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MRPL32 Gene

protein-coding   GIFtS: 53
GCID: GC07P042971

Mitochondrial Ribosomal Protein L32

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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Mitochondrial Ribosomal Protein L321 2
L32mt2 3
MRP-L322 3
39S Ribosomal Protein L32, Mitochondrial2
bMRP-59b2

External Ids:    HGNC: 140351   Entrez Gene: 649832   Ensembl: ENSG000001065917   OMIM: 6118395   UniProtKB: Q9BYC83   

Export aliases for MRPL32 gene to outside databases

Previous GC identifers: GC07P042618 GC07P042712 GC07P042745 GC07P042938


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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Entrez Gene summary for MRPL32 Gene:
Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the
mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit.
They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is
reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain
a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and
sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a
39S subunit protein that belongs to the L32 ribosomal protein family. A pseudogene corresponding to this gene is
found on chromosome Xp. (provided by RefSeq, Jul 2008)

GeneCards Summary for MRPL32 Gene:
MRPL32 (mitochondrial ribosomal protein L32) is a protein-coding gene. GO annotations related to this gene include structural constituent of ribosome.

Gene Wiki entry for MRPL32 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000007.13  NT_007819.18  NC_018918.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the MRPL32 gene promoter:
         AREB6   AP-2rep   MEF-2A   AML1a   aMEF-2   POU3F2   FOXL1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): MRPL32 promoter sequence
   Search Chromatin IP Primers for MRPL32

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat MRPL32


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7p14   Ensembl cytogenetic band:  7p14.1   HGNC cytogenetic band: 7p14

MRPL32 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MRPL32 gene location

GeneLoc information about chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07P042971:  view genomic region     (about GC identifiers)

Start:
42,971,799 bp from pter      End:
42,988,557 bp from pter
Size:
16,759 bases      Orientation:
plus strand

1 alternative location:
Chr7+,CRA_TCAG 43,011,437-43,016,951     

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., eBioscience, and/or antibodies-online,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., eBioscience, and/or antibodies-online, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, Cloud-Clone Corp, antibodies-online, and/or others.)
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UniProtKB/Swiss-Prot: RM32_HUMAN, Q9BYC8 (See protein sequence)
Recommended Name: 39S ribosomal protein L32, mitochondrial precursor  
Size: 188 amino acids; 21405 Da
Secondary accessions: Q96Q68 Q9P098

Explore the universe of human proteins at neXtProt for MRPL32: NX_Q9BYC8

Explore proteomics data for MRPL32 at MOPED


See MRPL32 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

REFSEQ proteins: NP_114109.1  
ENSEMBL proteins: 
 ENSP00000223324   ENSP00000415581   ENSP00000391562  

MRPL32 Human Recombinant Protein Products:

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antibodies-online peptides for MRPL32

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antibodies-online antibodies for MRPL32 (13 products) 

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antibodies-online kits for MRPL32 (3 products) 


(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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HGNC Gene Families:
MRPL: Mitochondrial ribosomal proteins / large subunits

2 InterPro protein domains:
 IPR011332 Ribosomal_zn-bd
 IPR002677 Ribosomal_L32p

Graphical View of Domain Structure for InterPro Entry Q9BYC8

ProtoNet protein and cluster: Q9BYC8

1 Blocks protein domain: IPB002677 Ribosomal L32p protein

UniProtKB/Swiss-Prot: RM32_HUMAN, Q9BYC8
Similarity: Belongs to the ribosomal protein L32P family


Find genes that share domains with MRPL32           About GenesLikeMe


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, genOway,
transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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     Gene Ontology (GO): 2 molecular function terms:    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0003735structural constituent of ribosome NAS11543634
GO:0044822poly(A) RNA binding IDA--
     
Find genes that share ontologies with MRPL32           About GenesLikeMe


Animal Models:
   genOway: Develop your customized and physiologically relevant rodent model for MRPL32

miRNA
Products:
    
miRTarBase miRNAs that target MRPL32:
hsa-mir-19b-3p (MIRT050634), hsa-mir-92a-3p (MIRT048973), hsa-mir-193b-3p (MIRT041262)

Block miRNA regulation of human, mouse, rat MRPL32 using miScript Target Protectors
Search for qRT-PCR Assays for microRNAs that regulate MRPL32
SwitchGear 3'UTR luciferase reporter plasmidMRPL32 3' UTR sequence
Inhib. RNA
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Predesigned siRNA for gene silencing in human, mouse, rat MRPL32

Gene Editing
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GenScript: all cDNA clones in your preferred vector: MRPL32 (NM_031903)
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Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat MRPL32

Cell Line
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(According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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Subcellular locations from UniProtKB/Swiss-Prot
RM32_HUMAN, Q9BYC8: Mitochondrion
Subcellular locations from COMPARTMENTS: 

CompartmentConfidence
mitochondrion5
extracellular3
peroxisome1

Gene Ontology (GO): 3 cellular component terms:    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005761mitochondrial ribosome NAS11543634
GO:0005840ribosome ----
GO:0015934large ribosomal subunit IEA--

Find genes that share ontologies with MRPL32           About GenesLikeMe


(SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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SuperPaths for MRPL32 About    
See pathways by source

SuperPathContained pathways About
1CFTR translational fidelity class I mutations
Ribosome0.54


Find genes that share SuperPaths with MRPL32           About GenesLikeMe

Pathways by source                                                                                                                                                                 See SuperPaths
Show all pathways



1 Kegg Pathway  (Kegg details for MRPL32):
    Ribosome

    Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for MRPL32
Interactions:

    Search GeneGlobe Interaction Network for MRPL32

STRING Interaction Network Preview (showing 5 interactants - click image to see 9)

Selected Interacting proteins for MRPL32 (Q9BYC82, 3 ENSP000002233244) via UniProtKB, MINT, STRING, and/or I2D (see all 248)
InteractantInteraction Details
GeneCardExternal ID(s)
ICT1Q141972, 3, ENSP000003015854MINT-8079030 I2D: score=1 STRING: ENSP00000301585
MRPL40Q9NQ502, ENSP000003334014MINT-8079030 STRING: ENSP00000333401
AFG3L2Q9Y4W62, ENSP000002691434MINT-8079030 STRING: ENSP00000269143
MRPL27Q9P0M92, ENSP000002259694MINT-8079030 STRING: ENSP00000225969
AARS2Q5JTZ92MINT-8079030
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Gene Ontology (GO): 1 biological process term:    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0006412translation NAS11543634

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(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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Browse Small Molecules at EMD Millipore
   Browse drugs & compounds from Enzo Life Sciences
  Browse compounds at ApexBio 

Browse Tocris compounds for MRPL32 (RM32)



(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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REFSEQ mRNAs for MRPL32 gene: 
NM_031903.2  

Unigene Cluster for MRPL32:

Mitochondrial ribosomal protein L32
Hs.50252  [show with all ESTs]
Unigene Representative Sequence: AK090551
4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000223324(uc003tia.3) ENST00000432845(uc003tib.3) ENST00000413995
ENST00000496564
miRNA
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Primer
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OriGene qPCR primer pairs and template standards for MRPL32
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  QuantiFast Probe-based Assays in human, mouse, rat MRPL32

Additional mRNA sequence: 

AB049649.1 AF161401.1 AK090551.1 AK313393.1 BC013147.1 

8 DOTS entries:

DT.453357  DT.100818090  DT.100801495  DT.100818088  DT.95248419  DT.213526  DT.121091212  DT.95328466 

Selected AceView cDNA sequences (see all 170):

AA354801 AA371238 BI521527 AA166925 BM701372 CR593442 CR599793 BM848494 
AA308008 AB049649 CB118365 BC013147 AI075720 BM704002 CD364568 BI793057 
BM852672 AI054163 BM855129 BU928098 CD364734 AA504475 CD677330 AL551803 

GeneLoc Exon Structure

4 Alternative Splicing Database (ASD) splice patterns (SP) for MRPL32    About this scheme

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4a · 4b · 4c
SP1:                          -     -                     
SP2:                          -     -                     
SP3:                                                      
SP4:                                                      


ECgene alternative splicing isoforms for MRPL32

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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MRPL32 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>2/3
CGAP TAG: TCCTTTGTGC
MRPL32 Expression
About this image

MRPL32 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

MRPL32 Protein Expression

SOURCE GeneReport for Unigene cluster: Hs.50252
    Custom PCR Arrays for MRPL32
Primer
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In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MRPL32

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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This gene was present in the common ancestor of animals.

Orthologs for MRPL32 gene from Selected species (see all 14)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
mouse
(Mus musculus)
Mammalia Mrpl321 , 5 mitochondrial ribosomal protein L321, 5 79.32(n)1
72.73(a)1
  13 (5.36 cM)5
753981  NM_029271.21  NP_083547.11 
 146103015 
chicken
(Gallus gallus)
Aves MRPL321 mitochondrial ribosomal protein L32 62.68(n)
60.87(a)
  420773  XM_418869.4  XP_418869.1 
lizard
(Anolis carolinensis)
Reptilia MRPL326
mitochondrial ribosomal protein L32
65(a)
1 ↔ 1
6(50532163-50544542)
African clawed frog
(Xenopus laevis)
Amphibia Xl.79712 Xenopus laevis transcribed sequence with weak similarity more 74.27(n)    48054696 
zebrafish
(Danio rerio)
Actinopterygii Dr.199232 Transcribed sequence with weak similarity to protein more 75.87(n)    BU710305.1 
fruit fly
(Drosophila melanogaster)
Insecta mRpL326
mitochondrial ribosomal protein L32
28(a)
1 ↔ 1
3R(27078603-27079408)
worm
(Caenorhabditis elegans)
Secernentea mrpl-326
Protein MRPL-32 (mrpl-32) mRNA, complete cds
25(a)
1 ↔ 1
III(8449757-8450510) WBGene00016249


ENSEMBL Gene Tree for MRPL32 (if available)
TreeFam Gene Tree for MRPL32 (if available)

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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Paralogs for MRPL32 gene

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2 Pseudogenes.org Pseudogenes for MRPL32
PGOHUM00000241288 PGOHUM00000241786


(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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Selected SNPs for MRPL32 (see all 98)    About this table                                 

Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 7 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs20331701,2
C--42973815(+) TGAGCC/TGAGGT 1 -- int12Minor allele frequency- T:0.00NA 4
rs1458938101,2
C--42973867(+) GTCTC-/AAAAAAA 1 -- int10--------
rs30287631,2
C--42973882(+) aaaaa-/A/AA  
        
GTATG
1 -- int11NA 2
rs1140157791,2
C,F--42973902(+) AAGAAA/GTAGCA 1 -- int11Minor allele frequency- G:0.01WA 118
rs1441031671,2
--42974264(+) GTTAGA/GTGCCT 1 -- int10--------
rs5988101,2
C,F,H--42974340(+) GATCCA/GCTAAG 1 -- int125Minor allele frequency- G:0.10NS EA NA WA CSA 1039
rs747427581,2
F--42974447(+) AGTTTT/GTGTGT 1 -- int11Minor allele frequency- G:0.04WA 118
rs1842282071,2
--42974461(+) TGTATC/GTTTGA 1 -- int10--------
rs771698241,2
C--42974531(+) TCTGTA/GTCTCT 1 -- int11Minor allele frequency- G:0.01WA 118
rs2007924081,2
--42974610(+) ATACCA/CGTGGA 2 S R mis10--------

HapMap Linkage Disequilibrium report for MRPL32 (42971799 - 42988557 bp)

Structural Variations
     Database of Genomic Variants (DGV) 1 variation for MRPL32:    About this table    
Variant IDTypeSubtypePubMed ID
nsv830979CNV Gain17160897

Site Specific Mutation Identification with PCR Assays
Search QIAGEN SeqTarget long-range PCR primers for resequencing MRPL32
DNA2.0 Custom Variant and Variant Library Synthesis for MRPL32

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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OMIM gene information: 611839    OMIM disorders: --


Find genes that share disorders with MRPL32           About GenesLikeMe

Genetic Association Database (GAD): MRPL32
Human Genome Epidemiology (HuGE) Navigator: MRPL32 (1 document)

Export disorders for MRPL32 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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PubMed articles for MRPL32 gene, integrated from 10 sources (see all 18):
(articles sorted by number of sources associating them with MRPL32)
    Utopia: connect your pdf to the dynamic
world of online information

  1. The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders. (PubMed id 11543634)1, 2, 3 Kenmochi N.... Tanaka T. (Genomics 2001)
  2. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PubMed id 20877624)1, 4 Hendrickson S.L....O'Brien S.J. (PLoS ONE 2010)
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
  4. Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome. Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria. (PubMed id 11279069)1, 2 Suzuki T....Watanabe K. (J. Biol. Chem. 2001)
  5. Pathway Analysis of ChIP-Seq-Based NRF1 Target Genes Suggests a Logical Hypothesis of their Involvement in the Pathogenesis of Neurodegenerative Diseases. (PubMed id 24250222)1 Satoh J....Yamamoto Y. (Gene Regul Syst Bio 2013)
  6. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (Cell 2012)
  7. Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (BMC Syst. Biol. 2011)
  8. A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into the human mitochondrial ribosome. (PubMed id 20186120)1 Richter R....Chrzanowska-Lightowlers Z.M. (EMBO J. 2010)
  9. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PubMed id 17207965)1 Lamesch P.... Vidal M. (Genomics 2007)
  10. Transcriptome analysis of human gastric cancer. (PubMed id 16341674)1 Oh J.H.... Kim N.S. (Mamm. Genome 2005)

(in PubMed, OMIM, and NCBI Bookshelf)
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 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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Entrez Gene: 64983 HGNC: 14035 AceView: MRPL32 Ensembl:ENSG00000106591 euGenes: HUgn64983
ECgene: MRPL32 Kegg: 64983 H-InvDB: MRPL32

(According to HUGE)
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  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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NameDescription
PharmGKB entry for MRPL32 Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
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Patent Information for MRPL32 gene:
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(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, eBioscience, antibodies-online, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from genOway)
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