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Aliases for MRPS14 Gene

Aliases for MRPS14 Gene

  • Mitochondrial Ribosomal Protein S14 2 3 5
  • MRP-S14 3 4
  • S14mt 3 4
  • 28S Ribosomal Protein S14, Mitochondrial 3
  • Mitochondrial 28S Ribosomal Protein S14 3
  • DJ262D12.2 3
  • HSMRPS14 3

External Ids for MRPS14 Gene

Previous GeneCards Identifiers for MRPS14 Gene

  • GC01M172507
  • GC01M170411
  • GC01M171562
  • GC01M172222
  • GC01M171714
  • GC01M173248
  • GC01M174979
  • GC01M146209

Summaries for MRPS14 Gene

Entrez Gene Summary for MRPS14 Gene

  • Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein that belongs to the ribosomal protein S14P family. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2010]

GeneCards Summary for MRPS14 Gene

MRPS14 (Mitochondrial Ribosomal Protein S14) is a Protein Coding gene. Among its related pathways are Mitochondrial translation and Viral mRNA Translation. GO annotations related to this gene include poly(A) RNA binding and structural constituent of ribosome.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPS14 Gene

Genomics for MRPS14 Gene

Regulatory Elements for MRPS14 Gene

Enhancers for MRPS14 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F175124 1.3 FANTOM5 Ensembl 11.1 -101.7 -101653 1.0 HDGF YBX3 ELF3 ARNT YBX1 ZNF2 RAD21 RFX5 ZNF366 ZNF143 KIAA0040 MRPS14 TNN
GH01F175513 0.7 Ensembl ENCODE 11 -491.2 -491232 1.6 JUN MAX REST PLRG1 ZIC2 RAD21 POLR2A SMARCA4 PRDM10 FOXP2 MRPS14 TNR TNR-IT1 GC01P175473
GH01F175572 0.5 ENCODE 10.3 -550.6 -550619 2.5 PKNOX1 FEZF1 GLI4 ZNF2 GLIS2 ZNF302 KLF7 YY2 TSHZ1 ZNF488 TNR-IT1 LINC01657 LOC101928696 MRPS14 TNR GC01M175557 LOC101928727
GH01F175022 1.1 ENCODE 0.8 +0.1 60 2.0 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 LOC101928696 GC01M175022 ENSG00000206659 MRPS14
GH01F175028 1.1 Ensembl ENCODE 0.4 -6.2 -6219 1.6 MLX CREB3L1 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 MEF2D RABGAP1L TNN MRPS14 GC01P175044
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MRPS14 on UCSC Golden Path with GeneCards custom track

Promoters for MRPS14 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001751881 355 2200 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1

Genomic Location for MRPS14 Gene

Chromosome:
1
Start:
175,010,789 bp from pter
End:
175,023,455 bp from pter
Size:
12,667 bases
Orientation:
Minus strand

Genomic View for MRPS14 Gene

Genes around MRPS14 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPS14 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPS14 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPS14 Gene

Proteins for MRPS14 Gene

  • Protein details for MRPS14 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O60783-RT14_HUMAN
    Recommended name:
    28S ribosomal protein S14, mitochondrial
    Protein Accession:
    O60783
    Secondary Accessions:
    • Q5R358

    Protein attributes for MRPS14 Gene

    Size:
    128 amino acids
    Molecular mass:
    15139 Da
    Quaternary structure:
    • Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins. Interacts with LIAT1 (By similarity).

    Three dimensional structures from OCA and Proteopedia for MRPS14 Gene

neXtProt entry for MRPS14 Gene

Post-translational modifications for MRPS14 Gene

No Post-translational modifications

Other Protein References for MRPS14 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for MRPS14 Gene

Domains & Families for MRPS14 Gene

Gene Families for MRPS14 Gene

Protein Domains for MRPS14 Gene

Blocks:
InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for MRPS14 Gene

Graphical View of Domain Structure for InterPro Entry

O60783

UniProtKB/Swiss-Prot:

RT14_HUMAN :
  • Belongs to the ribosomal protein S14P family.
Family:
  • Belongs to the ribosomal protein S14P family.
genes like me logo Genes that share domains with MRPS14: view

Function for MRPS14 Gene

Gene Ontology (GO) - Molecular Function for MRPS14 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003735 structural constituent of ribosome TAS 10938081
GO:0044822 poly(A) RNA binding IDA 22681889
genes like me logo Genes that share ontologies with MRPS14: view

Phenotypes for MRPS14 Gene

GenomeRNAi human phenotypes for MRPS14:
genes like me logo Genes that share phenotypes with MRPS14: view

Animal Model Products

miRNA for MRPS14 Gene

miRTarBase miRNAs that target MRPS14

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MRPS14 Gene

Localization for MRPS14 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MRPS14 Gene

Mitochondrion.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MRPS14 Gene COMPARTMENTS Subcellular localization image for MRPS14 gene
Compartment Confidence
mitochondrion 5
nucleus 5
cytosol 1
extracellular 1

Gene Ontology (GO) - Cellular Components for MRPS14 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005739 mitochondrion IDA --
GO:0005743 mitochondrial inner membrane TAS --
GO:0005761 mitochondrial ribosome NAS 10938081
GO:0005763 mitochondrial small ribosomal subunit IBA --
genes like me logo Genes that share ontologies with MRPS14: view

Pathways & Interactions for MRPS14 Gene

genes like me logo Genes that share pathways with MRPS14: view

Gene Ontology (GO) - Biological Process for MRPS14 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006412 translation IEA,NAS 10938081
GO:0070125 mitochondrial translational elongation TAS --
GO:0070126 mitochondrial translational termination TAS --
genes like me logo Genes that share ontologies with MRPS14: view

No data available for SIGNOR curated interactions for MRPS14 Gene

Transcripts for MRPS14 Gene

mRNA/cDNA for MRPS14 Gene

Unigene Clusters for MRPS14 Gene

Mitochondrial ribosomal protein S14:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRPS14 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c ^ 5 ^ 6
SP1: - - - - -
SP2: - -
SP3: - - -
SP4: - -
SP5: - -

Relevant External Links for MRPS14 Gene

GeneLoc Exon Structure for
MRPS14
ECgene alternative splicing isoforms for
MRPS14

Expression for MRPS14 Gene

mRNA expression in normal human tissues for MRPS14 Gene

Protein differential expression in normal tissues from HIPED for MRPS14 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (23.6), Lung (12.0), and Heart (6.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for MRPS14 Gene



Protein tissue co-expression partners for MRPS14 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of MRPS14 Gene:

MRPS14

SOURCE GeneReport for Unigene cluster for MRPS14 Gene:

Hs.654858
genes like me logo Genes that share expression patterns with MRPS14: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for MRPS14 Gene

Orthologs for MRPS14 Gene

This gene was present in the common ancestor of animals.

Orthologs for MRPS14 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MRPS14 34 35
  • 99.48 (n)
dog
(Canis familiaris)
Mammalia MRPS14 34
  • 89.32 (n)
-- 35
  • 89 (a)
OneToMany
-- 35
  • 86 (a)
OneToMany
cow
(Bos Taurus)
Mammalia MRPS14 34 35
  • 86.72 (n)
-- 35
  • 83 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Mrps14 34 16 35
  • 86.46 (n)
rat
(Rattus norvegicus)
Mammalia Mrps14 34
  • 85.68 (n)
oppossum
(Monodelphis domestica)
Mammalia MRPS14 35
  • 84 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MRPS14 35
  • 81 (a)
OneToOne
chicken
(Gallus gallus)
Aves MRPS14 34 35
  • 71.16 (n)
lizard
(Anolis carolinensis)
Reptilia MRPS14 35
  • 74 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia mrps14 34
  • 69.53 (n)
Str.19943 34
zebrafish
(Danio rerio)
Actinopterygii mrps14 34 35
  • 69.37 (n)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.2810 34
fruit fly
(Drosophila melanogaster)
Insecta mRpS14 34 35
  • 57.6 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009077 34
  • 51.82 (n)
worm
(Caenorhabditis elegans)
Secernentea mrps-14 35
  • 24 (a)
OneToOne
Species where no ortholog for MRPS14 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for MRPS14 Gene

ENSEMBL:
Gene Tree for MRPS14 (if available)
TreeFam:
Gene Tree for MRPS14 (if available)

Paralogs for MRPS14 Gene

No data available for Paralogs for MRPS14 Gene

Variants for MRPS14 Gene

Sequence variations from dbSNP and Humsavar for MRPS14 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs10465483 -- 175,019,827(+) ATTAA(A/G)CTGCC intron-variant
rs10489330 -- 175,015,749(-) ACTTA(C/T)CAGAT intron-variant
rs10489331 -- 175,015,661(-) AGCTA(C/T)TGCTG intron-variant
rs1058741 -- 175,014,497(-) GTTTC(A/G)TGTCA nc-transcript-variant, utr-variant-3-prime
rs10710388 -- 175,024,425(+) AAAAA(-/A)GATAC upstream-variant-2KB

Variation tolerance for MRPS14 Gene

Residual Variation Intolerance Score: 44% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.29; 6.40% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MRPS14 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPS14

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MRPS14 Gene

Disorders for MRPS14 Gene

Relevant External Links for MRPS14

Genetic Association Database (GAD)
MRPS14
Human Genome Epidemiology (HuGE) Navigator
MRPS14
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MRPS14

No disorders were found for MRPS14 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPS14 Gene

Publications for MRPS14 Gene

  1. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 3 46 64
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  4. A proteomics approach to the identification of mammalian mitochondrial small subunit ribosomal proteins. (PMID: 10938081) Koc E.C. … Spremulli L.L. (J. Biol. Chem. 2000) 3 4 64
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64

Products for MRPS14 Gene

Sources for MRPS14 Gene

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