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Aliases for MRPL20P1 Gene

Aliases for MRPL20P1 Gene

  • Mitochondrial Ribosomal Protein L20 Pseudogene 1 2 3 5

External Ids for MRPL20P1 Gene

Previous GeneCards Identifiers for MRPL20P1 Gene

  • GC21U900049
  • GC21P037287
  • GC21P037288
  • GC21P038366
  • GC21P023842

Summaries for MRPL20P1 Gene

GeneCards Summary for MRPL20P1 Gene

MRPL20P1 (Mitochondrial Ribosomal Protein L20 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPL20P1 Gene

Genomics for MRPL20P1 Gene

Regulatory Elements for MRPL20P1 Gene

Enhancers for MRPL20P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F036697 1.3 FANTOM5 ENCODE 16.2 -293.4 -293436 6.9 SIN3A GLI4 ZNF2 GLIS2 ZNF263 SP3 YY2 SP5 REST TSHZ1 SIM2 MRPL20P1 RN7SL678P LOC105369295 ENSG00000230794 ENSG00000242553 SETD4 PPP1R2P2 MORC3 ENSG00000224790
GH21F036539 1.2 Ensembl ENCODE 16.2 -453.3 -453301 4.0 HDGF TBP PKNOX1 WRNIP1 ZNF133 BMI1 RAD21 ZNF155 ZNF335 GLIS2 ENSG00000242553 MORC3 MRPL20P1 LOC105369295 RN7SL678P ENSG00000230794 TTC3 SETD4 PPP1R2P2 RIMKLBP1
GH21F037071 1.1 ENCODE 16.3 +78.6 78586 4.2 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF416 TTC3 PIGP ENSG00000242553 MORC3 SETD4 MRPL20P1 RN7SL678P DSCR4-IT1 ENSG00000224790 TTC3-AS1
GH21F036133 1 ENCODE 16.2 -859.2 -859162 2.9 HDGF SIN3A GLI4 ZNF2 ZNF121 GLIS2 ZNF416 KLF7 ZNF548 SP3 DOPEY2 MORC3 LOC105369295 ENSG00000230794 MRPL20P1 CBR3 RPL23AP3 PPP1R2P2 SETD4 ENSG00000224790
GH21F036564 0.9 ENCODE 16.2 -428.4 -428371 2.6 PKNOX1 FEZF1 ZNF121 SCRT2 ZNF280D OVOL3 ZNF645 ZEB2 ZNF488 ZNF518A MRPL20P1 LOC105369295 RN7SL678P ENSG00000230794 PPP1R2P2 CLDN14 PSMD4P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPL20P1 on UCSC Golden Path with GeneCards custom track

Promoters for MRPL20P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001840834 -57 200 ZBTB33
ENSR00001840835 342 201 CTCF ZBTB33 REST

Genomic Location for MRPL20P1 Gene

Chromosome:
21
Start:
36,994,558 bp from pter
End:
36,995,248 bp from pter
Size:
691 bases
Orientation:
Plus strand

Genomic View for MRPL20P1 Gene

Genes around MRPL20P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL20P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL20P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL20P1 Gene

Proteins for MRPL20P1 Gene

Post-translational modifications for MRPL20P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL20P1 Gene

Domains & Families for MRPL20P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPL20P1 Gene

Function for MRPL20P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL20P1 Gene

Localization for MRPL20P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRPL20P1 Gene

Pathways & Interactions for MRPL20P1 Gene

SuperPathways for MRPL20P1 Gene

No Data Available

Interacting Proteins for MRPL20P1 Gene

Gene Ontology (GO) - Biological Process for MRPL20P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPL20P1 Gene

Transcripts for MRPL20P1 Gene

mRNA/cDNA for MRPL20P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL20P1 Gene

No ASD Table

Relevant External Links for MRPL20P1 Gene

GeneLoc Exon Structure for
MRPL20P1
ECgene alternative splicing isoforms for
MRPL20P1

Expression for MRPL20P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRPL20P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPL20P1 Gene:

MRPL20P1
genes like me logo Genes that share expression patterns with MRPL20P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MRPL20P1 Gene

Orthologs for MRPL20P1 Gene

Evolution for MRPL20P1 Gene

ENSEMBL:
Gene Tree for MRPL20P1 (if available)
TreeFam:
Gene Tree for MRPL20P1 (if available)

No data available for Orthologs for MRPL20P1 Gene

Paralogs for MRPL20P1 Gene

No data available for Paralogs for MRPL20P1 Gene

Variants for MRPL20P1 Gene

Relevant External Links for MRPL20P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL20P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPL20P1 Gene

Disorders for MRPL20P1 Gene

No disorders were found for MRPL20P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MRPL20P1 Gene

Publications for MRPL20P1 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z. … Gerstein M. (Genomics 2003) 2 3 64

Products for MRPL20P1 Gene

Sources for MRPL20P1 Gene

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