MRPL41 Gene
protein-coding GIFtS : 46
GCID: GC09 P140445
mitochondrial ribosomal protein L41
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Aliasesfor MRPL41 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Mitochondrial Ribosomal Protein L41 1 2 39S Ribosomal Protein L27 Homolog2 3 MRPL271 2 3 5 L41mt2 3 BMRP1 2 3 MRP-L412 3 RPML271 2 3 MRP-L27 Homolog2 3 MRP-L271 2 PIG31 Bcl-2-Interacting Mitochondrial Ribosomal Protein L412 3 39S Ribosomal Protein L41, Mitochondrial2 Cell Proliferation-Inducing Gene 3 Protein2 3 Proliferation-Inducing Gene 32
Export aliases for MRPL41 gene to outside databases Previous GC identifers: GC09P131796 GC09M132098 GC09P133748 GC09P135664 GC09P137722 GC09P139565 GC09P109910
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Summariesfor MRPL41 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for MRPL41 : Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein that belongs to the YmL27 ribosomal protein family. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: RM41_HUMAN, Q8IXM3 Function : Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle. Enhancesp53/TP53 stability, thereby contributing to p53/TP53-induced apoptosis in response to growth-inhibitory condition. Enhances p53/TP53 translocation to the mitochondria. Has the ability to arrest the cell cycle at the G1 phase, possibly by stabilizing the CDKN1A and CDKN1B (p27Kip1) proteins Gene Wiki entry for MRPL41 (Mitochondrial ribosomal protein L41)
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Genomic Viewsfor MRPL41 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000009.11 NC_018920.1 NT_024000.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MRPL41 gene promoter: E2F-3a E2F-4 E2F-5 Tal-1 Nkx2-5 E2F-2 E47 NRF-2 E2F-1 E2F Other transcription factors Search SABiosciences Chromatin IP Primers for MRPL41 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MRPL41
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 9q34.3 Ensembl cytogenetic band: 9q34.3 HGNC cytogenetic band: 9q34.3 MRPL41 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 9 GeneLoc Exon Structure
GeneLoc location for GC09P140445: view genomic region
(about GC identifiers )
Start:
140,445,651 bp from pter
End:
140,447,007 bp from pter
Size:
1,357 bases
Orientation:
plus strand
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Proteinsfor MRPL41 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: RM41_HUMAN, Q8IXM3 (See
protein sequence )Recommended Name: 39S ribosomal protein L41, mitochondrial precursor Size : 137 amino acids; 15383 Da
Subunit : Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinctproteins. Interacts with BCL2
Subcellular location : Mitochondrion
Secondary accessions : Q96Q49Explore the universe of human proteins at neXtProt for MRPL41: NX_Q8IXM3 MRPL41 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_115866.1 ENSEMBL proteins: ENSP00000360498 Human Recombinant Protein Products: Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view) : About this table
MRPL41 for ontologies About GeneDecksing MRPL41 Antibody Products: Assay Products for MRPL41:
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Protein
Domains / Familiesfor MRPL41 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MRPL41 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q8IXM3 ProtoNet protein and cluster: Q8IXM3
UniProtKB/Swiss-Prot: RM41_HUMAN, Q8IXM3 Similarity : Belongs to the ribosomal protein L41 family
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Functionfor MRPL41 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: RM41_HUMAN, Q8IXM3 Function : Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle. Enhancesp53/TP53 stability, thereby contributing to p53/TP53-induced apoptosis in response to growth-inhibitory condition. Enhances p53/TP53 translocation to the mitochondria. Has the ability to arrest the cell cycle at the G1 phase, possibly by stabilizing the CDKN1A and CDKN1B (p27Kip1) proteins
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MRPL41 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MRPL41OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MRPL41 (NM_032477 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MRPL41 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MRPL41
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MRPL41
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0003735 structural constituent of ribosome
IDA 16024796
MRPL41 for ontologies About GeneDecksing
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Pathways & Interactionsfor MRPL41 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MRPL41 STRING Interaction
Network Preview (showing 5 interactants - click image to see more details)5/236 Interacting proteins for MRPL41 (Q8IXM3 2 , 3 ENSP00000360498 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 236 )About this table Gene Ontology (GO): 3 biological process terms (GO ID links to tree view) : About this table
MRPL41 for ontologies About GeneDecksing
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Drugs & Compoundsfor MRPL41 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for MRPL41 Search CenterWatch for drugs/clinical trials and news about MRPL41 / RM41
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Transcriptsfor MRPL41 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MRPL41 gene: NM_032477.2 Unigene Cluster for MRPL41:
Mitochondrial ribosomal protein L41 Hs.44017 [show with all ESTs ] Unigene Representative Sequence: BQ955623 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000371443 (uc004cnh.4 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MRPL41 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MRPL41OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MRPL41 (NM_032477 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MRPL41 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MRPL41
Additional cDNA sequence: AY232291.1 BC040035.1
10 DOTS entries : DT.87001237 DT.450215
DT.87077214 DT.91779100 DT.98131734 DT.121187687 DT.100883254 DT.100883250 DT.100883257 DT.447660 24/443 AceView cDNA sequences (see all 443 ):
AA922694 BF437902 AI568381 AI300803 AI298799 AI681348 BE882251 AI375476 BE676728 BE675258 AI475844 BM512028 AJ346111 AA969171 AI400599 BU734356 BM704939 AA907011 AI083690 AI290984 AI435280 BF590212 BM707716 AI281964 GeneLoc Exon Structure
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Expression for MRPL41 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MRPL41 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GGCGTCCTGG
About this image MRPL41 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table Stem Cell Differentiation: 1 LifeMap Cell Name Category Definitive endoderm-like cells (A scalable, suspensi... )Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See MRPL41 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MRPL41 SOURCE GeneReport for Unigene cluster: Hs.44017 UniProtKB/Swiss-Prot: RM41_HUMAN, Q8IXM3 Tissue specificity : Present in kidney, liver, thymus and testis, and at lower level in brain and spleen (at proteinlevel) SABiosciences Custom PCR Arrays for MRPL41 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MRPL41Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat MRPL41 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MRPL41 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MRPL41 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MRPL41
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Orthologsfor MRPL41 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for MRPL41 gene from 7/18 species (see all 18 ) About this table
ENSEMBL Gene Tree for MRPL41 (if available)TreeFam Gene Tree for MRPL41 (if available)
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Paralogsfor MRPL41 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor MRPL41 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 9 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MRPL41 (140445651 - 140447007 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for MRPL41: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MRPL41
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Disorders
/ Diseasesfor MRPL41 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MRPL41 for disorders About GeneDecksing
OMIM gene information: 611846
OMIM disorders : --2 diseases for MRPL41 : About MalaCards duodenogastric reflux breast cancer Human Genome Epidemiology (HuGE) Navigator: MRPL41 (1 document)Export disorders for MRPL41 gene to outside databases
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Publicationsfor MRPL41 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MRPL41 gene, integrated from 9 sources (see all 22 ): (articles sorted by number of sources associating them with MRPL41) Utopia : connect your pdf to the dynamic world of online information
The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders. (PubMed id 11543634) 1 , 2 , 3 Kenmochi N....Tanaka T. (2001) BMRP is a Bcl-2 binding protein that induces apoptosis. (PubMed id 15547950) 1 , 2 , 9 Chintharlapalli S.R.... Gonzalez-Garcia M. (2005) Mitochondrial ribosomal protein L41 mediates serum starvation-induced cell-cycle arrest through an increase of p21(WAF1/CIP1). (PubMed id 16256947) 1 , 2 , 9 Kim M.J.... Yoo Y.D. (2005) Mitochondrial ribosomal protein L41 suppresses cell growth in association with p53 and p27Kip1. (PubMed id 16024796) 1 , 2 Yoo Y.A.... Yoo Y.D. (2005) DNA sequence and analysis of human chromosome 9. (PubMed id 15164053) 1 , 2 Humphray S.J.... Dunham I. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) The large subunit of the mammalian mitochondrial ribosome. Analysis of the complement of ribosomal proteins present. (PubMed id 11551941) 1 , 2 Koc E.C....Spremulli L.L. (2001) A census of human soluble protein complexes. (PubMed id 22939629) 1 Havugimana P.C....Emili A. (2012) Identification of a motif in BMRP required for interac tion with Bcl-2 by site-directed mutagenesis studies. (PubMed id 22711503) 1 Conde J.A....Gonzalez-Garcia M. (2012) Initial characterization of the human central proteome. (PubMed id 21269460) 2 Burkard T.R.... Colinge J. (2011)
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External Searches for MRPL41 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MRPL41 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MRPL41 gene
(According to HUGE )
About This Section --
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Specialized Databases showing MRPL41 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for MRPL41 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for MRPL41 gene: Search GeneIP for patents involving MRPL41 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MRPL41 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for MRPL41 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MRPL41 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MRPL41 OriGene Protein Over-expression Lysate for MRPL41 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for MRPL41 OriGene 3'-UTR Clone for MRPL41 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MRPL41 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MRPL41 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for MRPL41 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MRPL41 OriGene Custom Protein Services for MRPL41 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MRPL41 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MRPL41 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MRPL41 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MRPL41 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MRPL41 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MRPL41
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MRPL41 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MRPL41
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MRPL41
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Aliases for MRPL41
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Expression for MRPL41
Function for MRPL41
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