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Aliases for MT-TF Gene

Subcategory (RNA class) for MT-TF Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MT-TF Gene

  • Mitochondrially Encoded TRNA Phenylalanine 2
  • TRNA Phenylalanine 2
  • TRNA 3
  • TRNF 3

External Ids for MT-TF Gene

Previous HGNC Symbols for MT-TF Gene

  • MTTF

Previous GeneCards Identifiers for MT-TF Gene

  • GC00U921600

Summaries for MT-TF Gene

GeneCards Summary for MT-TF Gene

MT-TF (Mitochondrially Encoded TRNA Phenylalanine) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with MT-TF include melas, mt-tf-related and merrf syndrome. Among its related pathways are tRNA Aminoacylation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MT-TF Gene

Genomics for MT-TF Gene

Genomic Location for MT-TF Gene

Chromosome:
MT
Start:
577 bp from pter
End:
647 bp from pter
Size:
71 bases
Orientation:
Plus strand

Genomic View for MT-TF Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for MT-TF Gene

No data available for Regulatory Elements for MT-TF Gene

Proteins for MT-TF Gene

Post-translational modifications for MT-TF Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT-TF Gene

Domains & Families for MT-TF Gene

Gene Families for MT-TF Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MT-TF: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MT-TF Gene

Function for MT-TF Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT-TF Gene

Localization for MT-TF Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MT-TF Gene COMPARTMENTS Subcellular localization image for MT-TF gene
Compartment Confidence
chloroplast 3
mitochondrion 2
nucleus 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for MT-TF Gene

Pathways & Interactions for MT-TF Gene

SuperPathways for MT-TF Gene

Superpath Contained pathways
1 tRNA Aminoacylation
genes like me logo Genes that share pathways with MT-TF: view

Pathways by source for MT-TF Gene

1 KEGG pathway for MT-TF Gene

Interacting Proteins for MT-TF Gene

Gene Ontology (GO) - Biological Process for MT-TF Gene

None

No data available for SIGNOR curated interactions for MT-TF Gene

Drugs & Compounds for MT-TF Gene

No Compound Related Data Available

Transcripts for MT-TF Gene

mRNA/cDNA for MT-TF Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MT-TF Gene

No ASD Table

Relevant External Links for MT-TF Gene

GeneLoc Exon Structure for
MT-TF
ECgene alternative splicing isoforms for
MT-TF

Expression for MT-TF Gene

mRNA expression in normal human tissues for MT-TF Gene

genes like me logo Genes that share expression patterns with MT-TF: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MT-TF Gene

Orthologs for MT-TF Gene

Evolution for MT-TF Gene

ENSEMBL:
Gene Tree for MT-TF (if available)
TreeFam:
Gene Tree for MT-TF (if available)

No data available for Orthologs for MT-TF Gene

Paralogs for MT-TF Gene

No data available for Paralogs for MT-TF Gene

Variants for MT-TF Gene

Relevant External Links for MT-TF Gene

HapMap Linkage Disequilibrium report
MT-TF
Human Gene Mutation Database (HGMD)
MT-TF

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MT-TF Gene

Disorders for MT-TF Gene

MalaCards: The human disease database

(4) MalaCards diseases for MT-TF Gene - From: ClinVar, GeneTests, Orphanet, and GeneCards

Disorder Aliases PubMed IDs
melas, mt-tf-related
  • melas, mttf-related
merrf syndrome
  • myoclonus epilepsy and ragged red fibers
melas syndrome
  • mitochondrial myopathy, encephalopathy, lactic acidosis, and stroke-like episodes
mitochondrial disorders
  • mitochondrial encephalomyopathies
- elite association
Search MT-TF in MalaCards View complete list of genes associated with diseases
genes like me logo Genes that share disorders with MT-TF: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for MT-TF Gene

Publications for MT-TF Gene

  1. Severe epilepsy as the major symptom of new mutations in the mitochondrial tRNA(Phe) gene. (PMID: 20142618) Zsurka G. … Kunz W.S. (Neurology 2010) 67
  2. MtSNPscore: a combined evidence approach for assessing cumulative impact of mitochondrial variations in disease. (PMID: 19758471) Bhardwaj A. … Tiwari S. (BMC Bioinformatics 2009) 67
  3. A novel mutation in the mitochondrial tRNA(Phe) gene associated with mitochondrial myopathy. (PMID: 14659412) Moslemi A.R. … Oldfors A. (Neuromuscul. Disord. 2004) 67
  4. Mitochondrial Disorders Overview (PMID: 20301403) Pagon R.A. … Stephens K. ( 1993) 67
  5. MELAS (PMID: 20301411) Pagon R.A. … Stephens K. ( 1993) 67

Products for MT-TF Gene

Sources for MT-TF Gene

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