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Aliases for MRPL45P2 Gene

Aliases for MRPL45P2 Gene

  • Mitochondrial Ribosomal Protein L45 Pseudogene 2 2 3 5

External Ids for MRPL45P2 Gene

Previous GeneCards Identifiers for MRPL45P2 Gene

  • GC17M045871
  • GC17U900364
  • GC17M045528

Summaries for MRPL45P2 Gene

GeneCards Summary for MRPL45P2 Gene

MRPL45P2 (Mitochondrial Ribosomal Protein L45 Pseudogene 2) is a Pseudogene.

Additional gene information for MRPL45P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPL45P2 Gene

Genomics for MRPL45P2 Gene

Regulatory Elements for MRPL45P2 Gene

Enhancers for MRPL45P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H047941 1.4 ENCODE dbSUPER 136.5 -449.2 -449237 1 MLX DMAP1 YBX1 YY1 SLC30A9 ZNF416 SP3 NFYC SSRP1 ZNF610 MRPL45P2 UBE2Z EFCAB13 SP2 ENSG00000264701 CDK5RAP3 ENSG00000266601 RPS2P47 ENSG00000253347 SCRN2
GH17H047700 1.9 FANTOM5 Ensembl ENCODE dbSUPER 50.5 -212.4 -212366 9 HDGF PKNOX1 ATF1 ARNT FEZF1 TCF12 GLIS2 CBX5 GATA2 ATF7 MRPL45P2 TBKBP1 EFCAB13 ENSG00000253347 SP2 ENSG00000266601 RPS7P11 ENSG00000264701 LRRC37A17P CDK5RAP3
GH17H047647 1.7 FANTOM5 ENCODE dbSUPER 40.2 -157.5 -157465 4 MLX DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SSRP1 ZNF610 GLIS1 MRPL45P2 ENSG00000266601 EFCAB13 SP2 CDC27 ENSG00000264701 ENSG00000253347 TBKBP1 KPNB1 LRRC37A17P
GH17H048011 1.9 FANTOM5 Ensembl ENCODE dbSUPER 35.9 -520.8 -520812 4 HDGF PKNOX1 ARNT SIN3A ZNF2 ZBTB7B ZNF121 GLIS2 ZNF207 ZNF143 MRPL45P2 SP2 PRR15L SCRN2 COPZ2 CDK5RAP3 SKAP1 CBX1 SUMO2P17 EFCAB13
GH17H048044 1.7 VISTA ENCODE dbSUPER 32.8 -558.5 -558487 13 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC PPARGC1A MEF2D SSRP1 GLIS1 ENSG00000266601 SP2 SNX11 KPNB1 MRPL45P2 EFCAB13 CBX1 UBE2Z CALCOCO2 COPZ2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPL45P2 on UCSC Golden Path with GeneCards custom track

Promoters for MRPL45P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000095181 120 1401 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2

Genomic Location for MRPL45P2 Gene

Chromosome:
17
Start:
47,450,227 bp from pter
End:
47,492,620 bp from pter
Size:
42,394 bases
Orientation:
Minus strand

Genomic View for MRPL45P2 Gene

Genes around MRPL45P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL45P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL45P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL45P2 Gene

Proteins for MRPL45P2 Gene

Post-translational modifications for MRPL45P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL45P2 Gene

Domains & Families for MRPL45P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPL45P2 Gene

Function for MRPL45P2 Gene

Phenotypes From GWAS Catalog for MRPL45P2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for MRPL45P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL45P2 Gene

Localization for MRPL45P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPL45P2 Gene

Pathways & Interactions for MRPL45P2 Gene

SuperPathways for MRPL45P2 Gene

No Data Available

Interacting Proteins for MRPL45P2 Gene

Gene Ontology (GO) - Biological Process for MRPL45P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPL45P2 Gene

Drugs & Compounds for MRPL45P2 Gene

No Compound Related Data Available

Transcripts for MRPL45P2 Gene

mRNA/cDNA for MRPL45P2 Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRPL45P2 Gene

Mitochondrial ribosomal protein L45 pseudogene 2:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for MRPL45P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL45P2 Gene

No ASD Table

Relevant External Links for MRPL45P2 Gene

GeneLoc Exon Structure for
MRPL45P2
ECgene alternative splicing isoforms for
MRPL45P2

Expression for MRPL45P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRPL45P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPL45P2 Gene:

MRPL45P2

SOURCE GeneReport for Unigene cluster for MRPL45P2 Gene:

Hs.537279
genes like me logo Genes that share expression patterns with MRPL45P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPL45P2 Gene

Orthologs for MRPL45P2 Gene

Evolution for MRPL45P2 Gene

ENSEMBL:
Gene Tree for MRPL45P2 (if available)
TreeFam:
Gene Tree for MRPL45P2 (if available)

No data available for Orthologs for MRPL45P2 Gene

Paralogs for MRPL45P2 Gene

No data available for Paralogs for MRPL45P2 Gene

Variants for MRPL45P2 Gene

Sequence variations from dbSNP and Humsavar for MRPL45P2 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000071926 -- 47,461,046(+) AAAAC(-/A)AAAAA intron-variant
rs1000294606 -- 47,453,896(+) GATGC(A/G)AACAA intron-variant
rs1000410835 -- 47,491,638(+) TCCTC(C/G)CACCG intron-variant
rs1000497717 -- 47,455,705(+) GACAG(A/G)GTGAG intron-variant
rs1000529807 -- 47,460,721(+) GGAAT(A/G)GCAAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MRPL45P2 Gene

Variant ID Type Subtype PubMed ID
esv2672965 CNV deletion 23128226
esv2758693 CNV gain+loss 17122850
esv33689 CNV loss 17666407
esv3640702 CNV gain 21293372
esv3893027 CNV loss 25118596
nsv1127578 CNV deletion 24896259
nsv1146669 OTHER inversion 26484159
nsv428344 CNV gain 18775914
nsv457821 CNV loss 19166990
nsv469573 CNV gain 16826518
nsv470590 CNV loss 18288195
nsv471513 CNV gain 19718026
nsv471701 CNV gain 15918152
nsv516872 CNV gain+loss 19592680
nsv525267 CNV gain 19592680
nsv575462 CNV loss 21841781
nsv833468 CNV gain 17160897
nsv9566 CNV gain 18304495
nsv960119 CNV duplication 23825009
nsv978433 CNV duplication 23825009

Relevant External Links for MRPL45P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL45P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRPL45P2 Gene

Disorders for MRPL45P2 Gene

Relevant External Links for MRPL45P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MRPL45P2

No disorders were found for MRPL45P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL45P2 Gene

Publications for MRPL45P2 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z … Gerstein M (Genomics 2003) 2 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for MRPL45P2 Gene

Sources for MRPL45P2 Gene

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