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Aliases for MSS51 Gene

Aliases for MSS51 Gene

  • MSS51 Mitochondrial Translational Activator 2 3
  • ZMYND17 3 4 6
  • Zinc Finger MYND Domain-Containing Protein 17 3 4
  • Zinc Finger, MYND-Type Containing 17 2 3
  • MSS51 Mitochondrial Translational Activator Homolog (S. Cerevisiae) 2
  • MSS51 Mitochondrial Translational Activator Homolog 3
  • Putative Protein MSS51 Homolog, Mitochondrial 3
  • Zinc Finger, MYND Domain Containing 17 3

External Ids for MSS51 Gene

Previous HGNC Symbols for MSS51 Gene

  • ZMYND17

Previous GeneCards Identifiers for MSS51 Gene

  • GC10M075184

Summaries for MSS51 Gene

GeneCards Summary for MSS51 Gene

MSS51 (MSS51 Mitochondrial Translational Activator) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MSS51 Gene

Genomics for MSS51 Gene

Genomic Location for MSS51 Gene

Start:
73,423,579 bp from pter
End:
73,433,561 bp from pter
Size:
9,983 bases
Orientation:
Minus strand

Genomic View for MSS51 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MSS51 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MSS51 Gene

No data available for Regulatory Elements for MSS51 Gene

Proteins for MSS51 Gene

  • Protein details for MSS51 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q4VC12-MSS51_HUMAN
    Recommended name:
    Putative protein MSS51 homolog, mitochondrial
    Protein Accession:
    Q4VC12
    Secondary Accessions:
    • A6NGH6
    • Q2VP95
    • Q5F2H5
    • Q7Z3M9
    • Q8N8G0

    Protein attributes for MSS51 Gene

    Size:
    460 amino acids
    Molecular mass:
    51289 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for MSS51 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MSS51 Gene

Proteomics data for MSS51 Gene at MOPED

Post-translational modifications for MSS51 Gene

No Post-translational modifications

Other Protein References for MSS51 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for MSS51 Gene

Domains for MSS51 Gene

Gene Families for MSS51 Gene

HGNC:
  • ZMYND :Zinc fingers, MYND-type

Protein Domains for MSS51 Gene

InterPro:
Blocks:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q4VC12

UniProtKB/Swiss-Prot:

MSS51_HUMAN :
  • Q4VC12
Similarity:
  • Contains 1 MYND-type zinc finger.
genes like me logo Genes that share domains with MSS51: view

No data available for Suggested Antigen Peptide Sequences for MSS51 Gene

Function for MSS51 Gene

Gene Ontology (GO) - Molecular Function for MSS51 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with MSS51: view

Animal Model Products

CRISPR Products

miRNA for MSS51 Gene

miRTarBase miRNAs that target MSS51

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MSS51

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for MSS51 Gene

Localization for MSS51 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MSS51 Gene

Pathways for MSS51 Gene

SuperPathways for MSS51 Gene

No Data Available

Interacting Proteins for MSS51 Gene

Gene Ontology (GO) - Biological Process for MSS51 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035176 social behavior IEP 21531385
genes like me logo Genes that share ontologies with MSS51: view

No data available for Pathways by source for MSS51 Gene

Transcripts for MSS51 Gene

mRNA/cDNA for MSS51 Gene

(18) Selected AceView cDNA sequences:
(5) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MSS51 Gene

MSS51 mitochondrial translational activator:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MSS51

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for MSS51
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MSS51 Gene

No ASD Table

Relevant External Links for MSS51 Gene

GeneLoc Exon Structure for
MSS51
ECgene alternative splicing isoforms for
MSS51

Expression for MSS51 Gene

mRNA expression in normal human tissues for MSS51 Gene

mRNA differential expression in normal tissues according to GTEx for MSS51 Gene

This gene is overexpressed in Muscle - Skeletal (18.4).

SOURCE GeneReport for Unigene cluster for MSS51 Gene Hs.631823

genes like me logo Genes that share expressions with MSS51: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for MSS51 Gene

Orthologs for MSS51 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MSS51 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MSS51 36
  • 99 (a)
OneToOne
ZMYND17 35
  • 99.2 (n)
  • 98.91 (a)
cow
(Bos Taurus)
Mammalia MSS51 36
  • 84 (a)
OneToOne
ZMYND17 35
  • 87.67 (n)
  • 84.9 (a)
dog
(Canis familiaris)
Mammalia MSS51 35
  • 88.26 (n)
  • 85.43 (a)
MSS51 36
  • 78 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mss51 35
  • 84.35 (n)
  • 79.68 (a)
Mss51 16
Mss51 36
  • 79 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MSS51 36
  • 56 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Mss51 35
  • 81.65 (n)
  • 76.97 (a)
chicken
(Gallus gallus)
Aves MSS51 35
  • 61.37 (n)
  • 58.31 (a)
MSS51 36
  • 55 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia MSS51 36
  • 52 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100496751 35
  • 57.39 (n)
  • 51.13 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC100330275 35
  • 55.26 (n)
  • 48.9 (a)
mss51 36
  • 48 (a)
OneToOne
Species with no ortholog for MSS51:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MSS51 Gene

ENSEMBL:
Gene Tree for MSS51 (if available)
TreeFam:
Gene Tree for MSS51 (if available)

Paralogs for MSS51 Gene

Selected SIMAP similar genes for MSS51 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with MSS51: view

No data available for Paralogs for MSS51 Gene

Variants for MSS51 Gene

Sequence variations from dbSNP and Humsavar for MSS51 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs1332178 -- 73,429,828(+) TCTTG(C/T)AGGGA intron-variant
rs2297452 -- 73,426,854(+) AATGA(C/G)AGCTG intron-variant
rs3209644 -- 73,423,976(-) CTTTT(C/T)TTTGT utr-variant-3-prime
rs7900236 -- 73,433,371(+) GAAAA(C/G)AGAAG intron-variant
rs7901375 -- 73,428,546(+) ggagt(A/G)cagca intron-variant

Relevant External Links for MSS51 Gene

HapMap Linkage Disequilibrium report
MSS51

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MSS51 Gene

Disorders for MSS51 Gene

No disorders were found for MSS51 Gene.

No data available for UniProtKB/Swiss-Prot for MSS51 Gene

Publications for MSS51 Gene

  1. Dual functions of Mss51 couple synthesis of Cox1 to assembly of cytochrome c oxidase in Saccharomyces cerevisiae mitochondria. (PMID: 19710419) Perez-Martinez X. … Fox T.D. (Mol. Biol. Cell 2009) 2 3
  2. ANXA7, PPP3CB, DNAJC9, and ZMYND17 genes at chromosome 10q22 associated with the subgroup of schizophrenia with deficits in attention and executive function. (PMID: 21531385) Liu C.M. … Hwu H.G. (Biol. Psychiatry 2011) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  4. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for MSS51 Gene

Sources for MSS51 Gene

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