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Aliases for MT-TP Gene

Subcategory (RNA class) for MT-TP Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MT-TP Gene

  • Mitochondrially Encoded TRNA Proline 2 5
  • TRNA Proline 2
  • TRNA 3
  • TRNP 3
  • MTTP 3

External Ids for MT-TP Gene

Previous HGNC Symbols for MT-TP Gene

  • MTTP

Previous GeneCards Identifiers for MT-TP Gene

  • GC00U921609

Summaries for MT-TP Gene

GeneCards Summary for MT-TP Gene

MT-TP (Mitochondrially Encoded TRNA Proline) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with MT-TP include merrf syndrome. Among its related pathways are Lipoprotein metabolism and Metabolism.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MT-TP Gene

Genomics for MT-TP Gene

Genomic Location for MT-TP Gene

Chromosome:
MT
Start:
15,956 bp from pter
End:
16,023 bp from pter
Size:
68 bases
Orientation:
Minus strand

Genomic View for MT-TP Gene

Genes around MT-TP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for MT-TP Gene

No data available for Regulatory Elements for MT-TP Gene

Proteins for MT-TP Gene

Post-translational modifications for MT-TP Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT-TP Gene

Domains & Families for MT-TP Gene

Gene Families for MT-TP Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MT-TP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MT-TP Gene

Function for MT-TP Gene

Human Phenotype Ontology for MT-TP Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Model Products

  • Taconic Biosciences Mouse Models for MT-TP

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT-TP Gene

Localization for MT-TP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MT-TP Gene

Pathways & Interactions for MT-TP Gene

genes like me logo Genes that share pathways with MT-TP: view

Pathways by source for MT-TP Gene

Interacting Proteins for MT-TP Gene

Gene Ontology (GO) - Biological Process for MT-TP Gene

None

No data available for SIGNOR curated interactions for MT-TP Gene

Drugs & Compounds for MT-TP Gene

No Compound Related Data Available

Transcripts for MT-TP Gene

mRNA/cDNA for MT-TP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MT-TP Gene

No ASD Table

Relevant External Links for MT-TP Gene

GeneLoc Exon Structure for
MT-TP
ECgene alternative splicing isoforms for
MT-TP

Expression for MT-TP Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MT-TP Gene

Orthologs for MT-TP Gene

Evolution for MT-TP Gene

ENSEMBL:
Gene Tree for MT-TP (if available)
TreeFam:
Gene Tree for MT-TP (if available)

No data available for Orthologs for MT-TP Gene

Paralogs for MT-TP Gene

No data available for Paralogs for MT-TP Gene

Variants for MT-TP Gene

Relevant External Links for MT-TP Gene

HapMap Linkage Disequilibrium report
MT-TP
Human Gene Mutation Database (HGMD)
MT-TP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MT-TP Gene

Disorders for MT-TP Gene

MalaCards: The human disease database

(1) MalaCards diseases for MT-TP Gene - From: ClinVar and Orphanet

Disorder Aliases PubMed IDs
merrf syndrome
  • fukuhara syndrome
- elite association - COSMIC cancer census association via MalaCards
Search MT-TP in MalaCards View complete list of genes associated with diseases
genes like me logo Genes that share disorders with MT-TP: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for MT-TP Gene

Publications for MT-TP Gene

  1. Mitochondrial polymorphisms are associated both with increased and decreased longevity. (PMID: 19077432) Castri L. … Madrigal L. (Hum. Hered. 2009) 3 67
  2. MtSNPscore: a combined evidence approach for assessing cumulative impact of mitochondrial variations in disease. (PMID: 19758471) Bhardwaj A. … Tiwari S. (BMC Bioinformatics 2009) 3
  3. Mitochondrial Disorders Overview (PMID: 20301403) Pagon R.A. … Stephens K. ( 1993) 3
  4. MERRF (PMID: 20301693) Pagon R.A. … Stephens K. ( 1993) 3

Products for MT-TP Gene

Sources for MT-TP Gene

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