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Aliases for MST1P2 Gene

Aliases for MST1P2 Gene

  • Macrophage Stimulating 1 Pseudogene 2 2 3 5
  • Macrophage Stimulating 1 (Hepatocyte Growth Factor-Like) Pseudogene 2 2 3
  • Macrophage Stimulating, Pseudogene 2 2 3
  • Macrophage Stimulating, Pseudogene 1 3
  • Macrophage Stimulating, Pseudogene 3 3
  • MSPL-1 3
  • MSPL-2 3
  • MSPL-3 3
  • MSPL1 3
  • MSPL2 3
  • MSPL3 3
  • MSTP1 3
  • MSTP3 3
  • MSTP2 3

External Ids for MST1P2 Gene

Previous HGNC Symbols for MST1P2 Gene

  • MSTP2

Previous GeneCards Identifiers for MST1P2 Gene

  • GC01P016972

Summaries for MST1P2 Gene

GeneCards Summary for MST1P2 Gene

MST1P2 (Macrophage Stimulating 1 Pseudogene 2) is a Pseudogene.

Additional gene information for MST1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MST1P2 Gene

Genomics for MST1P2 Gene

GeneHancer (GH) Regulatory Elements for MST1P2 Gene

Promoters and enhancers for MST1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I016642 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 550.8 -0.9 -916 3.5 CLOCK MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZNF610 GC01P016642 ENSG00000283773 MST1P2 CROCC CROCCP3 LINC01772 NBPF1 CROCCP2
GH01I016513 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 7.6 -131.6 -131551 2.2 HDGF PKNOX1 SMAD1 ARNT FEZF1 ZNF2 ZNF121 ZNF213 KLF7 KLF13 RNU1-1 ENSG00000261135 CROCCP3 CROCC SPEN ENSG00000237938 LINC01772 NBPF1 ZBTB17 RPL22P3
GH01I016921 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 5.2 +276.3 276339 1.8 HDAC1 HDGF KLF17 SIN3A ETS1 ZNF335 GLIS2 ZNF366 SCRT2 ZNF143 CROCC EIF1AXP1 RPL22P3 MFAP2 SDHB FBXO42 LOC105376805 RCC2 MST1P2 GC01M016886
GH01I016763 Enhancer 1.3 Ensembl ENCODE dbSUPER 7.1 +120.2 120231 3.7 ARID4B DMAP1 YY1 NCOA1 MXD4 REST KAT8 NFIL3 MIER3 RCOR2 MST1P2 CROCCP3 NBPF1 MST1L GC01P016756 CROCC
GH01I016696 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 5.4 +52.2 52231 2.7 HDGF FOXA2 ATF1 ARID4B ZBTB7B ZNF48 YY1 SLC30A9 ATF7 RXRA CROCCP3 LINC01772 MST1P2 LOC105376805 LINC01783 ENSG00000279151 ENSG00000280114 ESPNP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MST1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MST1P2 Gene

Genomic Locations for MST1P2 Gene
chr1:16,645,574-16,650,420
(GRCh38/hg38)
Size:
4,847 bases
Orientation:
Plus strand
chr1:16,972,069-16,976,915
(GRCh37/hg19)

Genomic View for MST1P2 Gene

Genes around MST1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MST1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MST1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MST1P2 Gene

Proteins for MST1P2 Gene

Post-translational modifications for MST1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MST1P2 Gene

Domains & Families for MST1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MST1P2 Gene

Function for MST1P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MST1P2 Gene

Localization for MST1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MST1P2 Gene

Pathways & Interactions for MST1P2 Gene

SuperPathways for MST1P2 Gene

No Data Available

Interacting Proteins for MST1P2 Gene

Gene Ontology (GO) - Biological Process for MST1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MST1P2 Gene

Drugs & Compounds for MST1P2 Gene

No Compound Related Data Available

Transcripts for MST1P2 Gene

mRNA/cDNA for MST1P2 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MST1P2 Gene

No ASD Table

Relevant External Links for MST1P2 Gene

GeneLoc Exon Structure for
MST1P2
ECgene alternative splicing isoforms for
MST1P2

Expression for MST1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MST1P2 Gene

mRNA differential expression in normal tissues according to GTEx for MST1P2 Gene

This gene is overexpressed in Liver (x32.8).

NURSA nuclear receptor signaling pathways regulating expression of MST1P2 Gene:

MST1P2
genes like me logo Genes that share expression patterns with MST1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MST1P2 Gene

Orthologs for MST1P2 Gene

Evolution for MST1P2 Gene

ENSEMBL:
Gene Tree for MST1P2 (if available)
TreeFam:
Gene Tree for MST1P2 (if available)

No data available for Orthologs for MST1P2 Gene

Paralogs for MST1P2 Gene

No data available for Paralogs for MST1P2 Gene

Variants for MST1P2 Gene

Sequence variations from dbSNP and Humsavar for MST1P2 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1010873979 -- 16,646,290(+) C/T intron_variant
rs10157241 -- 16,649,978(+) G/A intron_variant
rs1020980071 -- 16,646,356(+) A/C intron_variant
rs1035227244 -- 16,649,742(+) T/C intron_variant
rs1057292 -- 16,649,658(+) A/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MST1P2 Gene

Variant ID Type Subtype PubMed ID
dgv10e201 CNV deletion 23290073
dgv1e203 CNV gain+loss 21179565
dgv20n67 CNV gain 20364138
dgv21e199 CNV deletion 23128226
dgv21n67 CNV gain 20364138
dgv39n100 CNV gain 25217958
dgv40n100 CNV gain 25217958
dgv41n100 CNV gain 25217958
dgv42n100 CNV loss 25217958
dgv44n100 CNV gain+loss 25217958
dgv45n100 CNV gain 25217958
dgv48n100 CNV gain+loss 25217958
dgv49e59 CNV duplication 20981092
dgv49n100 CNV loss 25217958
dgv49n106 CNV duplication 24896259
dgv50n100 CNV gain 25217958
dgv51n100 CNV loss 25217958
dgv52n100 CNV gain+loss 25217958
dgv53n100 CNV loss 25217958
dgv54n100 CNV gain 25217958
dgv55n100 CNV gain+loss 25217958
dgv58n100 CNV gain+loss 25217958
dgv59n100 CNV gain 25217958
dgv60n100 CNV loss 25217958
dgv61n100 CNV gain+loss 25217958
dgv62n100 CNV gain 25217958
dgv63n100 CNV gain 25217958
dgv65n100 CNV gain 25217958
dgv66n100 CNV gain 25217958
dgv67n100 CNV gain+loss 25217958
dgv68n100 CNV gain 25217958
dgv70n100 CNV gain+loss 25217958
dgv71n100 CNV loss 25217958
dgv72n100 CNV gain+loss 25217958
dgv73n100 CNV gain 25217958
dgv74n100 CNV gain 25217958
dgv75n100 CNV gain 25217958
dgv76n100 CNV gain 25217958
dgv77n100 CNV loss 25217958
esv2750816 CNV gain 17911159
esv2758925 CNV gain+loss 17122850
esv29642 CNV gain+loss 19812545
esv29948 CNV loss 18421352
esv33046 CNV loss 17666407
esv3444386 CNV duplication 20981092
esv34697 CNV gain 17911159
esv3577752 CNV loss 25503493
nsv1003019 CNV loss 25217958
nsv1003602 CNV loss 25217958
nsv1004433 CNV gain+loss 25217958
nsv1004807 CNV gain+loss 25217958
nsv1008129 CNV gain+loss 25217958
nsv1077283 CNV duplication 25765185
nsv1116446 OTHER inversion 24896259
nsv1152149 CNV duplication 26484159
nsv1161242 CNV duplication 26073780
nsv1161255 CNV duplication 26073780
nsv428421 CNV gain+loss 18775914
nsv436652 OTHER inversion 17901297
nsv469795 CNV gain+loss 16826518
nsv471655 CNV gain+loss 15918152
nsv499577 OTHER inversion 21111241
nsv7173 OTHER inversion 18451855
nsv821511 CNV duplication 20802225
nsv829625 CNV gain 20364138
nsv834247 CNV gain+loss 17160897
nsv9324 CNV gain+loss 18304495
nsv954848 CNV duplication 24416366
nsv999755 CNV gain 25217958

Additional Variant Information for MST1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MST1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MST1P2 Gene

Disorders for MST1P2 Gene

Additional Disease Information for MST1P2

No disorders were found for MST1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MST1P2 Gene

Publications for MST1P2 Gene

  1. Multiple MSP pseudogenes in a local repeat cluster on 1p36.2: An expanding genomic graveyard? (PMID: 10585770) van der Drift P … Versteeg R (Genomics 1999) 2 3 58

Products for MST1P2 Gene

Sources for MST1P2 Gene

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