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MRPS36P4 Gene(Pseudogene)

Mitochondrial Ribosomal Protein S36 Pseudogene 4

GCID:
GC11P112208
GIFtS:
11
Genes Participants
UDN Logo

Aliases for MRPS36P4 Gene

Subcategory (RNA class) for MRPS36P4 Gene

lncRNA

Aliases for MRPS36P4 Gene

  • Mitochondrial Ribosomal Protein S36 Pseudogene 4 2 3 5

External Ids for MRPS36P4 Gene

ORGUL Members for MRPS36P4 Gene

Previous GeneCards Identifiers for MRPS36P4 Gene

  • GC11U900012
  • GC11P111616
  • GC11P111584
  • GC11P112079

Summaries for MRPS36P4 Gene

GeneCards Summary for MRPS36P4 Gene

MRPS36P4 (Mitochondrial Ribosomal Protein S36 Pseudogene 4) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for MRPS36P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPS36P4 Gene

Genomics for MRPS36P4 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for MRPS36P4 Gene

Promoters and enhancers for MRPS36P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11I112213 Enhancer 0.8 ENCODE 0.4 +5.4 5426 0.1 FOXA2 RARA RFX5 YY1 RCOR1 HMG20B RXRA CEBPB NFIL3 CEBPA RPS12P21 MRPS36P4 BCO2
GH11I112216 Enhancer 0.7 ENCODE 0.4 +8.0 8036 0.2 FOXA2 RXRA MAX CEBPB REST EP300 RAD21 FOXA1 NR2F2 GABPA RPS12P21 GC11P112220 RNU6-44P MRPS36P4 BCO2
GH11I112195 Enhancer 0.6 ENCODE 0.4 -12.5 -12490 0.8 KLF1 CEBPB KLF4 EP300 RAD21 BRCA1 RFX5 MAFF ZNF512 STAT3 BCO2 ENSG00000254638 ENSG00000255292 TEX12 SDHD TIMM8B RNU6-44P MRPS36P4 KCTD9P4
GH11I112212 Enhancer 0.2 ENCODE 0.8 +4.0 3985 0.8 BCO2 MRPS36P4 RPS12P21
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MRPS36P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MRPS36P4 Gene

Genomic Locations for MRPS36P4 Gene
chr11:112,208,597-112,208,898
(GRCh38/hg38)
Size:
302 bases
Orientation:
Plus strand
chr11:112,079,320-112,079,621
(GRCh37/hg19)

Genomic View for MRPS36P4 Gene

Genes around MRPS36P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPS36P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPS36P4 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MRPS36P4 Gene

Proteins for MRPS36P4 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MRPS36P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPS36P4 Gene

Domains & Families for MRPS36P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPS36P4 Gene

Function for MRPS36P4 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes for MRPS36P4 Gene

GenomeRNAi human phenotypes for MRPS36P4:
genes like me logo Genes that share phenotypes with MRPS36P4: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPS36P4 Gene

Localization for MRPS36P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPS36P4 Gene

Pathways & Interactions for MRPS36P4 Gene

SuperPathways for MRPS36P4 Gene

PathCards logo More details on SuperPathways for MRPS36P4
No Data Available

Interacting Proteins for MRPS36P4 Gene

Gene Ontology (GO) - Biological Process for MRPS36P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPS36P4 Gene

Drugs & Compounds for MRPS36P4 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MRPS36P4 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for MRPS36P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRPS36P4 Gene

No ASD Table

Relevant External Links for MRPS36P4 Gene

GeneLoc Exon Structure for
MRPS36P4
ECgene alternative splicing isoforms for
MRPS36P4

Expression for MRPS36P4 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRPS36P4 Gene

mRNA expression in normal human tissues for MRPS36P4 Gene
mRNA expression by GTEx for MRPS36P4 Gene

mRNA differential expression in normal tissues according to GTEx for MRPS36P4 Gene

This gene is overexpressed in Heart - Atrial Appendage (x8.5), Heart - Left Ventricle (x8.3), and Liver (x5.6).

NURSA nuclear receptor signaling pathways regulating expression of MRPS36P4 Gene:

MRPS36P4
genes like me logo Genes that share expression patterns with MRPS36P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPS36P4 Gene

Orthologs for MRPS36P4 Gene

Evolution for MRPS36P4 Gene

ENSEMBL:
Gene Tree for MRPS36P4 (if available)
TreeFam:
Gene Tree for MRPS36P4 (if available)

No data available for Orthologs for MRPS36P4 Gene

Paralogs for MRPS36P4 Gene

No data available for Paralogs for MRPS36P4 Gene

Variants for MRPS36P4 Gene

Additional Variant Information for MRPS36P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPS36P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPS36P4 Gene

Disorders for MRPS36P4 Gene

No disorders were found for MRPS36P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MRPS36P4 Gene

Publications for MRPS36P4 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z … Gerstein M (Genomics 2003) 2 3 58
  2. A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene. (PMID: 19490893) Luo J … Elledge SJ (Cell 2009) 3 58

Products for MRPS36P4 Gene

Sources for MRPS36P4 Gene

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