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Aliases for MPTX1 Gene

Aliases for MPTX1 Gene

  • Mucosal Pentraxin 1 (Pseudogene) 2 3
  • MPTX 3 4
  • Amyloid P Component, Serum Pseudogene 3

External Ids for MPTX1 Gene

Summaries for MPTX1 Gene

GeneCards Summary for MPTX1 Gene

MPTX1 (Mucosal Pentraxin 1 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MPTX1 Gene

Genomics for MPTX1 Gene

Genomic Location for MPTX1 Gene

Start:
159,276,503 bp from pter
End:
159,277,182 bp from pter
Size:
680 bases
Orientation:
Plus strand

Genomic View for MPTX1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MPTX1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MPTX1 Gene

No data available for Regulatory Elements for MPTX1 Gene

Proteins for MPTX1 Gene

  • Protein details for MPTX1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MV57-MPTX_HUMAN
    Recommended name:
    Putative mucosal pentraxin homolog
    Protein Accession:
    A8MV57
    Secondary Accessions:

    Protein attributes for MPTX1 Gene

    Size:
    137 amino acids
    Molecular mass:
    15138 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MPTX1 Gene

Proteomics data for MPTX1 Gene at MOPED

Post-translational modifications for MPTX1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MPTX1 Gene

Domains for MPTX1 Gene

Protein Domains for MPTX1 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A8MV57

UniProtKB/Swiss-Prot:

MPTX_HUMAN
Family:
  • Belongs to the pentaxin family.:
    • A8MV57
genes like me logo Genes that share domains with MPTX1: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for MPTX1 Gene

Function for MPTX1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MPTX1 Gene

Localization for MPTX1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MPTX1 Gene

Pathways for MPTX1 Gene

SuperPathways for MPTX1 Gene

No Data Available

Interacting Proteins for MPTX1 Gene

Gene Ontology (GO) - Biological Process for MPTX1 Gene

None

No data available for Pathways by source for MPTX1 Gene

Transcripts for MPTX1 Gene

mRNA/cDNA for MPTX1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MPTX1 Gene

No ASD Table

Relevant External Links for MPTX1 Gene

GeneLoc Exon Structure for
MPTX1
ECgene alternative splicing isoforms for
MPTX1

Expression for MPTX1 Gene

mRNA expression in normal human tissues for MPTX1 Gene

mRNA Expression by UniProt/SwissProt for MPTX1 Gene

A8MV57-MPTX_HUMAN
Tissue specificity: Not expressed in the intestinal tract including ascending colon, descending colon and rectum. Not expressed in the human colon cancer cell lines HT-29 and CaCo-2.
genes like me logo Genes that share expressions with MPTX1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Protein expression for MPTX1 Gene

Orthologs for MPTX1 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for MPTX1 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Mptx1 16
Species with no ortholog for MPTX1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MPTX1 Gene

ENSEMBL:
Gene Tree for MPTX1 (if available)
TreeFam:
Gene Tree for MPTX1 (if available)

Paralogs for MPTX1 Gene

Selected SIMAP similar genes for MPTX1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with MPTX1: view

No data available for Paralogs for MPTX1 Gene

Variants for MPTX1 Gene

Relevant External Links for MPTX1 Gene

HapMap Linkage Disequilibrium report
MPTX1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for MPTX1 Gene

Disorders for MPTX1 Gene

No disorders were found for MPTX1 Gene.

No data available for UniProtKB/Swiss-Prot for MPTX1 Gene

Publications for MPTX1 Gene

  1. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 3
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4
  3. Dietary modulation and structure prediction of rat mucosal pentraxin (Mptx) protein and loss of function in humans. (PMID: 18850182) van der Meer-van Kraaij C. … Keijer J. (Genes Nutr. 2007) 4

Products for MPTX1 Gene

Sources for MPTX1 Gene

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