MREG Gene
protein-coding GIFtS : 43
GCID: GC02 M216807
melanoregulin
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Aliasesfor MREG gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Melanoregulin 1 DSU1 2 3 5 WDT21 2 Dilute Suppressor Protein Homolog2 3 FLJ101161 Whn-Dependent Transcript 22
Export aliases for MREG gene to outside databases Previous GC identifers: GC02M216516 GC02M208664
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Summariesfor MREG gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: MREG_HUMAN, Q8N565 Function : Plays a role in the incorporation of pigments into hair. May function in membrane fusion and regulate thebiogenesis of disk membranes of photoreceptor rod cells (By similarity)
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Genomic Viewsfor MREG gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000002.11 NC_018913.1 NT_005403.17 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MREG gene promoter: AML1a NF-kappaB NF-AT C/EBPalpha RORalpha1 c-Rel NF-AT4 NF-AT2 NF-AT3 NF-AT1 Other transcription factors Search SABiosciences Chromatin IP Primers for MREG Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MREG
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 2q35 Ensembl cytogenetic band: 2q35 HGNC cytogenetic band: 2q35 MREG Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02M216807: view genomic region
(about GC identifiers )
Start:
216,807,314 bp from pter
End:
216,898,819 bp from pter
Size:
91,506 bases
Orientation:
minus strand
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Proteinsfor MREG gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: MREG_HUMAN, Q8N565 (See
protein sequence )Recommended Name: Melanoregulin Size : 214 amino acids; 24927 Da
Subunit : Interacts with PRPH2 (By similarity)
Subcellular location : Apical cell membrane; Peripheral membrane protein (By similarity). Note=Localizes to the innersegment and basal outer segment of rods in the retina (By similarity)
Secondary accessions : Q53R89 Q53TC1 Q5XKB6 Q9NWC9 Q9P1S1Alternative splicing : 2 isoforms : Q8N565-1 Q8N565-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for MREG: NX_Q8N565 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q8N565 MREG Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins: NP_060470.2 ENSEMBL proteins: ENSP00000406782 ENSP00000263268 ENSP00000411076 ENSP00000413302 ENSP00000404470 Human Recombinant Protein Products for MREG: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0016324 apical plasma membrane
IEA --
MREG for ontologies About GeneDecksing MREG Antibody Products: Assay Products for MREG:
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Protein
Domains / Familiesfor MREG gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section ProtoNet protein and cluster: Q8N565
UniProtKB/Swiss-Prot: MREG_HUMAN, Q8N565 Similarity : Belongs to the melanoregulin family
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Functionfor MREG gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: MREG_HUMAN, Q8N565 Function : Plays a role in the incorporation of pigments into hair. May function in membrane fusion and regulate thebiogenesis of disk membranes of photoreceptor rod cells (By similarity) Phenotypes: 7 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Mreg) :
MREG for phenotypes About GeneDecksing Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MREG (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MREG (see all 2 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MREG (NM_018000 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MREG Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MREG
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MREG
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Pathways & Interactionsfor MREG gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MREG STRING Interaction
Network Preview (showing 1 interactants - click image to see more details)1 Interacting protein for MREG (ENSP00000263268 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table Gene Ontology (GO): 4 biological process terms (GO ID links to tree view) : About this table
MREG for ontologies About GeneDecksing
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Drugs & Compoundsfor MREG gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for MREG Search CenterWatch for drugs/clinical trials and news about MREG
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Transcriptsfor MREG gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MREG gene: NM_018000.2 Unigene Cluster for MREG:
Melanoregulin Hs.620391 [show with all ESTs ] Unigene Representative Sequence: NM_018000 5 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000423087 (uc002vfo.3 ) ENST00000263268 ENST00000439791 ENST00000424992 ENST00000420348 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MREG (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MREG (see all 2 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MREG (NM_018000 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MREG Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MREG
Additional cDNA sequence: AF068290.1 AK000978.1
8 DOTS entries : DT.92423943 DT.100812382
DT.120945432 DT.95274384 DT.120945429 DT.92423944 DT.205768 DT.95114238 24/70 AceView cDNA sequences (see all 70 ):
AI089810 AW182843 CB529033 BC032747 BQ939081 BQ958428 BM692776 BG032393 CR604344 BQ928130 AK000978 BX401402 BG167210 AA621713 AA557145 BE042763 AI564124 NM_018000 BQ214197 BG388147 BI859498 AA364072 CN481592 BU552477 GeneLoc Exon Structure
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Expression for MREG gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MREG expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TTATGTAAAAAbout this image MREG expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Ovary Ovigerous Cord Ovarian Somatic Cells Ovary Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See MREG Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MREG SOURCE GeneReport for Unigene cluster: Hs.620391 UniProtKB/Swiss-Prot: MREG_HUMAN, Q8N565 Tissue specificity : Expressed in photoreceptor cells (at protein level) SABiosciences Custom PCR Arrays for MREG Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MREGBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat MREG QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MREG QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MREG In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MREG
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Orthologsfor MREG gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for MREG gene from 5/13 species (see all 13 ) About this table
ENSEMBL Gene Tree for MREG (if available)TreeFam Gene Tree for MREG (if available)
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Paralogsfor MREG gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for MREG gene
MREG for paralogs About GeneDecksing 1 Pseudogenes.org Pseudogene for MREG PGOHUM00000239393
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Genomic Variantsfor MREG gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 2 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MREG (216807314 - 216898819 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for MREG: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MREG
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Disorders
/ Diseasesfor MREG gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MREG for disorders About GeneDecksing
OMIM gene information: 609207
OMIM disorders : --3 diseases for MREG : About MalaCards chronic obstructive pulmonary disease methemoglobinemia pulmonary disease 2 diseases from the University of Copenhagen DISEASES database for MREG :Ocular albinism Hermansky-Pudlak syndrome Human Genome Epidemiology (HuGE) Navigator: MREG (1 document)Export disorders for MREG gene to outside databases
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Publicationsfor MREG gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MREG gene, integrated from 9 sources (see all 11 ): (articles sorted by number of sources associating them with MREG) Utopia : connect your pdf to the dynamic world of online information
Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 , 3 Strausberg R.L....Marra M.A. (2002) Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983) 1 Kim W....Gygi S.P. (2011) System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692) 2 Rigbolt K.T....Blagoev B. (2011) Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048) 1 Danielsen J.M....Nielsen M.L. (2011) Multistudy fine mapping of chromosome 2q identifies X RCC5 as a chronic obstructive pulmonary disease susceptibility gene. (PubMed id 20463177) 1 Hersh C.P....Silverman E.K. (2010) hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PubMed id 17207965) 1 Lamesch P.... Vidal M. (2007) The tetraspanin protein peripherin-2 forms a complex with melanoregulin, a putative membrane fusion regulator. (PubMed id 17260955) 2 Boesze-Battaglia K.... Damek-Poprawa M. (2007) Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621) 2 Hillier L.W....Wilson R.K. (2005) dsu functions in a MYO5A-independent pathway to suppress the coat color of dilute mice. (PubMed id 15550542) 1 O'Sullivan T.N....Jenkins N.A. (2004)
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External Searches for MREG gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MREG gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MREG gene
(According to HUGE )
About This Section --
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Specialized Databases showing MREG gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for MREG Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for MREG gene: Search GeneIP for patents involving MREG GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MREG gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for MREG OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MREG OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MREG OriGene Protein Over-expression Lysate for MREG Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for MREG OriGene 3'-UTR Clone for MREG OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MREG OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MREG Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for MREG OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MREG OriGene Custom Protein Services for MREG OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MREG QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MREG QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MREG QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MREG QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MREG QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MREG
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Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MREG
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MREG
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