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Aliases for MSL3P1 Gene

Aliases for MSL3P1 Gene

  • Male-Specific Lethal 3 Homolog (Drosophila) Pseudogene 1 2 3
  • Male-Specific Lethal-3 Homolog 2 3 4
  • MSL3-Like 2 3 4
  • MSL3L2 3 4
  • Putative Male-Specific Lethal-3 Protein-Like 2 3
  • Male-Specific Lethal-3 Homolog Pseudogene 1 4
  • Male-Specific Lethal 3-Like 2 (Drosophila) 2
  • Male-Specific Lethal 3 Homolog Pseudogene 3
  • Male-Specific Lethal 3-Like 2 3

External Ids for MSL3P1 Gene

Previous HGNC Symbols for MSL3P1 Gene

  • MSL3L2

Previous GeneCards Identifiers for MSL3P1 Gene

  • GC02M234776

Summaries for MSL3P1 Gene

GeneCards Summary for MSL3P1 Gene

MSL3P1 (Male-Specific Lethal 3 Homolog (Drosophila) Pseudogene 1) is a Pseudogene.

UniProtKB/Swiss-Prot for MSL3P1 Gene

  • May be involved in chromatin remodeling and transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MSL3P1 Gene

Genomics for MSL3P1 Gene

Genomic Location for MSL3P1 Gene

Start:
233,865,437 bp from pter
End:
233,868,444 bp from pter
Size:
3,008 bases
Orientation:
Minus strand

Genomic View for MSL3P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MSL3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MSL3P1 Gene

No data available for Regulatory Elements for MSL3P1 Gene

Proteins for MSL3P1 Gene

  • Protein details for MSL3P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C860-MS3L2_HUMAN
    Recommended name:
    Putative male-specific lethal-3 protein-like 2
    Protein Accession:
    P0C860
    Secondary Accessions:

    Protein attributes for MSL3P1 Gene

    Size:
    447 amino acids
    Molecular mass:
    51070 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MSL3P1 Gene

Proteomics data for MSL3P1 Gene at MOPED

Post-translational modifications for MSL3P1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for MSL3P1 Gene

Domains for MSL3P1 Gene

Protein Domains for MSL3P1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for MSL3P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0C860

UniProtKB/Swiss-Prot:

MS3L2_HUMAN :
  • P0C860
Domain:
  • Contains 1 chromo domain.
  • Contains 1 MRG domain.
genes like me logo Genes that share domains with MSL3P1: view

No data available for Gene Families for MSL3P1 Gene

Function for MSL3P1 Gene

Molecular function for MSL3P1 Gene

UniProtKB/Swiss-Prot Function:
May be involved in chromatin remodeling and transcriptional regulation.

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MSL3P1

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MSL3P1 Gene

Localization for MSL3P1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MSL3P1 Gene

Gene Ontology (GO) - Cellular Components for MSL3P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with MSL3P1: view

No data available for Subcellular locations from COMPARTMENTS for MSL3P1 Gene

Pathways for MSL3P1 Gene

SuperPathways for MSL3P1 Gene

No Data Available

Interacting Proteins for MSL3P1 Gene

Gene Ontology (GO) - Biological Process for MSL3P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0016568 chromatin modification IEA --
genes like me logo Genes that share ontologies with MSL3P1: view

No data available for Pathways by source for MSL3P1 Gene

Transcripts for MSL3P1 Gene

mRNA/cDNA for MSL3P1 Gene

Unigene Clusters for MSL3P1 Gene

Male-specific lethal 3 homolog (Drosophila) pseudogene 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MSL3P1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MSL3P1 Gene

No ASD Table

Relevant External Links for MSL3P1 Gene

GeneLoc Exon Structure for
MSL3P1
ECgene alternative splicing isoforms for
MSL3P1

Expression for MSL3P1 Gene

mRNA expression in normal human tissues for MSL3P1 Gene

mRNA differential expression in normal tissues according to GTEx for MSL3P1 Gene

This gene is overexpressed in Testis (12.3).

Protein differential expression in normal tissues for MSL3P1 Gene

This gene is overexpressed in Adipocyte (39.4) and Pancreas (29.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for MSL3P1 Gene

SOURCE GeneReport for Unigene cluster for MSL3P1 Gene Hs.355809

genes like me logo Genes that share expressions with MSL3P1: view

Expression partners for MSL3P1 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for MSL3P1 Gene

Orthologs for MSL3P1 Gene

Evolution for MSL3P1 Gene

ENSEMBL:
Gene Tree for MSL3P1 (if available)
TreeFam:
Gene Tree for MSL3P1 (if available)

No data available for Orthologs for MSL3P1 Gene

Paralogs for MSL3P1 Gene

Selected SIMAP similar genes for MSL3P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with MSL3P1: view

No data available for Paralogs for MSL3P1 Gene

Variants for MSL3P1 Gene

Sequence variations from dbSNP and Humsavar for MSL3P1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs169922 -- 233,869,604(-) agttt(C/T)tgtaa upstream-variant-2KB
rs183331 -- 233,865,503(-) TGTTA(A/C/G/T)GGTTC nc-transcript-variant
rs186159 -- 233,865,230(-) ACCCA(C/G)ATATT downstream-variant-500B
rs188492 -- 233,865,430(-) TAACT(C/T)GGAGT downstream-variant-500B
rs213543 -- 233,865,379(-) GCTAC(A/G)TATTC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MSL3P1 Gene

Variant ID Type Subtype PubMed ID
nsv3216 CNV Insertion 18451855

Relevant External Links for MSL3P1 Gene

HapMap Linkage Disequilibrium report
MSL3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MSL3P1 Gene

Disorders for MSL3P1 Gene

No disorders were found for MSL3P1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MSL3P1 Gene

Publications for MSL3P1 Gene

  1. A human protein complex homologous to the Drosophila MSL complex is responsible for the majority of histone H4 acetylation at lysine 16. (PMID: 16227571) Smith E.R. … Lucchesi J.C. (Mol. Cell. Biol. 2005) 3
  2. MOF and histone H4 acetylation at lysine 16 are critical for DNA damage response and double-strand break repair. (PMID: 20479123) Sharma G.G. … Pandita T.K. (Mol. Cell. Biol. 2010) 3
  3. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 4

Products for MSL3P1 Gene

Sources for MSL3P1 Gene

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