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Aliases for MT1CP Gene

Aliases for MT1CP Gene

  • Metallothionein 1C, Pseudogene 2 3 5

External Ids for MT1CP Gene

Previous GeneCards Identifiers for MT1CP Gene

  • GC16U990038
  • GC16P055240
  • GC16P056681
  • GC16P042551

Summaries for MT1CP Gene

GeneCards Summary for MT1CP Gene

MT1CP (Metallothionein 1C, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MT1CP Gene

Genomics for MT1CP Gene

Regulatory Elements for MT1CP Gene

Enhancers for MT1CP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F056616 0.2 ENCODE 11.4 -29.9 -29859 1.9 RNF2 POLR2A SUZ12 CBX2 CTBP2 RAD21 MT1A MT1F MT1G MT1H MT1CP MT1DP MT1B MT3 MT1E MT1X
GH16F056604 1.5 FANTOM5 Ensembl ENCODE 11.4 -37.5 -37534 10.8 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 BBS2 MT1A MT1F MT1G MT1H MT3 MT1DP MT1CP MT1B MT1X
GH16F056576 0.5 Ensembl ENCODE 11.4 -70.5 -70490 0.9 PKNOX1 ARID4B ZNF48 YY1 ZNF207 ZNF143 ZNF263 MIER2 REST TBX21 MT1DP MT1CP MT1X MT1F MT1B MT4 GC16P056575 MT3
GH16F056657 0.6 ENCODE 9.9 +10.4 10355 1.9 PKNOX1 KLF17 ARID4B DMAP1 ZNF48 RAD21 THRB RARA GLIS2 FOS MT1CP MT1L MT1X MT1E MT1F LOC101927536
GH16F056867 0.9 Ensembl ENCODE 5.1 +219.8 219812 1.0 ELF3 CTCF ZNF654 TRIM22 REST RAD21 GLIS1 IKZF1 ZNF143 SMC3 HERPUD1 MT1CP SLC12A3 MIR6863
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MT1CP on UCSC Golden Path with GeneCards custom track

Genomic Location for MT1CP Gene

Chromosome:
16
Start:
56,647,689 bp from pter
End:
56,649,514 bp from pter
Size:
1,826 bases
Orientation:
Plus strand

Genomic View for MT1CP Gene

Genes around MT1CP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MT1CP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MT1CP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MT1CP Gene

Proteins for MT1CP Gene

Post-translational modifications for MT1CP Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT1CP Gene

Domains & Families for MT1CP Gene

Gene Families for MT1CP Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MT1CP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MT1CP Gene

Function for MT1CP Gene

Molecular function for MT1CP Gene

GENATLAS Biochemistry:
metallothionein 1CP cluster

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT1CP Gene

Localization for MT1CP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MT1CP Gene

Pathways & Interactions for MT1CP Gene

SuperPathways for MT1CP Gene

No Data Available

Interacting Proteins for MT1CP Gene

Gene Ontology (GO) - Biological Process for MT1CP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MT1CP Gene

Transcripts for MT1CP Gene

mRNA/cDNA for MT1CP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MT1CP Gene

No ASD Table

Relevant External Links for MT1CP Gene

GeneLoc Exon Structure for
MT1CP
ECgene alternative splicing isoforms for
MT1CP

Expression for MT1CP Gene

mRNA expression in normal human tissues for MT1CP Gene

mRNA differential expression in normal tissues according to GTEx for MT1CP Gene

This gene is overexpressed in Liver (x33.0).

Protein differential expression in normal tissues from HIPED for MT1CP Gene

This gene is overexpressed in Skin (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for MT1CP Gene



Protein tissue co-expression partners for MT1CP Gene

NURSA nuclear receptor signaling pathways regulating expression of MT1CP Gene:

MT1CP
genes like me logo Genes that share expression patterns with MT1CP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for MT1CP Gene

Orthologs for MT1CP Gene

Evolution for MT1CP Gene

ENSEMBL:
Gene Tree for MT1CP (if available)
TreeFam:
Gene Tree for MT1CP (if available)

No data available for Orthologs for MT1CP Gene

Paralogs for MT1CP Gene

No data available for Paralogs for MT1CP Gene

Variants for MT1CP Gene

Relevant External Links for MT1CP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MT1CP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MT1CP Gene

Disorders for MT1CP Gene

No disorders were found for MT1CP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MT1CP Gene

Publications for MT1CP Gene

  1. Structure and tissue-specific expression of the human metallothionein IB gene. (PMID: 3785191) Heguy A. … Karin M. (Mol. Cell. Biol. 1986) 2 3 64
  2. Human metallothionein genes are clustered on chromosome 16. (PMID: 6089206) Karin M. … Shows T.B. (Proc. Natl. Acad. Sci. U.S.A. 1984) 2 3 64
  3. Structural and functional analysis of the human metallothionein-IA gene: differential induction by metal ions and glucocorticoids. (PMID: 6327055) Richards R.I. … Karin M. (Cell 1984) 2 3 64
  4. Human metallothionein genes: structure of the functional locus at 16q13. (PMID: 2286373) West A.K. … Richards R.I. (Genomics 1990) 3 64

Products for MT1CP Gene

Sources for MT1CP Gene

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