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Aliases for MRPL42P2 Gene

Subcategory (RNA class) for MRPL42P2 Gene

lncRNA

Aliases for MRPL42P2 Gene

  • Mitochondrial Ribosomal Protein L42 Pseudogene 2 2 3 5

External Ids for MRPL42P2 Gene

ORGUL Members for MRPL42P2 Gene

Previous GeneCards Identifiers for MRPL42P2 Gene

  • GC06M016223
  • GC06U900428
  • GC06P016279

Summaries for MRPL42P2 Gene

GeneCards Summary for MRPL42P2 Gene

MRPL42P2 (Mitochondrial Ribosomal Protein L42 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPL42P2 Gene

Genomics for MRPL42P2 Gene

Regulatory Elements for MRPL42P2 Gene

Enhancers for MRPL42P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F016168 0.6 Ensembl ENCODE 0.8 -3.0 -3040 1.0 HDAC1 ARNT TBL1XR1 WRNIP1 RAD21 CHAMP1 ZNF766 GATA2 ZNF654 ZEB2 MYLIP RNU6-1114P ENSG00000217078 MRPL42P2
GH06F016172 0.2 ENCODE 0.8 +1.8 1774 1.4 ZNF664 HLF RNU6-1114P MYLIP MRPL42P2
GH06F016174 0.6 ENCODE 0.8 +3.1 3101 1.1 RNU6-1114P MYLIP MRPL42P2
GH06F016179 0.8 Ensembl ENCODE 0.4 +8.7 8719 1.9 ATF3 HLF MAX CEBPB ZBTB33 MYC RNU6-1114P MRPL42P2
GH06F016182 0.8 Ensembl ENCODE 0.4 +12.5 12531 2.9 HDGF HDAC1 PKNOX1 ARNT TBL1XR1 NFRKB RAD21 CHAMP1 YY1 ZNF143 MRPL42P2 RNU6-1114P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MRPL42P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MRPL42P2 Gene

Chromosome:
6
Start:
16,171,606 bp from pter
End:
16,172,034 bp from pter
Size:
429 bases
Orientation:
Plus strand

Genomic View for MRPL42P2 Gene

Genes around MRPL42P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL42P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL42P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL42P2 Gene

Proteins for MRPL42P2 Gene

Post-translational modifications for MRPL42P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL42P2 Gene

Domains & Families for MRPL42P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPL42P2 Gene

Function for MRPL42P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL42P2 Gene

Localization for MRPL42P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRPL42P2 Gene

Pathways & Interactions for MRPL42P2 Gene

SuperPathways for MRPL42P2 Gene

No Data Available

Interacting Proteins for MRPL42P2 Gene

Gene Ontology (GO) - Biological Process for MRPL42P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPL42P2 Gene

Transcripts for MRPL42P2 Gene

mRNA/cDNA for MRPL42P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL42P2 Gene

No ASD Table

Relevant External Links for MRPL42P2 Gene

GeneLoc Exon Structure for
MRPL42P2
ECgene alternative splicing isoforms for
MRPL42P2

Expression for MRPL42P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRPL42P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPL42P2 Gene:

MRPL42P2
genes like me logo Genes that share expression patterns with MRPL42P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MRPL42P2 Gene

Orthologs for MRPL42P2 Gene

Evolution for MRPL42P2 Gene

ENSEMBL:
Gene Tree for MRPL42P2 (if available)
TreeFam:
Gene Tree for MRPL42P2 (if available)

No data available for Orthologs for MRPL42P2 Gene

Paralogs for MRPL42P2 Gene

No data available for Paralogs for MRPL42P2 Gene

Variants for MRPL42P2 Gene

Relevant External Links for MRPL42P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL42P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPL42P2 Gene

Disorders for MRPL42P2 Gene

Relevant External Links for MRPL42P2

Genetic Association Database (GAD)
MRPL42P2

No disorders were found for MRPL42P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL42P2 Gene

Publications for MRPL42P2 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z. … Gerstein M. (Genomics 2003) 2 3 64
  2. Genetic variants influencing circulating lipid levels and risk of coronary artery disease. (PMID: 20864672) Waterworth D.M. … Sandhu M.S. (Arterioscler. Thromb. Vasc. Biol. 2010) 46 64

Products for MRPL42P2 Gene

Sources for MRPL42P2 Gene

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