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Aliases for MRPS18CP5 Gene

Aliases for MRPS18CP5 Gene

  • Mitochondrial Ribosomal Protein S18C Pseudogene 5 2 3
  • RP11-446P9.1 5

External Ids for MRPS18CP5 Gene

Previous GeneCards Identifiers for MRPS18CP5 Gene

  • GC15U900019
  • GC15M023720
  • GC15M023724
  • GC15M026173
  • GC15M004303

Summaries for MRPS18CP5 Gene

GeneCards Summary for MRPS18CP5 Gene

MRPS18CP5 (Mitochondrial Ribosomal Protein S18C Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPS18CP5 Gene

Genomics for MRPS18CP5 Gene

Regulatory Elements for MRPS18CP5 Gene

Enhancers for MRPS18CP5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F025933 0.9 Ensembl ENCODE 0.4 -5.4 -5438 1.3 CTCF ZNF654 ZNF680 SMARCA4 ZNF143 SMC3 ZNF384 RAD21 MRPS18CP5 ENSG00000212604 GC15M026009
GH15F025931 0.3 FANTOM5 0.8 -2.5 -2504 0.1 ATP10A MRPS18CP5 ENSG00000212604 GC15M026009
GH15F025947 0.8 Ensembl ENCODE 0.3 -19.0 -18993 0.4 CTCF ZNF654 ZIC2 MAFK RAD21 MRPS18CP5 ENSG00000212604 GC15M026009
GH15F025943 0.6 FANTOM5 0.3 -15.5 -15513 0.3 ZNF316 PKNOX1 NFYA NFYB MRPS18CP5 ENSG00000212604 GC15M026009
GH15F025970 0.8 FANTOM5 ENCODE 0.2 -43.5 -43454 2.5 ZNF146 ZNF280D NFYB ENSG00000212604 GC15M026009 MRPS18CP5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPS18CP5 on UCSC Golden Path with GeneCards custom track

Genomic Location for MRPS18CP5 Gene

Chromosome:
15
Start:
25,928,046 bp from pter
End:
25,928,595 bp from pter
Size:
550 bases
Orientation:
Minus strand

Genomic View for MRPS18CP5 Gene

Genes around MRPS18CP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPS18CP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPS18CP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPS18CP5 Gene

Proteins for MRPS18CP5 Gene

Post-translational modifications for MRPS18CP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPS18CP5 Gene

Domains & Families for MRPS18CP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPS18CP5 Gene

Function for MRPS18CP5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPS18CP5 Gene

Localization for MRPS18CP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRPS18CP5 Gene

Pathways & Interactions for MRPS18CP5 Gene

SuperPathways for MRPS18CP5 Gene

No Data Available

Interacting Proteins for MRPS18CP5 Gene

Gene Ontology (GO) - Biological Process for MRPS18CP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPS18CP5 Gene

Transcripts for MRPS18CP5 Gene

mRNA/cDNA for MRPS18CP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MRPS18CP5 Gene

No ASD Table

Relevant External Links for MRPS18CP5 Gene

GeneLoc Exon Structure for
MRPS18CP5
ECgene alternative splicing isoforms for
MRPS18CP5

Expression for MRPS18CP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRPS18CP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPS18CP5 Gene:

MRPS18CP5
genes like me logo Genes that share expression patterns with MRPS18CP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MRPS18CP5 Gene

Orthologs for MRPS18CP5 Gene

Evolution for MRPS18CP5 Gene

ENSEMBL:
Gene Tree for MRPS18CP5 (if available)
TreeFam:
Gene Tree for MRPS18CP5 (if available)

No data available for Orthologs for MRPS18CP5 Gene

Paralogs for MRPS18CP5 Gene

No data available for Paralogs for MRPS18CP5 Gene

Variants for MRPS18CP5 Gene

Relevant External Links for MRPS18CP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPS18CP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPS18CP5 Gene

Disorders for MRPS18CP5 Gene

Relevant External Links for MRPS18CP5

Genetic Association Database (GAD)
MRPS18CP5

No disorders were found for MRPS18CP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPS18CP5 Gene

Publications for MRPS18CP5 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z. … Gerstein M. (Genomics 2003) 2 3 64
  2. Association of genetic variants on 15q12 with cortical thickness and cognition in schizophrenia. (PMID: 21810643) Bakken T.E. … Schork N.J. (Arch. Gen. Psychiatry 2011) 46 64
  3. Genome-wide detection of allele specific copy number variation associated with insulin resistance in African Americans from the HyperGEN study. (PMID: 21901158) Irvin M.R. … Arnett D.K. (PLoS ONE 2011) 46 64
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64

Products for MRPS18CP5 Gene

Sources for MRPS18CP5 Gene

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