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Aliases for MPPED2 Gene

Aliases for MPPED2 Gene

  • Metallophosphoesterase Domain Containing 2 2 3
  • C11orf8 3 4 6
  • 239FB 3 4 6
  • Metallophosphoesterase Domain-Containing Protein 2 3 4
  • Fetal Brain Protein 239 3 4
  • Chromosome 11 Open Reading Frame 8 2
  • Metallophosphoesterase MPPED2 3
  • EC 3.1.-.- 4
  • D11S302E 6
  • FAM1B 4

External Ids for MPPED2 Gene

Previous HGNC Symbols for MPPED2 Gene

  • C11orf8

Previous GeneCards Identifiers for MPPED2 Gene

  • GC11M030389
  • GC11M030098

Summaries for MPPED2 Gene

Entrez Gene Summary for MPPED2 Gene

  • This gene likely encodes a metallophosphoesterase. The encoded protein may play a role a brain development. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009]

GeneCards Summary for MPPED2 Gene

MPPED2 (Metallophosphoesterase Domain Containing 2) is a Protein Coding gene. Diseases associated with MPPED2 include wagr syndrome. GO annotations related to this gene include hydrolase activity. An important paralog of this gene is MPPED1.

UniProtKB/Swiss-Prot for MPPED2 Gene

  • Displays low metallophosphoesterase activity (in vitro). May play a role in the development of the nervous system (By similarity).

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MPPED2 Gene

Genomics for MPPED2 Gene

Regulatory Elements for MPPED2 Gene

Genomic Location for MPPED2 Gene

Start:
30,384,493 bp from pter
End:
30,586,872 bp from pter
Size:
202,380 bases
Orientation:
Minus strand

Genomic View for MPPED2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MPPED2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MPPED2 Gene

Proteins for MPPED2 Gene

  • Protein details for MPPED2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q15777-MPPD2_HUMAN
    Recommended name:
    Metallophosphoesterase MPPED2
    Protein Accession:
    Q15777
    Secondary Accessions:
    • D3DQZ5
    • E9PB10
    • Q59GE6

    Protein attributes for MPPED2 Gene

    Size:
    294 amino acids
    Molecular mass:
    33360 Da
    Cofactor:
    Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Name=Co(2+); Xref=ChEBI:CHEBI:48828;
    Quaternary structure:
    • Homodimer.
    SequenceCaution:
    • Sequence=BAD92400.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

    Alternative splice isoforms for MPPED2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MPPED2 Gene

Proteomics data for MPPED2 Gene at MOPED

Post-translational modifications for MPPED2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for MPPED2 Gene

No data available for DME Specific Peptides for MPPED2 Gene

Domains for MPPED2 Gene

Protein Domains for MPPED2 Gene

Suggested Antigen Peptide Sequences for MPPED2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q15777

UniProtKB/Swiss-Prot:

MPPD2_HUMAN :
  • Q15777
Family:
  • Belongs to the UPF0046 family.
genes like me logo Genes that share domains with MPPED2: view

No data available for Gene Families for MPPED2 Gene

Function for MPPED2 Gene

Molecular function for MPPED2 Gene

UniProtKB/Swiss-Prot Function: Displays low metallophosphoesterase activity (in vitro). May play a role in the development of the nervous system (By similarity).

Enzyme Numbers (IUBMB) for MPPED2 Gene

Gene Ontology (GO) - Molecular Function for MPPED2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 19060904
GO:0016787 hydrolase activity IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with MPPED2: view

miRNA for MPPED2 Gene

miRTarBase miRNAs that target MPPED2

No data available for Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for MPPED2 Gene

Localization for MPPED2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MPPED2 Gene COMPARTMENTS Subcellular localization image for MPPED2 gene
Compartment Confidence
cytosol 2
nucleus 2
cytoskeleton 1
mitochondrion 1
peroxisome 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for MPPED2 Gene

Pathways for MPPED2 Gene

SuperPathways for MPPED2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MPPED2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007399 nervous system development TAS 7527372
GO:0008152 metabolic process IEA --
genes like me logo Genes that share ontologies with MPPED2: view

No data available for Pathways by source for MPPED2 Gene

Transcripts for MPPED2 Gene

Unigene Clusters for MPPED2 Gene

Metallophosphoesterase domain containing 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MPPED2 Gene

ExUns: 1 ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6 ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13a · 13b
SP1: - - - - - - -
SP2: - -
SP3:
SP4: - - -
SP5: -
SP6: -
SP7: - - - - - -
SP8: - - -

Relevant External Links for MPPED2 Gene

GeneLoc Exon Structure for
MPPED2
ECgene alternative splicing isoforms for
MPPED2

Expression for MPPED2 Gene

mRNA expression in normal human tissues for MPPED2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for MPPED2 Gene

This gene is overexpressed in Thyroid (4.6).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for MPPED2 Gene

SOURCE GeneReport for Unigene cluster for MPPED2 Gene Hs.289795

mRNA Expression by UniProt/SwissProt for MPPED2 Gene

Q15777-MPPD2_HUMAN
Tissue specificity: Expressed predominantly in fetal brain
genes like me logo Genes that share expressions with MPPED2: view

Orthologs for MPPED2 Gene

This gene was present in the common ancestor of animals.

Orthologs for MPPED2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MPPED2 35
  • 99.89 (n)
  • 100 (a)
MPPED2 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia MPPED2 36
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia MPPED2 35
  • 97.85 (n)
  • 100 (a)
MPPED2 36
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mpped2 35
  • 95.8 (n)
  • 99.66 (a)
Mpped2 16
Mpped2 36
  • 100 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia MPPED2 36
  • 99 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MPPED2 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Mpped2 35
  • 95.01 (n)
  • 99.32 (a)
chicken
(Gallus gallus)
Aves MPPED2 35
  • 92.29 (n)
  • 99.66 (a)
MPPED2 36
  • 95 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia MPPED2 36
  • 99 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.24531 35
tropical clawed frog
(Silurana tropicalis)
Amphibia mpped2 35
  • 84.92 (n)
  • 97.62 (a)
Str.19908 35
zebrafish
(Danio rerio)
Actinopterygii mpped2 36
  • 89 (a)
OneToMany
mpped2a 35
  • 81.18 (n)
  • 91.84 (a)
mpped2a 36
  • 93 (a)
OneToMany
wufk34e08 35
fruit fly
(Drosophila melanogaster)
Insecta CG16717 36
  • 44 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea C25E10.12 36
  • 42 (a)
ManyToMany
K07C11.7 36
  • 33 (a)
ManyToMany
T07D4.2 36
  • 34 (a)
ManyToMany
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.7905 35
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 46 (a)
OneToMany
Species with no ortholog for MPPED2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for MPPED2 Gene

ENSEMBL:
Gene Tree for MPPED2 (if available)
TreeFam:
Gene Tree for MPPED2 (if available)

Paralogs for MPPED2 Gene

Paralogs for MPPED2 Gene

Selected SIMAP similar genes for MPPED2 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with MPPED2: view

Variants for MPPED2 Gene

Sequence variations from dbSNP and Humsavar for MPPED2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs13642 -- 30,410,673(-) GTTTA(A/T)TATTG intron-variant, utr-variant-3-prime
rs188394 -- 30,586,465(-) ACTGC(A/G)GGAGG upstream-variant-2KB, utr-variant-5-prime
rs294381 -- 30,586,906(-) TGGGG(A/G)AAAAG upstream-variant-2KB
rs294382 -- 30,585,968(-) AGCAC(G/T)AGAGG intron-variant, upstream-variant-2KB
rs407363 -- 30,582,751(+) TGTCA(A/T)CCTTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MPPED2 Gene

Variant ID Type Subtype PubMed ID
nsv832103 CNV Loss 17160897
nsv825806 CNV Loss 20364138

Relevant External Links for MPPED2 Gene

HapMap Linkage Disequilibrium report
MPPED2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MPPED2 Gene

Disorders for MPPED2 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for MPPED2 Gene including...

Search for MPPED2 Gene in MalaCards »

(2) University of Copenhagen DISEASES for MPPED2 Gene

Relevant External Links for MPPED2

Genetic Association Database (GAD)
MPPED2
Human Genome Epidemiology (HuGE) Navigator
MPPED2
genes like me logo Genes that share disorders with MPPED2: view

No data available for UniProtKB/Swiss-Prot for MPPED2 Gene

Publications for MPPED2 Gene

  1. cDNA sequence, genomic organization, and evolutionary conservation of a novel gene from the WAGR region. (PMID: 8666403) Schwartz F. … Bruns G. (Genomics 1995) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. The 239AB gene on chromosome 22: a novel member of an ancient gene family. (PMID: 9266672) Schwartz F. … Ota T. (Gene 1997) 2 3
  4. Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling. (PMID: 19240061) Trynka G. … Wijmenga C. (Gut 2009) 3 48
  5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48

Products for MPPED2 Gene

Sources for MPPED2 Gene

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