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Aliases for MT-TN Gene

Subcategory (RNA class) for MT-TN Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for MT-TN Gene

  • Mitochondrially Encoded TRNA Asparagine 2 5
  • TRNA Asparagine 2
  • TRNA 3
  • TRNN 3
  • MTTN 3

External Ids for MT-TN Gene

Previous HGNC Symbols for MT-TN Gene

  • MTTN

Previous GeneCards Identifiers for MT-TN Gene

  • GC00U921608

Summaries for MT-TN Gene

GeneCards Summary for MT-TN Gene

MT-TN (Mitochondrially Encoded TRNA Asparagine) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with MT-TN include Maternally-Inherited Progressive External Ophthalmoplegia and Mitochondrial Complex Iv Deficiency. Among its related pathways are tRNA Aminoacylation.

Additional gene information for MT-TN Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MT-TN Gene

Genomics for MT-TN Gene

Genomic Locations for MT-TN Gene

Genomic Locations for MT-TN Gene
73 bases
Minus strand

Genomic View for MT-TN Gene

Genes around MT-TN on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for MT-TN Gene

No data available for GeneHancer (GH) Regulatory Elements for MT-TN Gene

Proteins for MT-TN Gene

Post-translational modifications for MT-TN Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT-TN Gene

Domains & Families for MT-TN Gene

Gene Families for MT-TN Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MT-TN: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MT-TN Gene

Function for MT-TN Gene

Human Phenotype Ontology for MT-TN Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT-TN Gene

Localization for MT-TN Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MT-TN gene
Compartment Confidence
mitochondrion 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MT-TN Gene

Pathways & Interactions for MT-TN Gene

SuperPathways for MT-TN Gene

SuperPathway Contained pathways
1 tRNA Aminoacylation
genes like me logo Genes that share pathways with MT-TN: view

Pathways by source for MT-TN Gene

1 KEGG pathway for MT-TN Gene

Interacting Proteins for MT-TN Gene

Gene Ontology (GO) - Biological Process for MT-TN Gene


No data available for SIGNOR curated interactions for MT-TN Gene

Drugs & Compounds for MT-TN Gene

No Compound Related Data Available

Transcripts for MT-TN Gene

mRNA/cDNA for MT-TN Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MT-TN Gene

No ASD Table

Relevant External Links for MT-TN Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MT-TN Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MT-TN Gene

genes like me logo Genes that share expression patterns with MT-TN: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MT-TN Gene

Orthologs for MT-TN Gene

Evolution for MT-TN Gene

Gene Tree for MT-TN (if available)
Gene Tree for MT-TN (if available)

No data available for Orthologs for MT-TN Gene

Paralogs for MT-TN Gene

No data available for Paralogs for MT-TN Gene

Variants for MT-TN Gene

Additional Variant Information for MT-TN Gene

Human Gene Mutation Database (HGMD)
SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MT-TN Gene

Disorders for MT-TN Gene

MalaCards: The human disease database

(3) MalaCards diseases for MT-TN Gene - From: ClinVar, GTR, and Orphanet

Disorder Aliases PubMed IDs
maternally-inherited progressive external ophthalmoplegia
  • maternally-inherited cpeo
mitochondrial complex iv deficiency
  • cytochrome c oxidase deficiency
mitochondrial complex i deficiency
  • nadh:q(1) oxidoreductase deficiency
- elite association - COSMIC cancer census association via MalaCards
Search MT-TN in MalaCards View complete list of genes associated with diseases
genes like me logo Genes that share disorders with MT-TN: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for MT-TN Gene

Publications for MT-TN Gene

  1. MtSNPscore: a combined evidence approach for assessing cumulative impact of mitochondrial variations in disease. (PMID: 19758471) Bhardwaj A … Tiwari S (BMC bioinformatics 2009) 3 58
  2. Comprehensive analysis of common mitochondrial DNA variants and colorectal cancer risk. (PMID: 19050702) Webb E … Houlston RS (British journal of cancer 2008) 3 58

Products for MT-TN Gene

Sources for MT-TN Gene

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