Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MT1G Gene

Aliases for MT1G Gene

  • Metallothionein 1G 2 3 5
  • Metallothionein-1K 3 4
  • Metallothionein-IG 3 4
  • MT-1G 3 4
  • MT-1K 3 4
  • MT-IG 3 4
  • MT1K 3 4
  • Metallothionein 1K 2
  • Metallothionein-1G 3
  • MT1M 4
  • MT1 3

External Ids for MT1G Gene

Previous HGNC Symbols for MT1G Gene

  • MT1

Previous GeneCards Identifiers for MT1G Gene

  • GC16M047084
  • GC16M056752
  • GC16M056435
  • GC16M056476
  • GC16M055258
  • GC16M042570
  • GC16M056700

Summaries for MT1G Gene

GeneCards Summary for MT1G Gene

MT1G (Metallothionein 1G) is a Protein Coding gene. Among its related pathways are Copper homeostasis and Response to metal ions. An important paralog of this gene is MT1F.

UniProtKB/Swiss-Prot for MT1G Gene

  • Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids.

Gene Wiki entry for MT1G Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MT1G Gene

Genomics for MT1G Gene

Regulatory Elements for MT1G Gene

Enhancers for MT1G Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G056604 2 FANTOM5 Ensembl ENCODE dbSUPER 11.5 +57.9 57910 10.8 HDGF HNRNPUL1 PKNOX1 FOXA2 MLX ZFP64 WRNIP1 ARID4B SIN3A FEZF1 BBS2 MT1A MT1F MT1G MT1H MT3 MT1DP MT1CP MT1B POLR2C
GH16G056708 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -41.3 -41308 2.3 PKNOX1 ARNT FEZF1 ZNF48 ZBTB40 ZNF766 FOS ZBTB11 NCOA1 ELF1 NUP93 MT1X MT1H MT1G MT3 NLRC5 LOC105371287 LOC105371286
GH16G056908 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.1 -243.3 -243306 5.5 HDGF FOXA2 FEZF1 ZNF48 FOS PAF1 JUNB REST TBX21 SSRP1 HERPUD1 MIR138-2 MT1H MT1G ENSG00000261270 NLRC5 RPS24P17
GH16G056546 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.2 +120.3 120345 2.0 ATF1 TAF1 RBBP5 CHD7 GTF3C2 ZNF366 POLR2A NFE2 ZBTB20 NFE2L2 BBS2 MT3 RSPRY1 MT4 MT1A MT1G MT1H GNAO1
GH16G056603 1.4 Ensembl ENCODE dbSUPER 11.1 +64.2 64202 0.5 ELF3 PKNOX1 ARID4B ZSCAN9 RAD21 RARA ZNF121 ZNF143 MIXL1 ZNF263 MT1G MT1H MT1B MT1X MT1A MT2A MT3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MT1G on UCSC Golden Path with GeneCards custom track

Genomic Location for MT1G Gene

Chromosome:
16
Start:
56,666,731 bp from pter
End:
56,668,065 bp from pter
Size:
1,335 bases
Orientation:
Minus strand

Genomic View for MT1G Gene

Genes around MT1G on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MT1G Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MT1G Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MT1G Gene

Proteins for MT1G Gene

  • Protein details for MT1G Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P13640-MT1G_HUMAN
    Recommended name:
    Metallothionein-1G
    Protein Accession:
    P13640
    Secondary Accessions:
    • P80296

    Protein attributes for MT1G Gene

    Size:
    62 amino acids
    Molecular mass:
    6141 Da
    Quaternary structure:
    • Monomer.

    Alternative splice isoforms for MT1G Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MT1G Gene

Post-translational modifications for MT1G Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for MT1G Gene

No data available for DME Specific Peptides for MT1G Gene

Domains & Families for MT1G Gene

Gene Families for MT1G Gene

Suggested Antigen Peptide Sequences for MT1G Gene

Graphical View of Domain Structure for InterPro Entry

P13640

UniProtKB/Swiss-Prot:

MT1G_HUMAN :
  • Class I metallothioneins contain 2 metal-binding domains: four divalent ions are chelated within cluster A of the alpha domain and are coordinated via cysteinyl thiolate bridges to 11 cysteine ligands. Cluster B, the corresponding region within the beta domain, can ligate three divalent ions to 9 cysteines.
  • Belongs to the metallothionein superfamily. Type 1 family.
Domain:
  • Class I metallothioneins contain 2 metal-binding domains: four divalent ions are chelated within cluster A of the alpha domain and are coordinated via cysteinyl thiolate bridges to 11 cysteine ligands. Cluster B, the corresponding region within the beta domain, can ligate three divalent ions to 9 cysteines.
Family:
  • Belongs to the metallothionein superfamily. Type 1 family.
genes like me logo Genes that share domains with MT1G: view

Function for MT1G Gene

Molecular function for MT1G Gene

GENATLAS Biochemistry:
metallothionein 1G cluster
UniProtKB/Swiss-Prot Function:
Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids.

Gene Ontology (GO) - Molecular Function for MT1G Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 12646258
GO:0008270 zinc ion binding IDA 8119276
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with MT1G: view

Phenotypes for MT1G Gene

GenomeRNAi human phenotypes for MT1G:
genes like me logo Genes that share phenotypes with MT1G: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT1G Gene

Localization for MT1G Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MT1G gene
Compartment Confidence
nucleus 5
extracellular 3
cytosol 1

Gene Ontology (GO) - Cellular Components for MT1G Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA 7559655
GO:0005737 cytoplasm IDA 3403543
GO:0048471 perinuclear region of cytoplasm IDA 15735762
genes like me logo Genes that share ontologies with MT1G: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for MT1G Gene

Pathways & Interactions for MT1G Gene

genes like me logo Genes that share pathways with MT1G: view

Pathways by source for MT1G Gene

2 BioSystems pathways for MT1G Gene
1 KEGG pathway for MT1G Gene

Interacting Proteins for MT1G Gene

Gene Ontology (GO) - Biological Process for MT1G Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0030224 monocyte differentiation NAS 8119276
GO:0035924 cellular response to vascular endothelial growth factor stimulus IEP 15735762
GO:0042117 monocyte activation NAS 8119276
GO:0045926 negative regulation of growth IDA 18332874
GO:0071276 cellular response to cadmium ion IEP 3403543
genes like me logo Genes that share ontologies with MT1G: view

No data available for SIGNOR curated interactions for MT1G Gene

Drugs & Compounds for MT1G Gene

(3) Drugs for MT1G Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(1) Additional Compounds for MT1G Gene - From: Novoseek and HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
cadmium
  • Cadmium atom
  • Cadmium elemental
  • Cadmium metallicum
  • Cd
  • Colloidal cadmium
7440-43-9
genes like me logo Genes that share compounds with MT1G: view

Transcripts for MT1G Gene

mRNA/cDNA for MT1G Gene

Unigene Clusters for MT1G Gene

Metallothionein 1G:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MT1G Gene

No ASD Table

Relevant External Links for MT1G Gene

GeneLoc Exon Structure for
MT1G
ECgene alternative splicing isoforms for
MT1G

Expression for MT1G Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MT1G Gene

mRNA differential expression in normal tissues according to GTEx for MT1G Gene

This gene is overexpressed in Liver (x24.3), Kidney - Cortex (x7.1), and Pancreas (x5.3).

Protein differential expression in normal tissues from HIPED for MT1G Gene

This gene is overexpressed in Fetal Liver (64.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for MT1G Gene



Protein tissue co-expression partners for MT1G Gene

NURSA nuclear receptor signaling pathways regulating expression of MT1G Gene:

MT1G

SOURCE GeneReport for Unigene cluster for MT1G Gene:

Hs.433391

Evidence on tissue expression from TISSUES for MT1G Gene

  • Liver(4.6)
  • Thyroid gland(3)
  • Kidney(2.9)
  • Pancreas(2.4)
  • Stomach(2.1)
genes like me logo Genes that share expression patterns with MT1G: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for MT1G Gene

Orthologs for MT1G Gene

This gene was present in the common ancestor of mammals.

Orthologs for MT1G Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 97 (a)
OneToMany
MT1G 35
  • 95 (a)
OneToMany
dog
(Canis familiaris)
Mammalia MT2A 35
  • 92 (a)
OneToMany
cow
(Bos Taurus)
Mammalia MT2 35
  • 89 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Mt1 35
  • 82 (a)
ManyToMany
Species where no ortholog for MT1G was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MT1G Gene

ENSEMBL:
Gene Tree for MT1G (if available)
TreeFam:
Gene Tree for MT1G (if available)

Paralogs for MT1G Gene

Paralogs for MT1G Gene

(12) SIMAP similar genes for MT1G Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with MT1G: view

Variants for MT1G Gene

Sequence variations from dbSNP and Humsavar for MT1G Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000057034 -- 56,666,979(+) GGGAG(C/G)AAAGG intron-variant
rs1000231292 -- 56,669,234(+) GGGAG(A/G)CAGGG upstream-variant-2KB
rs1000260807 -- 56,669,429(+) TGCAC(C/T)GGGAC upstream-variant-2KB
rs1001898498 -- 56,666,669(+) GTCTA(A/G)ACTCC downstream-variant-500B
rs1004767919 -- 56,668,896(+) GGGTC(C/T)GTGTT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MT1G Gene

Variant ID Type Subtype PubMed ID
dgv2988n100 CNV gain 25217958
dgv2989n100 CNV gain 25217958
dgv480n67 CNV loss 20364138
dgv481n67 CNV loss 20364138
dgv524e214 CNV gain 21293372
nsv1058153 CNV gain 25217958
nsv827679 CNV loss 20364138
nsv827682 CNV gain 20364138
nsv974819 CNV duplication 23825009

Variation tolerance for MT1G Gene

Residual Variation Intolerance Score: 80.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.70; 14.79% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MT1G Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MT1G

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MT1G Gene

Disorders for MT1G Gene

Relevant External Links for MT1G

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MT1G

No disorders were found for MT1G Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MT1G Gene

Publications for MT1G Gene

  1. Induction by zinc of specific metallothionein isoforms in human monocytes. (PMID: 8119276) Pauwels M. … Ley M. (Eur. J. Biochem. 1994) 3 4 22 64
  2. Structure and expression of the human metallothionein-IG gene. Differential promoter activity of two linked metallothionein-I genes in response to heavy metals. (PMID: 3403543) Foster R. … Gedamu L. (J. Biol. Chem. 1988) 2 3 4 64
  3. Detection of metallothionein 1G as a methylated tumor suppressor gene in human hepatocellular carcinoma using a novel method of double combination array analysis. (PMID: 19639168) Kanda M. … Nakao A. (Int. J. Oncol. 2009) 3 22 64
  4. Metallothionein 1 isoform gene expression induced by cadmium in human peripheral blood lymphocytes. (PMID: 16827180) Chang X.L. … Zhou Y.F. (Biomed. Environ. Sci. 2006) 3 22 64
  5. Induction of human metallothionein 1G promoter by VEGF and heavy metals: differential involvement of E2F and metal transcription factors. (PMID: 15735762) Joshi B. … Chellappan S. (Oncogene 2005) 3 22 64

Products for MT1G Gene

Sources for MT1G Gene

Content
Loading form....