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Aliases for MRPL23-AS1 Gene

Subcategory (RNA class) for MRPL23-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MRPL23-AS1 Gene

  • MRPL23 Antisense RNA 1 2 3 5
  • MRPL23 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MRPL23-AS1 Gene

Previous GeneCards Identifiers for MRPL23-AS1 Gene

  • GC11M002006

Summaries for MRPL23-AS1 Gene

GeneCards Summary for MRPL23-AS1 Gene

MRPL23-AS1 (MRPL23 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MRPL23-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPL23-AS1 Gene

Genomics for MRPL23-AS1 Gene

GeneHancer (GH) Regulatory Elements for MRPL23-AS1 Gene

Promoters and enhancers for MRPL23-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I001985 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 20.7 -2.6 -2646 14.6 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B DMAP1 SLC30A9 PAF1 SP5 LINC01219 H19 MRPL23-AS1 IGF2 TSPAN32 SYT8 ENSG00000274866 ENSG00000275266 MIR675 GC11P001986
GH11I001946 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 21.2 +37.1 37082 13.2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 POLR2B ZNF207 ZNF143 MRPL23 MRPL23-AS1 GC11P001949 GC11P001973
GH11I001962 Enhancer 2 VISTA FANTOM5 Ensembl ENCODE dbSUPER 17.7 +22.3 22329 10.2 HDGF PKNOX1 ZFP64 ARID4B DMAP1 ZNF48 ZNF121 GLIS2 SP5 MIER2 MRPL23-AS1 IGF2 TH TNNI2 TNNT3 TSSC4 SYT8 GC11P001973 GC11P001949 MRPL23
GH11I001977 Enhancer 1.2 ENCODE dbSUPER 16.6 +8.9 8888 7.5 PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B DMAP1 SP5 NFYC ZHX2 MRPL23-AS1 LSP1 KRTAP5-6 FAM99B LOC100505570 GC11P001973 GC11P001986 MRPL23
GH11I001916 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 8.7 +65.3 65297 16.5 CTCF KLF1 ZNF449 YBX1 EBF1 NFXL1 IRF4 RAD21 ZFHX2 ZNF366 TNNT3 MRPL23-AS1 LINC01150 MRPL23
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MRPL23-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MRPL23-AS1 Gene

Genomic Locations for MRPL23-AS1 Gene
chr11:1,983,209-1,989,920
(GRCh38/hg38)
Size:
6,712 bases
Orientation:
Minus strand
chr11:2,004,439-2,011,150
(GRCh37/hg19)

Genomic View for MRPL23-AS1 Gene

Genes around MRPL23-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL23-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL23-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL23-AS1 Gene

Proteins for MRPL23-AS1 Gene

Post-translational modifications for MRPL23-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL23-AS1 Gene

Domains & Families for MRPL23-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPL23-AS1 Gene

Function for MRPL23-AS1 Gene

Phenotypes From GWAS Catalog for MRPL23-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL23-AS1 Gene

Localization for MRPL23-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPL23-AS1 Gene

Pathways & Interactions for MRPL23-AS1 Gene

SuperPathways for MRPL23-AS1 Gene

No Data Available

Interacting Proteins for MRPL23-AS1 Gene

Gene Ontology (GO) - Biological Process for MRPL23-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPL23-AS1 Gene

Drugs & Compounds for MRPL23-AS1 Gene

No Compound Related Data Available

Transcripts for MRPL23-AS1 Gene

mRNA/cDNA for MRPL23-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRPL23-AS1 Gene

MRPL23 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL23-AS1 Gene

No ASD Table

Relevant External Links for MRPL23-AS1 Gene

GeneLoc Exon Structure for
MRPL23-AS1
ECgene alternative splicing isoforms for
MRPL23-AS1

Expression for MRPL23-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRPL23-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MRPL23-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x5.2).

SOURCE GeneReport for Unigene cluster for MRPL23-AS1 Gene:

Hs.677620
genes like me logo Genes that share expression patterns with MRPL23-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPL23-AS1 Gene

Orthologs for MRPL23-AS1 Gene

Evolution for MRPL23-AS1 Gene

ENSEMBL:
Gene Tree for MRPL23-AS1 (if available)
TreeFam:
Gene Tree for MRPL23-AS1 (if available)

No data available for Orthologs for MRPL23-AS1 Gene

Paralogs for MRPL23-AS1 Gene

No data available for Paralogs for MRPL23-AS1 Gene

Variants for MRPL23-AS1 Gene

Sequence variations from dbSNP and Humsavar for MRPL23-AS1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000219167 -- 1,986,402(-) T/G intron_variant
rs1001064928 -- 1,986,879(-) G/A intron_variant
rs1001433769 -- 1,986,671(-) T/C intron_variant
rs1002041284 -- 1,987,957(-) G/T intron_variant
rs1002507435 -- 1,984,493(-) T/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MRPL23-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1015n100 CNV gain 25217958
dgv1016n100 CNV gain 25217958
esv29980 CNV loss 17803354
nsv1047474 CNV gain 25217958
nsv467645 CNV gain 19166990
nsv469926 CNV loss 18288195
nsv516622 CNV loss 19592680
nsv522320 CNV loss 19592680
nsv553047 CNV gain 21841781
nsv553064 CNV loss 21841781
nsv951283 CNV deletion 24416366

Additional Variant Information for MRPL23-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL23-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRPL23-AS1 Gene

Disorders for MRPL23-AS1 Gene

Additional Disease Information for MRPL23-AS1

No disorders were found for MRPL23-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL23-AS1 Gene

Publications for MRPL23-AS1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for MRPL23-AS1 Gene

Sources for MRPL23-AS1 Gene

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