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Aliases for MRPS18CP2 Gene

Aliases for MRPS18CP2 Gene

  • Mitochondrial Ribosomal Protein S18C Pseudogene 2 2 3
  • AC087763.1 5

External Ids for MRPS18CP2 Gene

Previous GeneCards Identifiers for MRPS18CP2 Gene

  • GC08M008785
  • GC08U900219
  • GC08M008828

Summaries for MRPS18CP2 Gene

GeneCards Summary for MRPS18CP2 Gene

MRPS18CP2 (Mitochondrial Ribosomal Protein S18C Pseudogene 2) is a Pseudogene.

Additional gene information for MRPS18CP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPS18CP2 Gene

Genomics for MRPS18CP2 Gene

Regulatory Elements for MRPS18CP2 Gene

Enhancers for MRPS18CP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H008935 0.9 FANTOM5 Ensembl 0.7 -1.4 -1377 0 ZFHX2 EGR1 NRF1 HMBOX1 USF2 NR2F2 EGR2 RPL10P19 CLDN23 MRPS18CP2
GH08H008941 1.1 Ensembl ENCODE 0.4 -8.3 -8314 1 ELF3 CTCF HINFP ETV1 BACH1 ZNF175 RAD21 RELA TEAD3 ZNF766 RPL10P19 ERI1 MRPS18CP2
GH08H008936 0.4 Ensembl 0.7 -2.0 -2010 0 ZNF316 RPL10P19 MRPS18CP2
GH08H008945 0.5 ENCODE 0.4 -11.8 -11828 0 PKNOX1 STAT1 RFX1 FAM86B3P MRPS18CP2 RPL10P19
GH08H008946 0.5 ENCODE 0.4 -13.0 -13040 0 SOX13 PRDM1 EGR2 MRPS18CP2 RPL10P19
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPS18CP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MRPS18CP2 Gene

Chromosome:
8
Start:
8,933,678 bp from pter
End:
8,934,091 bp from pter
Size:
414 bases
Orientation:
Minus strand

Genomic View for MRPS18CP2 Gene

Genes around MRPS18CP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPS18CP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPS18CP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPS18CP2 Gene

Proteins for MRPS18CP2 Gene

Post-translational modifications for MRPS18CP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPS18CP2 Gene

Domains & Families for MRPS18CP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPS18CP2 Gene

Function for MRPS18CP2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for MRPS18CP2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPS18CP2 Gene

Localization for MRPS18CP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPS18CP2 Gene

Pathways & Interactions for MRPS18CP2 Gene

SuperPathways for MRPS18CP2 Gene

No Data Available

Interacting Proteins for MRPS18CP2 Gene

Gene Ontology (GO) - Biological Process for MRPS18CP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPS18CP2 Gene

Drugs & Compounds for MRPS18CP2 Gene

No Compound Related Data Available

Transcripts for MRPS18CP2 Gene

mRNA/cDNA for MRPS18CP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for MRPS18CP2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MRPS18CP2 Gene

No ASD Table

Relevant External Links for MRPS18CP2 Gene

GeneLoc Exon Structure for
MRPS18CP2
ECgene alternative splicing isoforms for
MRPS18CP2

Expression for MRPS18CP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRPS18CP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPS18CP2 Gene:

MRPS18CP2
genes like me logo Genes that share expression patterns with MRPS18CP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPS18CP2 Gene

Orthologs for MRPS18CP2 Gene

Evolution for MRPS18CP2 Gene

ENSEMBL:
Gene Tree for MRPS18CP2 (if available)
TreeFam:
Gene Tree for MRPS18CP2 (if available)

No data available for Orthologs for MRPS18CP2 Gene

Paralogs for MRPS18CP2 Gene

No data available for Paralogs for MRPS18CP2 Gene

Variants for MRPS18CP2 Gene

Relevant External Links for MRPS18CP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPS18CP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPS18CP2 Gene

Disorders for MRPS18CP2 Gene

Relevant External Links for MRPS18CP2

Genetic Association Database (GAD)
MRPS18CP2
Human Genome Epidemiology (HuGE) Navigator
MRPS18CP2

No disorders were found for MRPS18CP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPS18CP2 Gene

Publications for MRPS18CP2 Gene

  1. MRPS18CP2 alleles and DEFA3 absence as putative chromosome 8p23.1 modifiers of hearing loss due to mtDNA mutation A1555G in the 12S rRNA gene. (PMID: 18154640) Ballana E … Estivill X (BMC medical genetics 2007) 3 45 60
  2. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z … Gerstein M (Genomics 2003) 2 3 60
  3. Genome-wide association for smoking cessation success: participants in the Patch in Practice trial of nicotine replacement. (PMID: 20235792) Uhl GR … Munafò MR (Pharmacogenomics 2010) 45 60

Products for MRPS18CP2 Gene

Sources for MRPS18CP2 Gene

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