data available for Paralogs for MT1JP Gene

Variants for MT1JP Gene

Sequence variations from dbSNP and Humsavar for MT1JP Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1827212 -- 56,635,991(+) CGCGC(C/T)CCTGA intron-variant
rs7201401 -- 56,636,549(+) TAAGG(A/T)TGGGA intron-variant
rs9926746 -- 56,634,639(+) TGACT(C/T)ACTAT upstream-variant-2KB
rs12051120 -- 56,636,529(+) CAGGA(A/G)TCTGG intron-variant
rs60007453 -- 56,635,708(+) CCCTT(A/C)CTTGA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MT1JP Gene

Variant ID Type Subtype PubMed ID
nsv906720 CNV Loss 21882294
esv2669588 CNV Deletion 23128226

Relevant External Links for MT1JP Gene

HapMap Linkage Disequilibrium report
MT1JP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MT1JP Gene

Disorders for MT1JP Gene

Relevant External Links for MT1JP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MT1JP

No disorders were found for MT1JP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MT1JP Gene

Publications for MT1JP Gene

  1. Characterisation of six additional human metallothionein genes. (PMID: 8049263) Stennard F.A. … West A.K. (Biochim. Biophys. Acta 1994) 2 3 23 67
  2. Human metallothionein genes: structure of the functional locus at 16q13. (PMID: 2286373) West A.K. … Richards R.I. (Genomics 1990) 2 3
  3. Heavy metal and growth hormone pathways in metallothionein regulation in fish RTH-149 cell line. (PMID: 19154796) Vergani L. … Gallo G. (Comp. Biochem. Physiol. C Toxicol. Pharmacol. 2009) 23
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Polymerase chain reaction amplification and functional characterization of sockeye salmon histone H3, metallothionein-B, and protamine promoters. (PMID: 8180631) Chan W.K. … Devlin R.H. (Mol. Marine Biol. Biotechnol. 1993) 23

Products for MT1JP Gene

Sources for MT1JP Gene

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