MT1E Gene
protein-coding GIFtS : 49
GCID: GC16 P056659
metallothionein 1E (Previous symbol: MT1 )
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Aliasesfor MT1E gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Metallothionein 1E 1 2 Metallothionein 1E (Functional)2 MT11 2 Metallothionein D2 MTD1 2 Metallothionein-1E1 MT-1E2 3 Metallothionein-IE3 MT-IE2 3 Metallothionein-IE3
Export aliases for MT1E gene to outside databases Previous GC identifers: GC16U990040 GC16M056702 GC16P056387 GC16P056429 GC16P056435 GC16P055216
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Summariesfor MT1E gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: MT1E_HUMAN, P04732 Function : Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins aretranscriptionally regulated by both heavy metals and glucocorticoids Gene Wiki entry for MT1E
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Genomic Viewsfor MT1E gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000016.9 NC_018927.1 NT_010498.15 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MT1E gene promoter: GR TBP Sp1 TFIID GR-beta GR-alpha Other transcription factors Search SABiosciences Chromatin IP Primers for MT1E Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MT1E
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 16q13 Ensembl cytogenetic band: 16q12.2 HGNC cytogenetic band: 16q13 MT1E Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 16 GeneLoc Exon Structure
GeneLoc location for GC16P056659: view genomic region
(about GC identifiers )
Start:
56,659,387 bp from pter
End:
56,661,024 bp from pter
Size:
1,638 bases
Orientation:
plus strand
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Proteinsfor MT1E gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: MT1E_HUMAN, P04732 (See
protein sequence )Recommended Name: Metallothionein-1E Size : 61 amino acids; 6014 Da
Subunit : Monomer
Secondary accessions : A2RRF7 Q86YX4 Q8TD51Alternative splicing : 2 isoforms : P04732-1 P04732-2 Explore the universe of human proteins at neXtProt for MT1E: NX_P04732 MT1E Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_783316.2 ENSEMBL proteins: ENSP00000307706 ENSP00000457516 ENSP00000328137 Human Recombinant Protein Products: Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view) : About this table
MT1E for ontologies About GeneDecksing MT1E Antibody Products: Assay Products for MT1E:
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Protein
Domains / Familiesfor MT1E gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MT1E for domains About GeneDecksing 5 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P04732 ProtoNet protein and cluster: P04732
1 Blocks protein family : IPB002400 Growth factor cystine knot superfamily signature UniProtKB/Swiss-Prot: MT1E_HUMAN, P04732 Domain : Class I metallothioneins contain 2 metal-binding domains: four divalent ions are chelated within cluster A ofthe alpha domain and are coordinated via cysteinyl thiolate bridges to 11 cysteine ligands. Cluster B, the corresponding region within the beta domain, can ligate three divalent ions to 9 cysteines Similarity : Belongs to the metallothionein superfamily. Type 1 family
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Functionfor MT1E gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: MT1E_HUMAN, P04732 Function : Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins aretranscriptionally regulated by both heavy metals and glucocorticoids
Genatlas biochemistry entry for MT1E : metallothionein 1E cluster Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MT1E OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MT1EOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MT1E (NM_175617 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MT1E Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MT1E
Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view) : About this table
MT1E for ontologies About GeneDecksing
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Pathways & Interactionsfor MT1E gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Mineral absorption
Pathway sources See GeneCards unified pathways Show all pathways 1
Kegg Pathway (Kegg details for MT1E) :
MT1E for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MT1E Gene Ontology (GO): 3 biological process terms (GO ID links to tree view) : About this table
MT1E for ontologies About GeneDecksing
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Drugs & Compoundsfor MT1E gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
MT1E for compounds About GeneDecksing Browse Tocris compounds for MT1E 1 HMDB Compound for MT1E About this table 5 Novoseek chemical compound relationships for MT1E gene About this table
Search CenterWatch for drugs/clinical trials and news about MT1E
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Transcriptsfor MT1E gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MT1E gene: NM_175617.3 Unigene Cluster for MT1E:
Metallothionein 1E Hs.534330 [show with all ESTs ] Unigene Representative Sequence: BU535774 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000306061 (uc002ejl.3 ) ENST00000568293 ENST00000330439 (uc002ejm.3 )Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MT1E OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MT1EOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MT1E (NM_175617 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MT1E Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MT1E
Additional cDNA sequence: BC009699.2 BC062734.1 BC131609.1
16 DOTS entries : DT.219306 DT.218152
DT.95236153 DT.100800149 DT.101982092 DT.95167555 DT.219307 DT.120684829 DT.120684801 DT.95167556 DT.91961039 DT.121416733 DT.100839246 DT.120684912 DT.91808924 DT.95071762 24/231 AceView cDNA sequences (see all 231 ):
BX458790 AW043998 NM_005954 BU176013 BX281399 AU107621 BI439088 AW055185 BG180522 BM887687 AW951992 AJ705828 AJ573411 BQ181442 BQ050782 AJ709369 BQ433067 BQ430119 BM817906 CR595825 AJ713317 D28442 CR621046 AW026555 GeneLoc Exon Structure
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Expression for MT1E gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MT1E expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: --
About this image MT1E expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table Stem Cell Differentiation: 2 LifeMap Cells Name Category PureStem™ progenitor EN2 (Embryonic Progenitor Cell)Matrigel embedded cells (Derivation of cardio... )Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See MT1E Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MT1E SOURCE GeneReport for Unigene cluster: Hs.534330 SABiosciences Custom PCR Arrays for MT1E Primer Products: Browse OriGene genome-wide validated SYBR primer pairs Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat MT1E QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MT1E QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MT1E
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Orthologsfor MT1E gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for MT1E gene from 2/9 species (see all 9 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
lizard (Anolis carolinensis)
Reptilia
MT36
--
76(a)
1 → many
GL343675.1(182526-186438)
zebrafish (Danio rerio)
Actinopterygii
mt26
metallothionein 2
67(a)
1 → many
18(17193795-17195147)
ENSEMBL Gene Tree for MT1E (if available)TreeFam Gene Tree for MT1E (if available)
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Paralogsfor MT1E gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for MT1E gene MT1G 2 MT1X 2 MT1F 2 MT1B 2 MT2A 2 MT4 2 MT1M 2 MT1A 2 MT3 2 MT1H 2 14 SIMAP similar genes for MT1E using alignment to 2 protein entries: MT1E_HUMAN (see all proteins ):MT1H MT1J MTE MT1X MT1G MT1F MT1M MT1A MT1L MT4 MT3 MT1B MTP MT2A
MT1E for paralogs About GeneDecksing 2 Pseudogenes.org Pseudogenes for MT1E PGOHUM00000249143 PGOHUM00000259531
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Genomic Variantsfor MT1E gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 16 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MT1E (56659387 - 56661024 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for MT1E: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MT1E
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Disorders
/ Diseasesfor MT1E gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MT1E for disorders About GeneDecksing
OMIM gene information: 156351
OMIM disorders : --16 diseases for MT1E : About MalaCards type 2 diabetes mellitus amyotrophic lateral sclerosis lateral sclerosis diabetes mellitus acute lymphoblastic leukemia lymphoblastic leukemia renal cell carcinoma endometrial carcinoma prostate cancer breast cancer nasopharyngitis pancreatic cancer leukemia prostatitis pancreatitis carcinoma 5 Novoseek disease relationships for MT1E gene About this table
Human Genome Epidemiology (HuGE) Navigator: MT1E (1 document)Export disorders for MT1E gene to outside databases
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Publicationsfor MT1E gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MT1E gene, integrated from 9 sources (see all 60 ): (articles sorted by number of sources associating them with MT1E) Utopia : connect your pdf to the dynamic world of online information
Structure and expression of two human metallothionein-I isoform genes and a related pseudogene. (PubMed id 2581970) 1 , 2 , 3 Schmidt C.J....Hamer D.H. (1985) Induction by zinc of specific metallothionein isoforms in human monocytes. (PubMed id 8119276) 1 , 2 , 9 Pauwels M.... Ley M. (1994) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Human metallothionein genes are clustered on chromosome 16. (PubMed id 6089206) 1 , 3 Karin M....Shows T.B. (1984) Epigenetic alteration of the metallothionein 1E gene in human endometrial carcinomas. (PubMed id 19420986) 1 , 9 Tse K.Y....Ngan H.Y. (2009) Overlapping gene expression profiles of cell migration and tumor invasion in human bladder cancer identify metallothionein 1E and nicotinamide N-methyltransferase as novel regulators of cell migration. (PubMed id 18724390) 1 , 9 Wu Y....Theodorescu D. (2008) Metallothionein isoform gene expression in zinc-treated human peripheral blood lymphocytes. (PubMed id 10774930) 1 , 9 Vandeghinste N....De Ley M. (2000) Isoform-specific expression of metallothionein mRNA in the developing and adult human kidney. (PubMed id 8619255) 1 , 9 Mididoddi S....Sens D.A. (1996) Metallothionein 1 isoform gene expression induced by cadmium in human peripheral blood lymphocytes. (PubMed id 16827180) 1 , 9 Chang X.L....Zhou Y.F. (2006) Metallothionein isoform 1 and 2 gene expression in a human urothelial cell line (UROtsa) exposed to CdCl2 and NaAsO2. (PubMed id 14555400) 1 , 9 Sens D....Somji S. (2003)
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External Searches for MT1E gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MT1E gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MT1E gene
(According to HUGE )
About This Section --
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Specialized Databases showing MT1E gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for MT1E Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for MT1E gene: Search GeneIP for patents involving MT1E GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MT1E gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for MT1E OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MT1E Browse OriGene genome-wide validated SYBR primer pairs OriGene Protein Over-expression Lysate for MT1E Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for MT1E OriGene 3'-UTR Clone for MT1E OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MT1E OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MT1E Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for MT1E OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MT1E OriGene Custom Protein Services for MT1E OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MT1E QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MT1E QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MT1E QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MT1E QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MT1E QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MT1E
Search Tocris compounds for MT1E
MT1E Proteins, Antibodies, CLIAs, and ELISAs
Search ThermoFisher Antibodies for MT1E
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MT1E
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Aliases for MT1E
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Disorders / Diseases for MT1E
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Drugs / Compounds for MT1E
Expression for MT1E
Function for MT1E
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Pathways / Interactions for MT1E
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Transcripts for MT1E
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