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Aliases for MRPL10 Gene

Aliases for MRPL10 Gene

  • Mitochondrial Ribosomal Protein L10 2 3 5
  • Mitochondrial Large Ribosomal Subunit Protein UL10m 3 4
  • 39S Ribosomal Protein L10, Mitochondrial 2 3
  • 39S Ribosomal Protein L8, Mitochondrial 3 4
  • MRP-L10 3 4
  • MRP-L8 3 4
  • L10MT 3 4
  • MRPL8 3 4
  • RPML8 3 4
  • L8mt 3 4

External Ids for MRPL10 Gene

Previous GeneCards Identifiers for MRPL10 Gene

  • GC17M045606
  • GC17M048381
  • GC17M046242
  • GC17M046375
  • GC17M043255
  • GC17M045900
  • GC17M041269

Summaries for MRPL10 Gene

Entrez Gene Summary for MRPL10 Gene

  • Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. Sequence analysis identified three transcript variants that encode two different isoforms. A pseudogene corresponding to this gene is found on chromosome 5q. [provided by RefSeq, Nov 2010]

GeneCards Summary for MRPL10 Gene

MRPL10 (Mitochondrial Ribosomal Protein L10) is a Protein Coding gene. Among its related pathways are Mitochondrial translation and Viral mRNA Translation. GO annotations related to this gene include poly(A) RNA binding and structural constituent of ribosome.

Gene Wiki entry for MRPL10 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPL10 Gene

Genomics for MRPL10 Gene

Regulatory Elements for MRPL10 Gene

Enhancers for MRPL10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G047808 1.5 Ensembl ENCODE dbSUPER 14.4 +21.0 20966 3.4 PKNOX1 ATF1 FOXA2 ARNT ZFP64 SIN3A ZBTB7B TCF12 FOS ZNF202 OSBPL7 LRRC46 SCRN2 LRRC37A17P MRPL45P2 MRPL10 SKAP1 ENSG00000253347 SP2-AS1 KPNB1
GH17G047828 1.4 ENCODE dbSUPER 15 +1.2 1224 4.2 HDGF PKNOX1 FOXA2 MLX CREB3L1 AGO1 ARID4B SIN3A YBX1 DMAP1 LRRC46 SCRN2 MRPL45P2 MRPL10 OSBPL7 SKAP1 SP2 HOXB4 ENSG00000266601 PRR15L
GH17G047879 0.9 ENCODE dbSUPER 12.4 -47.7 -47669 0.2 SMARCE1 DPF2 REST ZBTB7A ZFHX2 EGR1 HDAC2 IKZF1 KDM1A PRDM10 MRPL10 LRRC46 SCRN2 OSBPL7 CDK5RAP3 PRR15L SP6 ENSG00000266821
GH17G047872 1.4 Ensembl ENCODE dbSUPER 6.5 -41.4 -41389 1.6 YBX3 YBX1 ZNF48 ETV6 THAP11 ZNF263 ZBTB2 CEBPB ELF4 ZEB2 SCRN2 SP2 OSBPL7 PRR15L LRRC46 HOXB4 ENSG00000266601 MRPL10 SP6 ENSG00000264243
GH17G047842 1.5 Ensembl ENCODE dbSUPER 5.9 -12.6 -12594 2.4 PKNOX1 WRNIP1 ARID4B SIN3A GLIS2 GATA2 ZNF143 ZNF263 REST ZNF579 SCRN2 OSBPL7 SKAP1 MRPL10 ENSG00000264243
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRPL10 on UCSC Golden Path with GeneCards custom track

Promoters for MRPL10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000095218 241 1001 HDGF PKNOX1 FOXA2 MLX CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2

Genomic Location for MRPL10 Gene

Chromosome:
17
Start:
47,823,272 bp from pter
End:
47,831,541 bp from pter
Size:
8,270 bases
Orientation:
Minus strand

Genomic View for MRPL10 Gene

Genes around MRPL10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL10 Gene

Proteins for MRPL10 Gene

  • Protein details for MRPL10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z7H8-RM10_HUMAN
    Recommended name:
    39S ribosomal protein L10, mitochondrial
    Protein Accession:
    Q7Z7H8
    Secondary Accessions:
    • A6NGJ4
    • Q96B80
    • Q96Q55

    Protein attributes for MRPL10 Gene

    Size:
    261 amino acids
    Molecular mass:
    29283 Da
    Quaternary structure:
    • Component of the mitochondrial large ribosomal subunit (mt-LSU). Mature mammalian 55S mitochondrial ribosomes consist of a small (28S) and a large (39S) subunit. The 28S small subunit contains a 12S ribosomal RNA (12S mt-rRNA) and 30 different proteins. The 39S large subunit contains a 16S rRNA (16S mt-rRNA), a copy of mitochondrial valine transfer RNA (mt-tRNA(Val)), which plays an integral structural role, and 52 different proteins. uL10m contributes a single cysteine residue to a zinc-binding site with mL66.

    Three dimensional structures from OCA and Proteopedia for MRPL10 Gene

    Alternative splice isoforms for MRPL10 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MRPL10 Gene

Post-translational modifications for MRPL10 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for MRPL10 Gene

No data available for DME Specific Peptides for MRPL10 Gene

Domains & Families for MRPL10 Gene

Gene Families for MRPL10 Gene

Protein Domains for MRPL10 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q7Z7H8

UniProtKB/Swiss-Prot:

RM10_HUMAN :
  • Belongs to the universal ribosomal protein uL10 family.
Family:
  • Belongs to the universal ribosomal protein uL10 family.
genes like me logo Genes that share domains with MRPL10: view

Function for MRPL10 Gene

Gene Ontology (GO) - Molecular Function for MRPL10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003723 RNA binding IDA 22681889
GO:0003735 structural constituent of ribosome IBA,ISS --
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with MRPL10: view

Phenotypes for MRPL10 Gene

GenomeRNAi human phenotypes for MRPL10:
genes like me logo Genes that share phenotypes with MRPL10: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MRPL10 Gene

Localization for MRPL10 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MRPL10 Gene

Mitochondrion.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MRPL10 gene
Compartment Confidence
mitochondrion 5
nucleus 5
peroxisome 2

Gene Ontology (GO) - Cellular Components for MRPL10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005654 nucleoplasm IDA --
GO:0005739 mitochondrion IDA --
GO:0005743 mitochondrial inner membrane TAS --
GO:0005762 mitochondrial large ribosomal subunit ISS --
genes like me logo Genes that share ontologies with MRPL10: view

Pathways & Interactions for MRPL10 Gene

genes like me logo Genes that share pathways with MRPL10: view

Gene Ontology (GO) - Biological Process for MRPL10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006412 translation ISS --
GO:0032543 mitochondrial translation IBA --
GO:0042254 ribosome biogenesis IEA --
GO:0070125 mitochondrial translational elongation TAS --
GO:0070126 mitochondrial translational termination TAS --
genes like me logo Genes that share ontologies with MRPL10: view

No data available for SIGNOR curated interactions for MRPL10 Gene

Drugs & Compounds for MRPL10 Gene

No Compound Related Data Available

Transcripts for MRPL10 Gene

Unigene Clusters for MRPL10 Gene

Mitochondrial ribosomal protein L10:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL10 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b ^ 4a · 4b ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c
SP1: - - - - -
SP2: - - - - - -
SP3: - -
SP4: - - - - -
SP5: -
SP6: - - -

Relevant External Links for MRPL10 Gene

GeneLoc Exon Structure for
MRPL10
ECgene alternative splicing isoforms for
MRPL10

Expression for MRPL10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRPL10 Gene

Protein differential expression in normal tissues from HIPED for MRPL10 Gene

This gene is overexpressed in Pancreas (28.0) and Bone (7.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for MRPL10 Gene



Protein tissue co-expression partners for MRPL10 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPL10 Gene:

MRPL10

SOURCE GeneReport for Unigene cluster for MRPL10 Gene:

Hs.347535

Evidence on tissue expression from TISSUES for MRPL10 Gene

  • Nervous system(4.7)
  • Skin(4.3)
  • Pancreas(4.2)
  • Lung(2.8)
genes like me logo Genes that share expression patterns with MRPL10: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPL10 Gene

Orthologs for MRPL10 Gene

This gene was present in the common ancestor of animals.

Orthologs for MRPL10 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MRPL10 34 35
  • 99.62 (n)
cow
(Bos Taurus)
Mammalia MRPL10 34 35
  • 87.74 (n)
dog
(Canis familiaris)
Mammalia MRPL10 34 35
  • 86.46 (n)
mouse
(Mus musculus)
Mammalia Mrpl10 34 16 35
  • 81.99 (n)
rat
(Rattus norvegicus)
Mammalia Mrpl10 34
  • 81.99 (n)
oppossum
(Monodelphis domestica)
Mammalia MRPL10 35
  • 67 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MRPL10 35
  • 67 (a)
OneToOne
chicken
(Gallus gallus)
Aves MRPL10 35 34
  • 60.51 (n)
OneToOne
lizard
(Anolis carolinensis)
Reptilia MRPL10 35
  • 52 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia mrpl10 34
  • 60.12 (n)
Str.1890 34
zebrafish
(Danio rerio)
Actinopterygii mrpl10 34 35
  • 55.19 (n)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.434 34
fruit fly
(Drosophila melanogaster)
Insecta mRpL10 34 35
  • 45.09 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009988 34
  • 42.15 (n)
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 26 (a)
OneToOne
Species where no ortholog for MRPL10 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MRPL10 Gene

ENSEMBL:
Gene Tree for MRPL10 (if available)
TreeFam:
Gene Tree for MRPL10 (if available)

Paralogs for MRPL10 Gene

Pseudogenes.org Pseudogenes for MRPL10 Gene

genes like me logo Genes that share paralogs with MRPL10: view

No data available for Paralogs for MRPL10 Gene

Variants for MRPL10 Gene

Sequence variations from dbSNP and Humsavar for MRPL10 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000162850 -- 47,832,104(+) GGGAA(A/G)TCAGC upstream-variant-2KB, reference, synonymous-codon
rs1000915323 -- 47,823,033(+) AAGTC(C/T)GAGAA downstream-variant-500B, upstream-variant-2KB
rs1001292335 -- 47,828,931(+) GAGAA(A/G)AAAAT intron-variant
rs1003140256 -- 47,832,569(+) CTGTA(A/G)TCCTA intron-variant, upstream-variant-2KB
rs1003257863 -- 47,831,953(+) GTTCC(C/T)CTCCC upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for MRPL10 Gene

Variant ID Type Subtype PubMed ID
dgv947e212 CNV loss 25503493
nsv517880 CNV loss 19592680
nsv518892 CNV loss 19592680

Variation tolerance for MRPL10 Gene

Residual Variation Intolerance Score: 46.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.94; 79.75% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MRPL10 Gene

Human Gene Mutation Database (HGMD)
MRPL10
SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MRPL10 Gene

Disorders for MRPL10 Gene

Relevant External Links for MRPL10

Genetic Association Database (GAD)
MRPL10
Human Genome Epidemiology (HuGE) Navigator
MRPL10
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MRPL10

No disorders were found for MRPL10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL10 Gene

Publications for MRPL10 Gene

  1. The large subunit of the mammalian mitochondrial ribosome. Analysis of the complement of ribosomal proteins present. (PMID: 11551941) Koc E.C. … Spremulli L.L. (J. Biol. Chem. 2001) 2 3 4 64
  2. Structure of the large ribosomal subunit from human mitochondria. (PMID: 25278503) Brown A. … Ramakrishnan V. (Science 2014) 3 4 64
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 64
  4. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 46 64
  5. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 3 46 64

Products for MRPL10 Gene

Sources for MRPL10 Gene

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