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Aliases for MRPS16P3 Gene

Subcategory (RNA class) for MRPS16P3 Gene

lncRNA

Aliases for MRPS16P3 Gene

  • Mitochondrial Ribosomal Protein S16 Pseudogene 3 2 3 5

External Ids for MRPS16P3 Gene

ORGUL Members for MRPS16P3 Gene

Previous GeneCards Identifiers for MRPS16P3 Gene

  • GC22U900006
  • GC22P034371
  • GC22P034424
  • GC22P036100

Summaries for MRPS16P3 Gene

GeneCards Summary for MRPS16P3 Gene

MRPS16P3 (Mitochondrial Ribosomal Protein S16 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPS16P3 Gene

Genomics for MRPS16P3 Gene

Regulatory Elements for MRPS16P3 Gene

Enhancers for MRPS16P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F035586 1.5 VISTA Ensembl ENCODE 16.3 -113.3 -113290 7.8 PKNOX1 FEZF1 ZNF2 ZNF121 GLIS2 KLF7 FOS ZNF263 REST SMARCB1 HMGXB4 RASD2 MRPS16P3 COX7BP1 ENSG00000238153 LOC441996 ENSG00000229971 MB RPS15AP38 APOL6
GH22F035371 1.5 FANTOM5 ENCODE 16.2 -331.3 -331307 2.1 PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 HMGXB4 COX7BP1 ENSG00000238153 MRPS16P3 LOC441996 TOM1 HMOX1 APOL6 ENSG00000282041 ENSG00000282602
GH22F035362 1.3 Ensembl ENCODE 16.2 -339.9 -339856 2.2 ARID4B FEZF1 ZNF2 ZNF121 GLIS2 FOS TSHZ1 ZNF488 PPARG ZNF518A COX7BP1 ENSG00000238153 MRPS16P3 LOC441996 HMGXB4 ENSG00000282602 PIR42792
GH22F035477 1.2 Ensembl ENCODE 16.2 -225.5 -225544 1.6 HDAC1 PKNOX1 ZNF76 KLF17 SIN3A GLI4 RAD21 ZNF121 ZNF366 ZNF391 MRPS16P3 COX7BP1 ENSG00000238153 LOC441996 RASD2 APOL6 PIR40259 LOC100131536
GH22F035396 1.1 ENCODE 16.2 -304.7 -304721 5.6 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 FOS HMGXB4 COX7BP1 ENSG00000238153 MRPS16P3 LOC441996 MCM5 HMOX1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPS16P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for MRPS16P3 Gene

Chromosome:
22
Start:
35,703,765 bp from pter
End:
35,704,176 bp from pter
Size:
412 bases
Orientation:
Plus strand

Genomic View for MRPS16P3 Gene

Genes around MRPS16P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPS16P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPS16P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPS16P3 Gene

Proteins for MRPS16P3 Gene

Post-translational modifications for MRPS16P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPS16P3 Gene

Domains & Families for MRPS16P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPS16P3 Gene

Function for MRPS16P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPS16P3 Gene

Localization for MRPS16P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRPS16P3 Gene

Pathways & Interactions for MRPS16P3 Gene

SuperPathways for MRPS16P3 Gene

No Data Available

Interacting Proteins for MRPS16P3 Gene

Gene Ontology (GO) - Biological Process for MRPS16P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPS16P3 Gene

Transcripts for MRPS16P3 Gene

mRNA/cDNA for MRPS16P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MRPS16P3 Gene

No ASD Table

Relevant External Links for MRPS16P3 Gene

GeneLoc Exon Structure for
MRPS16P3
ECgene alternative splicing isoforms for
MRPS16P3

Expression for MRPS16P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRPS16P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPS16P3 Gene:

MRPS16P3
genes like me logo Genes that share expression patterns with MRPS16P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MRPS16P3 Gene

Orthologs for MRPS16P3 Gene

Evolution for MRPS16P3 Gene

ENSEMBL:
Gene Tree for MRPS16P3 (if available)
TreeFam:
Gene Tree for MRPS16P3 (if available)

No data available for Orthologs for MRPS16P3 Gene

Paralogs for MRPS16P3 Gene

No data available for Paralogs for MRPS16P3 Gene

Variants for MRPS16P3 Gene

Relevant External Links for MRPS16P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPS16P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPS16P3 Gene

Disorders for MRPS16P3 Gene

No disorders were found for MRPS16P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MRPS16P3 Gene

Publications for MRPS16P3 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z. … Gerstein M. (Genomics 2003) 2 3 64

Products for MRPS16P3 Gene

Sources for MRPS16P3 Gene

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