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Aliases for MRPS31P5 Gene

Aliases for MRPS31P5 Gene

  • Mitochondrial Ribosomal Protein S31 Pseudogene 5 2 3 5
  • Mitochondrial Ribosomal Protein S31 Pseudogene 3 2 3
  • MRPS31P3 3

External Ids for MRPS31P5 Gene

Previous HGNC Symbols for MRPS31P5 Gene

  • MRPS31P3

Previous GeneCards Identifiers for MRPS31P5 Gene

  • GC13M052745
  • GC13M052172
  • GC13M052176
  • GC13M052178
  • GC13M052180

Summaries for MRPS31P5 Gene

GeneCards Summary for MRPS31P5 Gene

MRPS31P5 (Mitochondrial Ribosomal Protein S31 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPS31P5 Gene

Genomics for MRPS31P5 Gene

Regulatory Elements for MRPS31P5 Gene

Enhancers for MRPS31P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F051522 1.3 Ensembl ENCODE 11.1 +669.9 669917 3.7 PKNOX1 ATF1 MLX ARID4B DMAP1 YY1 GTF3C2 SLC30A9 FOS PPARG ALG11 UTP14C SERPINE3 RPS4XP16 MRPS31P5 RNASEH2B-AS1 WDFY2 MIR4703 SNRPGP11
GH13F052193 1.5 FANTOM5 ENCODE 0.8 -0.1 -132 2.6 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ALG11 CKAP2 UTP14C TPTE2P2 RPS4XP16 SERPINE3 ATP7B MRPS31P5 PIR51896
GH13F052186 1.1 Ensembl ENCODE 0.4 +6.4 6431 2.3 HDAC1 PKNOX1 ARID4B BMI1 GATA2 CREM USF2 ZEB2 REST TBX21 NEK3 NEK5 CCDC70 ALG11 VPS36 ATP7B DHRS12 ENSG00000231856 ENSG00000244471 MRPS31P5
GH13F052201 1 Ensembl ENCODE 0.4 -7.3 -7277 0.5 GATAD2A ELF3 CTCF ZNF654 SAP130 TEAD1 ARID4B MXD4 MNT RAD21 TPTE2P2 MRPS31P5 PIR51896
GH13F052203 1 Ensembl ENCODE 0.4 -9.8 -9834 1.4 GATAD2A CEBPB ARID1B IRF9 ZFP69B ZNF318 JUND GATA3 ATF3 SMARCA4 TPTE2P2 ATP7B MRPS31P5 PIR51896
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPS31P5 on UCSC Golden Path with GeneCards custom track

Promoters for MRPS31P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000516460 -133 3200 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2

Genomic Location for MRPS31P5 Gene

Chromosome:
13
Start:
52,167,709 bp from pter
End:
52,194,467 bp from pter
Size:
26,759 bases
Orientation:
Minus strand

Genomic View for MRPS31P5 Gene

Genes around MRPS31P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPS31P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPS31P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPS31P5 Gene

Proteins for MRPS31P5 Gene

Post-translational modifications for MRPS31P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPS31P5 Gene

Domains & Families for MRPS31P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPS31P5 Gene

Function for MRPS31P5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPS31P5 Gene

Localization for MRPS31P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRPS31P5 Gene

Pathways & Interactions for MRPS31P5 Gene

SuperPathways for MRPS31P5 Gene

No Data Available

Interacting Proteins for MRPS31P5 Gene

Gene Ontology (GO) - Biological Process for MRPS31P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPS31P5 Gene

Transcripts for MRPS31P5 Gene

mRNA/cDNA for MRPS31P5 Gene

(9) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRPS31P5 Gene

Mitochondrial ribosomal protein S31 pseudogene 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MRPS31P5 Gene

No ASD Table

Relevant External Links for MRPS31P5 Gene

GeneLoc Exon Structure for
MRPS31P5
ECgene alternative splicing isoforms for
MRPS31P5

Expression for MRPS31P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRPS31P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPS31P5 Gene:

MRPS31P5

SOURCE GeneReport for Unigene cluster for MRPS31P5 Gene:

Hs.553878
genes like me logo Genes that share expression patterns with MRPS31P5: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MRPS31P5 Gene

Orthologs for MRPS31P5 Gene

Evolution for MRPS31P5 Gene

ENSEMBL:
Gene Tree for MRPS31P5 (if available)
TreeFam:
Gene Tree for MRPS31P5 (if available)

No data available for Orthologs for MRPS31P5 Gene

Paralogs for MRPS31P5 Gene

No data available for Paralogs for MRPS31P5 Gene

Variants for MRPS31P5 Gene

Sequence variations from dbSNP and Humsavar for MRPS31P5 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1052710 -- 52,168,180(-) TCCCA(C/T)ATCCC nc-transcript-variant
rs1052719 -- 52,167,932(-) AGCTT(A/T)ACACA nc-transcript-variant
rs1052733 -- 52,167,760(-) ATTCA(A/G)TTTTT nc-transcript-variant
rs1052737 -- 52,167,742(-) TATTA(C/G)TAATA nc-transcript-variant
rs10708326 -- 52,196,184(+) AAAAA(-/A)TAGTG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MRPS31P5 Gene

Variant ID Type Subtype PubMed ID
nsv1037567 CNV gain 25217958
nsv428288 CNV loss 18775914
nsv976116 CNV duplication 23825009

Relevant External Links for MRPS31P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPS31P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRPS31P5 Gene

Disorders for MRPS31P5 Gene

Relevant External Links for MRPS31P5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MRPS31P5

No disorders were found for MRPS31P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPS31P5 Gene

Publications for MRPS31P5 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for MRPS31P5 Gene

Sources for MRPS31P5 Gene

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