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Aliases for MRPS18AP1 Gene

Aliases for MRPS18AP1 Gene

  • Mitochondrial Ribosomal Protein S18A Pseudogene 1 2 3 5

External Ids for MRPS18AP1 Gene

Previous GeneCards Identifiers for MRPS18AP1 Gene

  • GC03U900109
  • GC03M048258

Summaries for MRPS18AP1 Gene

GeneCards Summary for MRPS18AP1 Gene

MRPS18AP1 (Mitochondrial Ribosomal Protein S18A Pseudogene 1) is a Pseudogene.

Additional gene information for MRPS18AP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPS18AP1 Gene

Genomics for MRPS18AP1 Gene

GeneHancer (GH) Regulatory Elements for MRPS18AP1 Gene

Promoters and enhancers for MRPS18AP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I047379 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 35.9 +876.3 876272 3.3 CLOCK MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC PTPN23 ENSG00000260236 NME6 SETD2 MRPS18AP1 ZNF589 CCDC12 BOLA2P2 NBEAL2 SCAP
GH03I047511 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 30.7 +744.1 744107 2.7 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B ELP6 SETD2 NME6 MRPS18AP1 ZNF589 PTPN23 ATRIP CCDC12 FCF1P2 BOLA2P2
GH03I048551 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14.8 -302.3 -302309 15.4 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B PFKFB4 UCN2 TMA7 NME6 QRICH1 ATRIP USP19 ZNF589 WDR6 TMEM89
GH03I048464 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 14.8 -213.1 -213128 11.4 HDGF PKNOX1 CLOCK SMAD1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 SHISA5 TREX1 TMA7 ATRIP NME6 QRICH1 USP19 MRPS18AP1 TMEM89 RHOA-IT1
GH03I048239 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 15.1 +16.0 16037 2.8 HDGF PKNOX1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF589 GC03M048234 QRICH1 NME6 CCDC71 ATRIP PTPN23 USP19 MRPS18AP1 TMEM89
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MRPS18AP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MRPS18AP1 Gene

Genomic Locations for MRPS18AP1 Gene
chr3:48,256,040-48,256,961
(GRCh38/hg38)
Size:
922 bases
Orientation:
Minus strand
chr3:48,297,530-48,298,439
(GRCh37/hg19)

Genomic View for MRPS18AP1 Gene

Genes around MRPS18AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPS18AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPS18AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPS18AP1 Gene

Proteins for MRPS18AP1 Gene

Post-translational modifications for MRPS18AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPS18AP1 Gene

Domains & Families for MRPS18AP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPS18AP1 Gene

Function for MRPS18AP1 Gene

Phenotypes From GWAS Catalog for MRPS18AP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPS18AP1 Gene

Localization for MRPS18AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPS18AP1 Gene

Pathways & Interactions for MRPS18AP1 Gene

SuperPathways for MRPS18AP1 Gene

No Data Available

Interacting Proteins for MRPS18AP1 Gene

Gene Ontology (GO) - Biological Process for MRPS18AP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPS18AP1 Gene

Drugs & Compounds for MRPS18AP1 Gene

No Compound Related Data Available

Transcripts for MRPS18AP1 Gene

mRNA/cDNA for MRPS18AP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRPS18AP1 Gene

No ASD Table

Relevant External Links for MRPS18AP1 Gene

GeneLoc Exon Structure for
MRPS18AP1
ECgene alternative splicing isoforms for
MRPS18AP1

Expression for MRPS18AP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRPS18AP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPS18AP1 Gene:

MRPS18AP1
genes like me logo Genes that share expression patterns with MRPS18AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPS18AP1 Gene

Orthologs for MRPS18AP1 Gene

Evolution for MRPS18AP1 Gene

ENSEMBL:
Gene Tree for MRPS18AP1 (if available)
TreeFam:
Gene Tree for MRPS18AP1 (if available)

No data available for Orthologs for MRPS18AP1 Gene

Paralogs for MRPS18AP1 Gene

No data available for Paralogs for MRPS18AP1 Gene

Variants for MRPS18AP1 Gene

Additional Variant Information for MRPS18AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPS18AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPS18AP1 Gene

Disorders for MRPS18AP1 Gene

No disorders were found for MRPS18AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MRPS18AP1 Gene

Publications for MRPS18AP1 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z … Gerstein M (Genomics 2003) 2 3 58

Products for MRPS18AP1 Gene

Sources for MRPS18AP1 Gene

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