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Aliases for MROH7-TTC4 Gene

Subcategory (RNA class) for MROH7-TTC4 Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for MROH7-TTC4 Gene

  • MROH7-TTC4 Readthrough (NMD Candidate) 2 3 5
  • HEATR8-TTC4 Readthrough 3
  • HEATR8-TTC4 3

External Ids for MROH7-TTC4 Gene

Previous GeneCards Identifiers for MROH7-TTC4 Gene

  • GC01P055112

Summaries for MROH7-TTC4 Gene

Entrez Gene Summary for MROH7-TTC4 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring MROH7 (maestro heat-like repeat family member 7) and TTC4 (tetratricopeptide repeat domain 4) genes. Alternative splicing results in multiple transcript variants, which are candidates for nonsense-mediated mRNA decay (NMD) and are unlikely to produce protein products. [provided by RefSeq, Aug 2013]

GeneCards Summary for MROH7-TTC4 Gene

MROH7-TTC4 (MROH7-TTC4 Readthrough (NMD Candidate)) is an RNA Gene, and is affiliated with the ncRNA class. GO annotations related to this gene include binding. An important paralog of this gene is MROH7.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MROH7-TTC4 Gene

Genomics for MROH7-TTC4 Gene

Regulatory Elements for MROH7-TTC4 Gene

Enhancers for MROH7-TTC4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F054648 0.6 ENCODE 0.4 +8.0 7957 2.1 ARID4B THRB RAD21 RARA YY1 ZNF366 CREM MIXL1 SP5 MIER2 ENSG00000237453 TTC22 MROH7 GC01M054645 MROH7-TTC4
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MROH7-TTC4 on UCSC Golden Path with GeneCards custom track

Genomic Location for MROH7-TTC4 Gene

Chromosome:
1
Start:
54,641,740 bp from pter
End:
54,742,657 bp from pter
Size:
100,918 bases
Orientation:
Plus strand

Genomic View for MROH7-TTC4 Gene

Genes around MROH7-TTC4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MROH7-TTC4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MROH7-TTC4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MROH7-TTC4 Gene

Proteins for MROH7-TTC4 Gene

  • Protein details for MROH7-TTC4 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A0MT08
    Recommended name:
    Protein MROH7-TTC4
    Protein Accession:
    A0A0A0MT08

    Protein attributes for MROH7-TTC4 Gene

    Size:
    1334 amino acids
    Molecular mass:
    147102 Da
    Quaternary structure:
    No Data Available
  • Protein details for MROH7-TTC4 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    F8WC02
    Recommended name:
    Protein MROH7-TTC4
    Protein Accession:
    F8WC02

    Protein attributes for MROH7-TTC4 Gene

    Size:
    652 amino acids
    Molecular mass:
    69240 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MROH7-TTC4 Gene

Post-translational modifications for MROH7-TTC4 Gene

No Post-translational modifications

Other Protein References for MROH7-TTC4 Gene

No data available for DME Specific Peptides for MROH7-TTC4 Gene

Domains & Families for MROH7-TTC4 Gene

Protein Domains for MROH7-TTC4 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MROH7-TTC4: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MROH7-TTC4 Gene

Function for MROH7-TTC4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MROH7-TTC4 Gene

Localization for MROH7-TTC4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MROH7-TTC4 Gene

Pathways & Interactions for MROH7-TTC4 Gene

SuperPathways for MROH7-TTC4 Gene

No Data Available

Interacting Proteins for MROH7-TTC4 Gene

Gene Ontology (GO) - Biological Process for MROH7-TTC4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MROH7-TTC4 Gene

Transcripts for MROH7-TTC4 Gene

mRNA/cDNA for MROH7-TTC4 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MROH7-TTC4 Gene

No ASD Table

Relevant External Links for MROH7-TTC4 Gene

GeneLoc Exon Structure for
MROH7-TTC4
ECgene alternative splicing isoforms for
MROH7-TTC4

Expression for MROH7-TTC4 Gene

mRNA expression in normal human tissues for MROH7-TTC4 Gene

mRNA differential expression in normal tissues according to GTEx for MROH7-TTC4 Gene

This gene is overexpressed in Pituitary (x5.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for MROH7-TTC4 Gene



Protein tissue co-expression partners for MROH7-TTC4 Gene

- Elite partner
genes like me logo Genes that share expression patterns with MROH7-TTC4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for MROH7-TTC4 Gene

Orthologs for MROH7-TTC4 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MROH7-TTC4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 93 (a)
OneToMany
cow
(Bos Taurus)
Mammalia HEATR8 35
  • 79 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Mroh7 35
  • 68 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 35
  • 58 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 43 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 24 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 35 (a)
OneToMany
Species where no ortholog for MROH7-TTC4 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MROH7-TTC4 Gene

ENSEMBL:
Gene Tree for MROH7-TTC4 (if available)
TreeFam:
Gene Tree for MROH7-TTC4 (if available)

Paralogs for MROH7-TTC4 Gene

Paralogs for MROH7-TTC4 Gene

(4) SIMAP similar genes for MROH7-TTC4 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with MROH7-TTC4: view

Variants for MROH7-TTC4 Gene

Sequence variations from dbSNP and Humsavar for MROH7-TTC4 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs10449738 -- 54,741,157(+) ATGCT(A/T)TATAT intron-variant
rs10449750 -- 54,739,684(+) CAAAG(A/C)AGAGA intron-variant
rs10489661 -- 54,723,826(-) CAGTA(A/G)TAATA intron-variant
rs10489662 -- 54,723,512(-) CAGAA(C/T)TAGTC intron-variant
rs10489663 -- 54,721,013(-) CTTGT(C/T)AAGAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MROH7-TTC4 Gene

Variant ID Type Subtype PubMed ID
dgv166n100 CNV gain 25217958
dgv38e212 CNV gain 25503493
dgv39e212 CNV loss 25503493
dgv90e59 CNV tandem duplication 20981092
esv3390763 CNV duplication 20981092
nsv1000673 CNV gain 25217958
nsv1004778 CNV gain 25217958
nsv1145344 CNV deletion 24896259
nsv461561 CNV gain 19166990
nsv461594 CNV gain 19166990
nsv461605 CNV gain 19166990
nsv546266 CNV gain 21841781
nsv546269 CNV gain 21841781
nsv546299 CNV gain 21841781
nsv817614 CNV gain 22305530
nsv829904 CNV loss 17160897
nsv910 CNV deletion 18451855

Variation tolerance for MROH7-TTC4 Gene

Gene Damage Index Score: 0.25; 5.57% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MROH7-TTC4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MROH7-TTC4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MROH7-TTC4 Gene

Disorders for MROH7-TTC4 Gene

Relevant External Links for MROH7-TTC4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MROH7-TTC4

No disorders were found for MROH7-TTC4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MROH7-TTC4 Gene

Publications for MROH7-TTC4 Gene

  1. A genome-wide association study of behavioral disinhibition. (PMID: 23942779) McGue M. … Iacono W.G. (Behav. Genet. 2013) 3 64
  2. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MROH7-TTC4 Gene

Sources for MROH7-TTC4 Gene

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