Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MRPL45P2 Gene

Aliases for MRPL45P2 Gene

  • Mitochondrial Ribosomal Protein L45 Pseudogene 2 2 3
  • CTD-2026D20.3 5

External Ids for MRPL45P2 Gene

Previous GeneCards Identifiers for MRPL45P2 Gene

  • GC17M045871
  • GC17U900364
  • GC17M045528

Summaries for MRPL45P2 Gene

GeneCards Summary for MRPL45P2 Gene

MRPL45P2 (Mitochondrial Ribosomal Protein L45 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPL45P2 Gene

Genomics for MRPL45P2 Gene

Regulatory Elements for MRPL45P2 Gene

Enhancers for MRPL45P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F046741 1.3 Ensembl ENCODE 91.4 +749.9 749902 2.6 ZNF493 ZFP64 SIN3A FEZF1 ZNF2 ZNF121 GLIS2 KLF7 FOS ZNF202 MRPL45P2 ARL17B LOC102724391 KANSL1-AS1 KANSL1 RPS7P11 ENSG00000253347 NSFP1 RPS2P47 WNT3
GH17F047068 1.5 Ensembl ENCODE 66.9 +421.6 421616 4.8 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF548 KANSL1 ARL17B MRPL45P2 ENSG00000266601 CDC27 ENSG00000264701 LOC101927060 LRRC37A17P RPS7P11 RPS2P47
GH17F047940 1.2 ENCODE 72.7 -449.2 -449237 2.0 HDGF PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A YBX1 DMAP1 ZNF2 MRPL45P2 ENSG00000264701 SCRN2 ENSG00000230532 RPS2P47 ENSG00000266601 LRRC37A17P ENSG00000264243 RN7SL125P LOC102724532
GH17F048017 1.2 Ensembl ENCODE 66.2 -525.4 -525350 1.5 ZFP64 ARID4B ZNF48 ZSCAN9 DNMT3B ZNF2 RAD21 ZEB1 ZNF121 ZNF354C MRPL45P2 ENSG00000253347 RPS2P47 CDC27 SCRN2 ENSG00000266601 CDK5RAP3 NFE2L1 ENSG00000264701 CBX1
GH17F048044 1.5 VISTA ENCODE 51 -558.5 -558487 13.0 CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 MRPL45P2 SNX11 ENSG00000266601 COPZ2 ENSG00000253347 SCRN2 CDK5RAP3 ENSG00000264701 KPNB1 CBX1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPL45P2 on UCSC Golden Path with GeneCards custom track

Promoters for MRPL45P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001536332 120 1401 HDGF PKNOX1 ARNT MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1

Genomic Location for MRPL45P2 Gene

Chromosome:
17
Start:
47,450,227 bp from pter
End:
47,492,620 bp from pter
Size:
42,394 bases
Orientation:
Minus strand

Genomic View for MRPL45P2 Gene

Genes around MRPL45P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL45P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL45P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL45P2 Gene

Proteins for MRPL45P2 Gene

Post-translational modifications for MRPL45P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL45P2 Gene

Domains & Families for MRPL45P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPL45P2 Gene

Function for MRPL45P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL45P2 Gene

Localization for MRPL45P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRPL45P2 Gene

Pathways & Interactions for MRPL45P2 Gene

SuperPathways for MRPL45P2 Gene

No Data Available

Interacting Proteins for MRPL45P2 Gene

Gene Ontology (GO) - Biological Process for MRPL45P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPL45P2 Gene

Transcripts for MRPL45P2 Gene

mRNA/cDNA for MRPL45P2 Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRPL45P2 Gene

Mitochondrial ribosomal protein L45 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL45P2 Gene

No ASD Table

Relevant External Links for MRPL45P2 Gene

GeneLoc Exon Structure for
MRPL45P2
ECgene alternative splicing isoforms for
MRPL45P2

Expression for MRPL45P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRPL45P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPL45P2 Gene:

MRPL45P2

SOURCE GeneReport for Unigene cluster for MRPL45P2 Gene:

Hs.537279
genes like me logo Genes that share expression patterns with MRPL45P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MRPL45P2 Gene

Orthologs for MRPL45P2 Gene

Evolution for MRPL45P2 Gene

ENSEMBL:
Gene Tree for MRPL45P2 (if available)
TreeFam:
Gene Tree for MRPL45P2 (if available)

No data available for Orthologs for MRPL45P2 Gene

Paralogs for MRPL45P2 Gene

No data available for Paralogs for MRPL45P2 Gene

Variants for MRPL45P2 Gene

Sequence variations from dbSNP and Humsavar for MRPL45P2 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs10599681 -- 47,468,070(+) TGAGT(-/GAGT)TCTCA intron-variant
rs10685338 -- 47,466,554(+) AAAAA(-/A)CCCAG intron-variant
rs11079776 -- 47,469,527(+) TAGAG(C/T)TGATT intron-variant
rs111295315 -- 47,492,725(+) GAGCG(C/T)TTGAA upstream-variant-2KB
rs111350317 -- 47,484,796(+) CCGGG(A/C)GCAGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MRPL45P2 Gene

Variant ID Type Subtype PubMed ID
nsv575462 CNV loss 21841781
nsv833468 CNV gain 17160897
nsv9566 CNV gain 18304495
nsv960119 CNV duplication 23825009
nsv978433 CNV duplication 23825009
nsv525267 CNV gain 19592680
nsv516872 CNV gain+loss 19592680
nsv471701 CNV gain 15918152
nsv471513 CNV gain 19718026
nsv470590 CNV loss 18288195
nsv469573 CNV gain 16826518
nsv457821 CNV loss 19166990
nsv428344 CNV gain 18775914
nsv1146669 OTHER inversion 26484159
nsv1127578 CNV deletion 24896259
esv3893027 CNV loss 25118596
esv3640702 CNV gain 21293372
esv33689 CNV loss 17666407
esv2758693 CNV gain+loss 17122850
esv2672965 CNV deletion 23128226

Relevant External Links for MRPL45P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL45P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRPL45P2 Gene

Disorders for MRPL45P2 Gene

Relevant External Links for MRPL45P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MRPL45P2

No disorders were found for MRPL45P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL45P2 Gene

Publications for MRPL45P2 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z. … Gerstein M. (Genomics 2003) 2 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MRPL45P2 Gene

Sources for MRPL45P2 Gene

Content
Loading form....