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Aliases for MRPL41 Gene

Aliases for MRPL41 Gene

  • Mitochondrial Ribosomal Protein L41 2 3 5
  • Bcl-2-Interacting Mitochondrial Ribosomal Protein L41 3 4
  • Cell Proliferation-Inducing Gene 3 Protein 3 4
  • 39S Ribosomal Protein L27 Homolog 3 4
  • MRP-L27 Homolog 3 4
  • MRP-L41 3 4
  • MRPL27 3 4
  • RPML27 3 4
  • L41mt 3 4
  • BMRP 3 4
  • Proliferation-Inducing Gene 3 3
  • MRP-L27 3
  • PIG3 3

External Ids for MRPL41 Gene

Previous GeneCards Identifiers for MRPL41 Gene

  • GC09P131796
  • GC09M132098
  • GC09P133748
  • GC09P135664
  • GC09P137722
  • GC09P139565
  • GC09P140445
  • GC09P109910

Summaries for MRPL41 Gene

Entrez Gene Summary for MRPL41 Gene

  • Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein that belongs to the YmL27 ribosomal protein family. [provided by RefSeq, Jul 2008]

GeneCards Summary for MRPL41 Gene

MRPL41 (Mitochondrial Ribosomal Protein L41) is a Protein Coding gene. Among its related pathways are Mitochondrial translation and Organelle biogenesis and maintenance. GO annotations related to this gene include poly(A) RNA binding and structural constituent of ribosome.

UniProtKB/Swiss-Prot for MRPL41 Gene

  • Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle. Enhances p53/TP53 stability, thereby contributing to p53/TP53-induced apoptosis in response to growth-inhibitory condition. Enhances p53/TP53 translocation to the mitochondria. Has the ability to arrest the cell cycle at the G1 phase, possibly by stabilizing the CDKN1A and CDKN1B (p27Kip1) proteins.

Gene Wiki entry for MRPL41 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPL41 Gene

Genomics for MRPL41 Gene

Regulatory Elements for MRPL41 Gene

Enhancers for MRPL41 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MRPL41 on UCSC Golden Path with GeneCards custom track

Promoters for MRPL41 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MRPL41 on UCSC Golden Path with GeneCards custom track

Genomic Location for MRPL41 Gene

Chromosome:
9
Start:
137,551,199 bp from pter
End:
137,552,555 bp from pter
Size:
1,357 bases
Orientation:
Plus strand

Genomic View for MRPL41 Gene

Genes around MRPL41 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL41 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL41 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL41 Gene

Proteins for MRPL41 Gene

  • Protein details for MRPL41 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IXM3-RM41_HUMAN
    Recommended name:
    39S ribosomal protein L41, mitochondrial
    Protein Accession:
    Q8IXM3
    Secondary Accessions:
    • Q96Q49

    Protein attributes for MRPL41 Gene

    Size:
    137 amino acids
    Molecular mass:
    15383 Da
    Quaternary structure:
    • Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins. Interacts with BCL2.

    Three dimensional structures from OCA and Proteopedia for MRPL41 Gene

neXtProt entry for MRPL41 Gene

Proteomics data for MRPL41 Gene at MOPED

Post-translational modifications for MRPL41 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for MRPL41 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for MRPL41 Gene

Domains & Families for MRPL41 Gene

Gene Families for MRPL41 Gene

Protein Domains for MRPL41 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for MRPL41 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IXM3

UniProtKB/Swiss-Prot:

RM41_HUMAN :
  • Belongs to the ribosomal protein L41 family.
Family:
  • Belongs to the ribosomal protein L41 family.
genes like me logo Genes that share domains with MRPL41: view

Function for MRPL41 Gene

Molecular function for MRPL41 Gene

UniProtKB/Swiss-Prot Function:
Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle. Enhances p53/TP53 stability, thereby contributing to p53/TP53-induced apoptosis in response to growth-inhibitory condition. Enhances p53/TP53 translocation to the mitochondria. Has the ability to arrest the cell cycle at the G1 phase, possibly by stabilizing the CDKN1A and CDKN1B (p27Kip1) proteins.

Phenotypes for MRPL41 Gene

GenomeRNAi human phenotypes for MRPL41:
genes like me logo Genes that share phenotypes with MRPL41: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MRPL41 Gene

Localization for MRPL41 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MRPL41 Gene

Mitochondrion.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MRPL41 Gene COMPARTMENTS Subcellular localization image for MRPL41 gene
Compartment Confidence
mitochondrion 5
extracellular 2
cytosol 1
endoplasmic reticulum 1
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for MRPL41 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IEA,IDA --
genes like me logo Genes that share ontologies with MRPL41: view

Pathways & Interactions for MRPL41 Gene

genes like me logo Genes that share pathways with MRPL41: view

Gene Ontology (GO) - Biological Process for MRPL41 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006412 translation IDA 16024796
GO:0006915 apoptotic process IEA --
GO:0032543 mitochondrial translation TAS --
genes like me logo Genes that share ontologies with MRPL41: view

No data available for SIGNOR curated interactions for MRPL41 Gene

Drugs & Compounds for MRPL41 Gene

No Compound Related Data Available

Transcripts for MRPL41 Gene

mRNA/cDNA for MRPL41 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(443) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRPL41 Gene

Mitochondrial ribosomal protein L41:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL41 Gene

No ASD Table

Relevant External Links for MRPL41 Gene

GeneLoc Exon Structure for
MRPL41
ECgene alternative splicing isoforms for
MRPL41

Expression for MRPL41 Gene

mRNA expression in normal human tissues for MRPL41 Gene

Protein differential expression in normal tissues from HIPED for MRPL41 Gene

This gene is overexpressed in Lung (26.9) and Bone (16.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for MRPL41 Gene



SOURCE GeneReport for Unigene cluster for MRPL41 Gene Hs.44017

mRNA Expression by UniProt/SwissProt for MRPL41 Gene

Q8IXM3-RM41_HUMAN
Tissue specificity: Present in kidney, liver, thymus and testis, and at lower level in brain and spleen (at protein level).
genes like me logo Genes that share expression patterns with MRPL41: view

Protein tissue co-expression partners for MRPL41 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA differential expression in normal tissues for MRPL41 Gene

Orthologs for MRPL41 Gene

This gene was present in the common ancestor of animals.

Orthologs for MRPL41 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia MRPL41 35
  • 79.51 (n)
  • 75.56 (a)
MRPL41 36
  • 76 (a)
OneToOne
dog
(Canis familiaris)
Mammalia MRPL41 35
  • 81.92 (n)
  • 72.88 (a)
MRPL41 36
  • 74 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mrpl41 35
  • 73.83 (n)
  • 77.04 (a)
Mrpl41 16
Gm6434 36
  • 77 (a)
OneToMany
Mrpl41 36
  • 77 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia MRPL41 35
  • 99.51 (n)
  • 100 (a)
MRPL41 36
  • 100 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Mrpl41 35
  • 73.63 (n)
  • 77.61 (a)
oppossum
(Monodelphis domestica)
Mammalia MRPL41 36
  • 78 (a)
OneToOne
chicken
(Gallus gallus)
Aves MRPL41 35
  • 76.54 (n)
  • 73.33 (a)
MRPL41 36
  • 73 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia mrpl41 35
  • 66.91 (n)
  • 63.7 (a)
Str.1501 35
African clawed frog
(Xenopus laevis)
Amphibia Xl.6809 35
zebrafish
(Danio rerio)
Actinopterygii mrpl41 35
  • 63.21 (n)
  • 60 (a)
mrpl41 36
  • 61 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta mRpL41 36
  • 27 (a)
OneToOne
Species with no ortholog for MRPL41:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MRPL41 Gene

ENSEMBL:
Gene Tree for MRPL41 (if available)
TreeFam:
Gene Tree for MRPL41 (if available)

Paralogs for MRPL41 Gene

No data available for Paralogs for MRPL41 Gene

Variants for MRPL41 Gene

Sequence variations from dbSNP and Humsavar for MRPL41 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs568535559 -- 137,552,937(+) CTAGG(A/C)AAATT downstream-variant-500B
rs548344820 -- 137,552,925(+) ACTGC(C/G)CCCAG downstream-variant-500B
rs769193281 -- 137,553,046(+) GCACA(C/T)TGGGA downstream-variant-500B
rs531859998 -- 137,552,921(+) AGCCA(C/T)TGCGC downstream-variant-500B
rs188979859 -- 137,553,038(+) TAATC(A/C)CAGCA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MRPL41 Gene

Variant ID Type Subtype PubMed ID
nsv894387 CNV Gain 21882294
dgv8412n71 CNV Loss 21882294
dgv8416n71 CNV Loss 21882294
dgv8423n71 CNV Loss 21882294
nsv894502 CNV Loss 21882294
nsv831762 CNV Loss 17160897
nsv894663 CNV Loss 21882294
nsv831763 CNV Loss 17160897
nsv894664 CNV Loss 21882294

Variation tolerance for MRPL41 Gene

Residual Variation Intolerance Score: 47.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.71; 15.10% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MRPL41 Gene

HapMap Linkage Disequilibrium report
MRPL41

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MRPL41 Gene

Disorders for MRPL41 Gene

Relevant External Links for MRPL41

Genetic Association Database (GAD)
MRPL41
Human Genome Epidemiology (HuGE) Navigator
MRPL41
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MRPL41

No disorders were found for MRPL41 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL41 Gene

Publications for MRPL41 Gene

  1. The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders. (PMID: 11543634) Kenmochi N. … Tanaka T. (Genomics 2001) 2 3 4 67
  2. BMRP is a Bcl-2 binding protein that induces apoptosis. (PMID: 15547950) Chintharlapalli S.R. … Gonzalez-Garcia M. (J. Cell. Biochem. 2005) 3 23
  3. Mitochondrial ribosomal protein L41 mediates serum starvation-induced cell-cycle arrest through an increase of p21(WAF1/CIP1). (PMID: 16256947) Kim M.J. … Yoo Y.D. (Biochem. Biophys. Res. Commun. 2005) 3 23
  4. BioID-based Identification of Skp Cullin F-box (SCF)I^-TrCP1/2 E3 Ligase Substrates. (PMID: 25900982) Coyaud E. … Raught B. (Mol. Cell Proteomics 2015) 3
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3

Products for MRPL41 Gene

Sources for MRPL41 Gene

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