Aliases for MPTX1 Gene
Aliases for MPTX1 Gene
External Ids for MPTX1 Gene
- HGNC: 48364
- Entrez Gene: 649458
- Ensembl: ENSG00000215846
- UniProtKB: A8MV57
Summaries for MPTX1 Gene
GeneCards Summary for MPTX1 Gene
MPTX1 (Mucosal Pentraxin 1 (Pseudogene)) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MPTX1 Gene
Genomics for MPTX1 Gene
GeneHancer (GH) Regulatory Elements for MPTX1 Gene
Promoters and enhancers for MPTX1 Gene
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH01I159211 | Enhancer | 0.7 | Ensembl | 0.2 | -65.1 | -65102 | 0.4 | CTCF ARNT CEBPG RAD21 CC2D1A ARID2 SCRT2 SMC3 ZNF143 SCRT1 | CADM3 AIM2 OR10J2P FCER1A OR10J3 DUSP23 ACKR1 CADM3-AS1 MPTX1 | |
GH01I159229 | Enhancer | 0.5 | ENCODE | 0.2 | -46.6 | -46623 | 1.1 | SP1 STAT1 HNF4A RCOR1 REST | FCER1A CADM3-AS1 ACKR1 OR10J2P OR10J3 MPTX1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around MPTX1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for MPTX1 Gene
Genomic Locations for MPTX1 Gene
- chr1:159,276,503-159,277,182
- (GRCh38/hg38)
- Size:
- 680 bases
- Orientation:
- Plus strand
- chr1:159,246,293-159,247,282
- (GRCh37/hg19)
Genomic View for MPTX1 Gene
Genes around MPTX1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q23.2 by Ensembl
- 1q23.2 by Entrez Gene
- 1q23.2 by HGNC
MPTX1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)


RefSeq DNA sequence for MPTX1 Gene
Proteins for MPTX1 Gene
-
Protein details for MPTX1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A8MV57-MPTX_HUMAN
- Recommended name:
- Putative mucosal pentraxin homolog
- Protein Accession:
- A8MV57
Protein attributes for MPTX1 Gene
- Size:
- 137 amino acids
- Molecular mass:
- 15138 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for MPTX1 Gene
No Post-translational modifications
Antibody Products
- antibodies-online: Search results for available MPTX related products ranked by validation data
- Search GeneTex for Antibodies for MPTX1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MPTX1
- Origene Custom Protein Services for MPTX1
- antibodies-online: Search results for available MPTX related products ranked by validation data
- Search GeneTex for Proteins for MPTX1
Assay Products
- antibodies-online: Search results for available MPTX related products ranked by validation data
No data available for DME Specific Peptides for MPTX1 Gene
Domains & Families for MPTX1 Gene
Gene Families for MPTX1 Gene
- HGNC:
Protein Domains for MPTX1 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for MPTX1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
A8MV57- Family:
-
- Belongs to the pentraxin family.
Function for MPTX1 Gene
Phenotypes From GWAS Catalog for MPTX1 Gene
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0046872 | metal ion binding | IEA | -- |
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for MPTX1
-
- Search ViGene Biosciences for MPTX1
CRISPR Products
- Browse CRISPR knockouts for MPTX1
- genomics-online: gRNA clones - Search results for available MPTX gene related products
miRNA Products
- Search ViGene Biosciences for MPTX1
Inhibitory RNA Products
- genomics-online: shRNA clones - Search results for available MPTX gene related products
- Search ViGene Biosciences for MPTX1
Clone Products
- GenScript: Custom all cDNA clones Services for MPTX1
- VectorBuilder custom plasmid, inducible vectors for MPTX1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MPTX1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available MPTX gene related products
- orf clones - Search results for available MPTX gene related products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MPTX1 Gene
Localization for MPTX1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MPTX1 Gene
Transcripts for MPTX1 Gene
mRNA/cDNA for MPTX1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for MPTX1
- genomics-online: gRNA clones - Search results for available MPTX gene related products
miRNA Products
- Search ViGene Biosciences for MPTX1
Inhibitory RNA Products
- genomics-online: shRNA clones - Search results for available MPTX gene related products
- Search ViGene Biosciences for MPTX1
Clone Products
- GenScript: Custom all cDNA clones Services for MPTX1
- VectorBuilder custom plasmid, inducible vectors for MPTX1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MPTX1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available MPTX gene related products
- orf clones - Search results for available MPTX gene related products
Expression for MPTX1 Gene
NURSA nuclear receptor signaling pathways regulating expression of MPTX1 Gene:
MPTX1mRNA Expression by UniProt/SwissProt for MPTX1 Gene:
A8MV57-MPTX_HUMAN
Tissue specificity:
Not expressed in the intestinal tract including ascending colon, descending colon and rectum. Not expressed in the human colon cancer cell lines HT-29 and CaCo-2.
Primer Products
- genomics-online: primer clones - Search results for available MPTX gene related products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MPTX1 Gene
Orthologs for MPTX1 Gene
No data available for Orthologs for MPTX1 Gene
Paralogs for MPTX1 Gene
(2) SIMAP similar genes for MPTX1 Gene using alignment to 1 proteins:
No data available for Paralogs for MPTX1 Gene
Variants for MPTX1 Gene
Additional Variant Information for MPTX1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MPTX1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MPTX1 Gene
Disorders for MPTX1 Gene
No disorders were found for MPTX1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MPTX1 Gene
Publications for MPTX1 Gene
- Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 3 58
- Dietary modulation and structure prediction of rat mucosal pentraxin (Mptx) protein and loss of function in humans. (PMID: 18850182) van der Meer-van Kraaij C … Keijer J (Genes & nutrition 2007) 4 58
- The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 4 58
Products for MPTX1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
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- Browse ELISpot/FluoroSpot Kits and Development Modules
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- Browse Immunoprecipitation Assays
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- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
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- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MPTX1
- Origene Custom Protein Services for MPTX1
- Browse OriGene Inhibitory RNA Products For MPTX1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for MPTX1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MPTX1
- GenScript: Custom all cDNA clones Services for MPTX1
- GenScript Custom Purified and Recombinant Proteins Services for MPTX1
- GenScript Custom Assay Services for MPTX1
- GenScript Custom overexpressing Cell Line Services for MPTX1
- Browse GenScript CRISPR for MPTX1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for MPTX1
- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
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- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
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- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for MPTX1
- VectorBuilder custom plasmid, inducible vectors for MPTX1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MPTX1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available MPTX1 related products ranked by validation data
- antibodies-online: Search results for available MPTX1 related products ranked by validation data
- antibodies-online: Search results for available MPTX1 related products ranked by validation data
- Search GeneTex for Antibodies for MPTX1
- Search GeneTex for Proteins for MPTX1
- Search ViGene Biosciences for MPTX1
- genomics-online: cdna clones - Search results for available MPTX1 gene related products
- orf clones - Search results for available MPTX1 gene related products
- genomics-online: gRNA clones - Search results for available MPTX1 gene related products
- genomics-online: primer clones - Search results for available MPTX1 gene related products
- genomics-online: shRNA clones - Search results for available MPTX1 gene related products
Sources for MPTX1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew