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Aliases for MRPL49P2 Gene

Subcategory (RNA class) for MRPL49P2 Gene

lncRNA

Aliases for MRPL49P2 Gene

  • Mitochondrial Ribosomal Protein L49 Pseudogene 2 2 3 5

External Ids for MRPL49P2 Gene

ORGUL Members for MRPL49P2 Gene

Previous GeneCards Identifiers for MRPL49P2 Gene

  • GC08P015865
  • GC08U900209
  • GC08P016242
  • GC08P016276

Summaries for MRPL49P2 Gene

GeneCards Summary for MRPL49P2 Gene

MRPL49P2 (Mitochondrial Ribosomal Protein L49 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for MRPL49P2 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for MRPL49P2

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MRPL49P2 Gene

Genomics for MRPL49P2 Gene

Regulatory Elements for MRPL49P2 Gene

Enhancers for MRPL49P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G016361 0.9 FANTOM5 Ensembl ENCODE 0.4 -12.2 -12157 1.9 ATF2 MSR1 GC08M016350 MRPL49P2
GH08G016407 1.1 FANTOM5 ENCODE dbSUPER 0.3 +34.3 34302 3.8 FOSL1 POLR2A FOS ATF2 MAFK NFE2L2 MRPL49P2 GC08M016443
GH08G016364 0.8 FANTOM5 ENCODE 0.4 -9.8 -9792 0.2 FOS MAFK NFE2L2 MSR1 MRPL49P2 GC08M016350
GH08G016371 0.4 ENCODE 0.7 -3.0 -2996 0.3 SMARCA4 MRPL49P2 GC08M016350
GH08G016415 0.6 ENCODE dbSUPER 0.3 +41.7 41726 1.0 FOS GC08M016443 MRPL49P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPL49P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MRPL49P2 Gene

Chromosome:
8
Start:
16,374,618 bp from pter
End:
16,375,086 bp from pter
Size:
469 bases
Orientation:
Plus strand

Genomic View for MRPL49P2 Gene

Genes around MRPL49P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL49P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL49P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL49P2 Gene

ORGUL Member Location for MRPL49P2 Gene

ORGUL Member Location for MRPL49P2 gene

Proteins for MRPL49P2 Gene

Post-translational modifications for MRPL49P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL49P2 Gene

Domains & Families for MRPL49P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPL49P2 Gene

Function for MRPL49P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL49P2 Gene

Localization for MRPL49P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRPL49P2 Gene

Pathways & Interactions for MRPL49P2 Gene

SuperPathways for MRPL49P2 Gene

No Data Available

Interacting Proteins for MRPL49P2 Gene

Gene Ontology (GO) - Biological Process for MRPL49P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPL49P2 Gene

Drugs & Compounds for MRPL49P2 Gene

No Compound Related Data Available

Transcripts for MRPL49P2 Gene

fRNAdb Secondary structures for MRPL49P2 Gene

  • FR072472

mRNA/cDNA for MRPL49P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL49P2 Gene

No ASD Table

Relevant External Links for MRPL49P2 Gene

GeneLoc Exon Structure for
MRPL49P2
ECgene alternative splicing isoforms for
MRPL49P2

Expression for MRPL49P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRPL49P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPL49P2 Gene:

MRPL49P2
genes like me logo Genes that share expression patterns with MRPL49P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPL49P2 Gene

Orthologs for MRPL49P2 Gene

Evolution for MRPL49P2 Gene

ENSEMBL:
Gene Tree for MRPL49P2 (if available)
TreeFam:
Gene Tree for MRPL49P2 (if available)

No data available for Orthologs for MRPL49P2 Gene

Paralogs for MRPL49P2 Gene

No data available for Paralogs for MRPL49P2 Gene

Variants for MRPL49P2 Gene

Relevant External Links for MRPL49P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL49P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPL49P2 Gene

Disorders for MRPL49P2 Gene

Relevant External Links for MRPL49P2

Genetic Association Database (GAD)
MRPL49P2

No disorders were found for MRPL49P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL49P2 Gene

Publications for MRPL49P2 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z. … Gerstein M. (Genomics 2003) 2 3 64
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64
  4. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64

Products for MRPL49P2 Gene

Sources for MRPL49P2 Gene

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