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Aliases for MT-TR Gene

Subcategory (RNA class) for MT-TR Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MT-TR Gene

  • Mitochondrially Encoded TRNA Arginine 2 5
  • TRNA Arginine 2
  • TRNA 3
  • TRNR 3
  • MTTR 3

External Ids for MT-TR Gene

Previous HGNC Symbols for MT-TR Gene

  • MTTR

Previous GeneCards Identifiers for MT-TR Gene

  • GC00U921611

Summaries for MT-TR Gene

GeneCards Summary for MT-TR Gene

MT-TR (Mitochondrially Encoded TRNA Arginine) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with MT-TR include Mitochondrial Disorders. Among its related pathways are tRNA Aminoacylation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MT-TR Gene

Genomics for MT-TR Gene

Genomic Location for MT-TR Gene

Chromosome:
MT
Start:
10,405 bp from pter
End:
10,469 bp from pter
Size:
65 bases
Orientation:
Plus strand

Genomic View for MT-TR Gene

Genes around MT-TR on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for MT-TR Gene

No data available for Regulatory Elements for MT-TR Gene

Proteins for MT-TR Gene

Post-translational modifications for MT-TR Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT-TR Gene

Domains & Families for MT-TR Gene

Gene Families for MT-TR Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MT-TR: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MT-TR Gene

Function for MT-TR Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT-TR Gene

Localization for MT-TR Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MT-TR Gene COMPARTMENTS Subcellular localization image for MT-TR gene
Compartment Confidence
chloroplast 2
mitochondrion 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for MT-TR Gene

Pathways & Interactions for MT-TR Gene

SuperPathways for MT-TR Gene

Superpath Contained pathways
1 tRNA Aminoacylation
genes like me logo Genes that share pathways with MT-TR: view

Pathways by source for MT-TR Gene

1 KEGG pathway for MT-TR Gene

Interacting Proteins for MT-TR Gene

Gene Ontology (GO) - Biological Process for MT-TR Gene

None

No data available for SIGNOR curated interactions for MT-TR Gene

Drugs & Compounds for MT-TR Gene

No Compound Related Data Available

Transcripts for MT-TR Gene

mRNA/cDNA for MT-TR Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MT-TR Gene

No ASD Table

Relevant External Links for MT-TR Gene

GeneLoc Exon Structure for
MT-TR
ECgene alternative splicing isoforms for
MT-TR

Expression for MT-TR Gene

mRNA expression in normal human tissues for MT-TR Gene

genes like me logo Genes that share expression patterns with MT-TR: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MT-TR Gene

Orthologs for MT-TR Gene

Evolution for MT-TR Gene

ENSEMBL:
Gene Tree for MT-TR (if available)
TreeFam:
Gene Tree for MT-TR (if available)

No data available for Orthologs for MT-TR Gene

Paralogs for MT-TR Gene

No data available for Paralogs for MT-TR Gene

Variants for MT-TR Gene

Relevant External Links for MT-TR Gene

Human Gene Mutation Database (HGMD)
MT-TR

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MT-TR Gene

Disorders for MT-TR Gene

MalaCards: The human disease database

(1) MalaCards diseases for MT-TR Gene - From: GeneTests

Disorder Aliases PubMed IDs
mitochondrial disorders
  • mitochondrial encephalomyopathies
- elite association - COSMIC cancer census association via MalaCards
Search MT-TR in MalaCards View complete list of genes associated with diseases

Relevant External Links for MT-TR

Genetic Association Database (GAD)
MT-TR
genes like me logo Genes that share disorders with MT-TR: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MT-TR Gene

Publications for MT-TR Gene

  1. Molecular epidemiology of childhood mitochondrial encephalomyopathies in a Finnish population: sequence analysis of entire mtDNA of 17 children reveals heteroplasmic mutations in tRNAArg, tRNAGlu, and tRNALeu(UUR) genes. (PMID: 15286228) Uusimaa J. … Majamaa K. (Pediatrics 2004) 3 48 67
  2. A novel mitochondrial tRNA Arg mutation resulting in an anticodon swap in a patient with mitochondrial encephalomyopathy. (PMID: 22781096) Roos S. … Oldfors A. (Eur. J. Hum. Genet. 2013) 3
  3. MtSNPscore: a combined evidence approach for assessing cumulative impact of mitochondrial variations in disease. (PMID: 19758471) Bhardwaj A. … Tiwari S. (BMC Bioinformatics 2009) 3
  4. Comprehensive analysis of common mitochondrial DNA variants and colorectal cancer risk. (PMID: 19050702) Webb E. … Houlston R.S. (Br. J. Cancer 2008) 3
  5. Genetic polymorphisms of methylenetetrahydrofolate reductase (MTHFR) and methionine synthase reductase (MTRR) in ethnic populations in Texas; a report of a novel MTHFR polymorphic site, G1793A. (PMID: 11807892) Rady P.L. … Matalon R.K. (Am. J. Med. Genet. 2002) 3

Products for MT-TR Gene

Sources for MT-TR Gene

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