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Aliases for MRGPRG-AS1 Gene

Subcategory (RNA class) for MRGPRG-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MRGPRG-AS1 Gene

  • MRGPRG Antisense RNA 1 2 3 4 5
  • MRGPRG Antisense RNA 1 (Non-Protein Coding) 2 3
  • C11orf36 3 4
  • Chromosome 11 Open Reading Frame 36 2
  • MRGPRG Antisense Gene Protein 1 4
  • HSD-40 3

External Ids for MRGPRG-AS1 Gene

Previous HGNC Symbols for MRGPRG-AS1 Gene

  • C11orf36

Previous GeneCards Identifiers for MRGPRG-AS1 Gene

  • GC11P003240

Summaries for MRGPRG-AS1 Gene

GeneCards Summary for MRGPRG-AS1 Gene

MRGPRG-AS1 (MRGPRG Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRGPRG-AS1 Gene

Genomics for MRGPRG-AS1 Gene

Regulatory Elements for MRGPRG-AS1 Gene

Enhancers for MRGPRG-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G003000 1.4 FANTOM5 ENCODE dbSUPER 9.9 -217.3 -217305 2.1 HDGF NFIB SIN3A ARID4B RAD21 ETV6 IKZF2 EGR2 ZNF263 ZNF654 NAP1L4 CARS-AS1 CARS SNORA54 RNU1-91P ENSG00000224513 PHLDA2 SLC22A18 MRGPRG MRGPRG-AS1
GH11G003137 1.1 ENCODE dbSUPER 10.9 -79.8 -79846 1.2 NFIB KLF17 RAD21 SCRT2 EGR2 SP3 NR2F2 ZFP69B NFIC SMARCA4 OSBPL5 MRGPRG-AS1 MRGPRG ENSG00000224513 GC11P003163 ENSG00000236710
GH11G003110 0.8 ENCODE 11.3 -108.0 -108017 0.2 BCOR CTCF ESRRA CBX3 RB1 YBX1 RAD21 ZNF366 SMC3 EGR2 CARS MRGPRG MRGPRG-AS1 ENSG00000224513 RNU1-91P NAP1L4 ENSG00000236710 GC11P003163
GH11G003339 0.8 ENCODE 10.9 +121.9 121861 1.6 HDAC1 CBX3 ATF1 NFRKB GATA2 FOS CREM PAF1 JUNB ZEB2 ZNF195 TSSC2 ENSG00000224513 MRGPRG MRGPRG-AS1 RNU1-91P NAP1L4 SNORA54 ART1 ART5
GH11G002997 0.7 ENCODE dbSUPER 9.9 -220.0 -220040 0.6 ZNF121 RFX1 SP7 CARS-AS1 CARS NAP1L4 SNORA54 RNU1-91P ENSG00000224513 PHLDA2 SLC22A18 MRGPRG MRGPRG-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MRGPRG-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MRGPRG-AS1 Gene

Chromosome:
11
Start:
3,218,332 bp from pter
End:
3,223,131 bp from pter
Size:
4,800 bases
Orientation:
Plus strand

Genomic View for MRGPRG-AS1 Gene

Genes around MRGPRG-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRGPRG-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRGPRG-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRGPRG-AS1 Gene

Proteins for MRGPRG-AS1 Gene

  • Protein details for MRGPRG-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q2M3A8-MRAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein MRGPRG-AS1
    Protein Accession:
    Q2M3A8
    Secondary Accessions:
    • Q6TF48
    • Q8N7R8
    • Q8N9X7

    Protein attributes for MRGPRG-AS1 Gene

    Size:
    158 amino acids
    Molecular mass:
    16456 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MRGPRG-AS1 Gene

Post-translational modifications for MRGPRG-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRGPRG-AS1 Gene

Domains & Families for MRGPRG-AS1 Gene

Protein Domains for MRGPRG-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MRGPRG-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRGPRG-AS1 Gene

Function for MRGPRG-AS1 Gene

Phenotypes for MRGPRG-AS1 Gene

GenomeRNAi human phenotypes for MRGPRG-AS1:
genes like me logo Genes that share phenotypes with MRGPRG-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRGPRG-AS1 Gene

Localization for MRGPRG-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MRGPRG-AS1 Gene

Pathways & Interactions for MRGPRG-AS1 Gene

SuperPathways for MRGPRG-AS1 Gene

No Data Available

Interacting Proteins for MRGPRG-AS1 Gene

Gene Ontology (GO) - Biological Process for MRGPRG-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRGPRG-AS1 Gene

Drugs & Compounds for MRGPRG-AS1 Gene

No Compound Related Data Available

Transcripts for MRGPRG-AS1 Gene

mRNA/cDNA for MRGPRG-AS1 Gene

(1) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRGPRG-AS1 Gene

MRGPRG antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRGPRG-AS1 Gene

No ASD Table

Relevant External Links for MRGPRG-AS1 Gene

GeneLoc Exon Structure for
MRGPRG-AS1
ECgene alternative splicing isoforms for
MRGPRG-AS1

Expression for MRGPRG-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRGPRG-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MRGPRG-AS1 Gene

This gene is overexpressed in Testis (x52.3).

SOURCE GeneReport for Unigene cluster for MRGPRG-AS1 Gene:

Hs.151154
genes like me logo Genes that share expression patterns with MRGPRG-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRGPRG-AS1 Gene

Orthologs for MRGPRG-AS1 Gene

Evolution for MRGPRG-AS1 Gene

ENSEMBL:
Gene Tree for MRGPRG-AS1 (if available)
TreeFam:
Gene Tree for MRGPRG-AS1 (if available)

No data available for Orthologs for MRGPRG-AS1 Gene

Paralogs for MRGPRG-AS1 Gene

No data available for Paralogs for MRGPRG-AS1 Gene

Variants for MRGPRG-AS1 Gene

Sequence variations from dbSNP and Humsavar for MRGPRG-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000091336 -- 3,222,964(+) GGCCA(A/G)CAGGG nc-transcript-variant
rs1000180807 -- 3,219,204(+) CCTCT(C/T)CCCCC intron-variant, upstream-variant-2KB
rs1000262710 -- 3,220,431(+) TCCTC(A/G)AGGAG intron-variant, upstream-variant-2KB
rs1000513055 -- 3,223,375(+) GGAAA(A/C)CAAGA downstream-variant-500B
rs1000554484 -- 3,218,968(+) CCCAG(C/T)GGCGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MRGPRG-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv176e214 CNV gain 21293372
dgv19e180 CNV loss 20482838
dgv574n106 CNV deletion 24896259
esv2678047 CNV deletion 23128226
esv27427 CNV loss 19812545
esv2744033 CNV deletion 23290073
esv2759796 CNV gain+loss 17122850
esv3259052 CNV deletion 24192839
esv33102 CNV loss 17666407
esv3547230 CNV deletion 23714750
esv3625135 CNV loss 21293372
esv3891908 CNV loss 25118596
esv992308 CNV deletion 20482838
nsv428245 CNV gain 18775914
nsv469931 CNV loss 18288195
nsv517153 CNV loss 19592680
nsv523703 CNV loss 19592680
nsv524468 CNV loss 19592680
nsv553124 CNV loss 21841781
nsv7649 CNV deletion 18451855
nsv8767 CNV loss 18304495
nsv951295 CNV deletion 24416366

Relevant External Links for MRGPRG-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRGPRG-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRGPRG-AS1 Gene

Disorders for MRGPRG-AS1 Gene

Relevant External Links for MRGPRG-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MRGPRG-AS1

No disorders were found for MRGPRG-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRGPRG-AS1 Gene

Publications for MRGPRG-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene. (PMID: 19490893) Luo J. … Elledge S.J. (Cell 2009) 3 64
  4. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4 64
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MRGPRG-AS1 Gene

Sources for MRGPRG-AS1 Gene

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