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Aliases for MRVI1-AS1 Gene

Subcategory (RNA class) for MRVI1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MRVI1-AS1 Gene

  • MRVI1 Antisense RNA 1 2 3 5
  • MRVI1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MRVI1-AS1 Gene

Summaries for MRVI1-AS1 Gene

GeneCards Summary for MRVI1-AS1 Gene

MRVI1-AS1 (MRVI1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRVI1-AS1 Gene

Genomics for MRVI1-AS1 Gene

Regulatory Elements for MRVI1-AS1 Gene

Enhancers for MRVI1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G010588 1.7 FANTOM5 Ensembl ENCODE dbSUPER 30.2 +50.8 50783 7.3 HDAC1 PKNOX1 ATF1 TBL1XR1 ARNT TCF12 GATA2 FOS ETV6 SMARCA5 MRVI1-AS1 RNF141 MRVI1 AMPD3 LYVE1 GC11M010566
GH11G010539 1.1 ENCODE 35.1 -0.2 -200 2.5 HDGF HNRNPUL1 PKNOX1 AGO1 ARID4B SIN3A YY1 ZNF207 ZNF143 FOS MRVI1-AS1 RNF141 GC11M010568 GC11M010563
GH11G010525 1.6 FANTOM5 Ensembl ENCODE dbSUPER 22.7 -13.2 -13165 4.8 PKNOX1 FOXA2 TBL1XR1 FOSL1 ZNF766 GATA2 CBX5 EED ETV6 FOS MRVI1-AS1 MRVI1 LYVE1 RNF141 AMPD3 GC11M010563 GC11M010568
GH11G010586 1.2 Ensembl ENCODE dbSUPER 22.5 +45.6 45588 2.2 PKNOX1 FOXA2 ZNF792 ZMYM3 FOSL1 GATA2 FOS NFE2 SMARCE1 L3MBTL2 MRVI1-AS1 LYVE1 RNF141 MRVI1 CTR9 GC11M010566
GH11G010598 1.5 Ensembl ENCODE dbSUPER 17.4 +63.8 63799 12.2 PKNOX1 FOXA2 ZFP64 ARID4B ZNF766 GATA2 FOS SP5 MXD4 REST MRVI1-AS1 MRVI1 CTR9 RNF141 LYVE1 GC11M010566
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRVI1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for MRVI1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000036760 -436 1601 HDGF HNRNPUL1 AGO1 ARID4B SIN3A FEZF1 YY1 ZNF207 ZNF143 KLF13

Genomic Location for MRVI1-AS1 Gene

Chromosome:
11
Start:
10,541,236 bp from pter
End:
10,599,932 bp from pter
Size:
58,697 bases
Orientation:
Plus strand

Genomic View for MRVI1-AS1 Gene

Genes around MRVI1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRVI1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRVI1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRVI1-AS1 Gene

Proteins for MRVI1-AS1 Gene

Post-translational modifications for MRVI1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRVI1-AS1 Gene

Domains & Families for MRVI1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRVI1-AS1 Gene

Function for MRVI1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRVI1-AS1 Gene

Localization for MRVI1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRVI1-AS1 Gene

Pathways & Interactions for MRVI1-AS1 Gene

SuperPathways for MRVI1-AS1 Gene

No Data Available

Interacting Proteins for MRVI1-AS1 Gene

Gene Ontology (GO) - Biological Process for MRVI1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRVI1-AS1 Gene

Drugs & Compounds for MRVI1-AS1 Gene

No Compound Related Data Available

Transcripts for MRVI1-AS1 Gene

mRNA/cDNA for MRVI1-AS1 Gene

(5) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRVI1-AS1 Gene

MRVI1 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRVI1-AS1 Gene

No ASD Table

Relevant External Links for MRVI1-AS1 Gene

GeneLoc Exon Structure for
MRVI1-AS1
ECgene alternative splicing isoforms for
MRVI1-AS1

Expression for MRVI1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRVI1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MRVI1-AS1 Gene

This gene is overexpressed in Testis (x26.2).

SOURCE GeneReport for Unigene cluster for MRVI1-AS1 Gene:

Hs.246769
genes like me logo Genes that share expression patterns with MRVI1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRVI1-AS1 Gene

Orthologs for MRVI1-AS1 Gene

Evolution for MRVI1-AS1 Gene

ENSEMBL:
Gene Tree for MRVI1-AS1 (if available)
TreeFam:
Gene Tree for MRVI1-AS1 (if available)

No data available for Orthologs for MRVI1-AS1 Gene

Paralogs for MRVI1-AS1 Gene

No data available for Paralogs for MRVI1-AS1 Gene

Variants for MRVI1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MRVI1-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000007875 -- 10,568,554(+) GAGCC(A/C)GGGAA intron-variant, utr-variant-5-prime
rs1000040027 -- 10,595,051(+) TCCCA(A/G)GTAGC intron-variant
rs1000054149 -- 10,552,095(+) GAGAT(A/G)CAACT intron-variant
rs1000118203 -- 10,545,850(+) GCACT(A/G)TAGCT intron-variant
rs1000119272 -- 10,572,873(+) AATCA(C/T)AGACC intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MRVI1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3579367 CNV loss 25503493
nsv1044011 CNV gain 25217958
nsv1137988 CNV deletion 24896259
nsv7675 CNV insertion 18451855
nsv819020 CNV loss 19587683
nsv832063 CNV loss 17160897

Relevant External Links for MRVI1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRVI1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRVI1-AS1 Gene

Disorders for MRVI1-AS1 Gene

Relevant External Links for MRVI1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MRVI1-AS1

No disorders were found for MRVI1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRVI1-AS1 Gene

Publications for MRVI1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MRVI1-AS1 Gene

Sources for MRVI1-AS1 Gene

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