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Aliases for MPPED1 Gene

Aliases for MPPED1 Gene

  • Metallophosphoesterase Domain Containing 1 2 3 5
  • Adult Brain Protein 239 3 4
  • C22orf1 3 4
  • 239AB 3 4
  • FAM1A 3 4
  • Metallophosphoesterase Domain-Containing Protein 1 3
  • Chromosome 22 Open Reading Frame 1 2
  • EC 3.1.-.- 4

External Ids for MPPED1 Gene

Previous HGNC Symbols for MPPED1 Gene

  • C22orf1

Previous GeneCards Identifiers for MPPED1 Gene

  • GC22P042147
  • GC22P042229
  • GC22P042137
  • GC22P043807
  • GC22P026765

Summaries for MPPED1 Gene

GeneCards Summary for MPPED1 Gene

MPPED1 (Metallophosphoesterase Domain Containing 1) is a Protein Coding gene. GO annotations related to this gene include hydrolase activity. An important paralog of this gene is MPPED2.

UniProtKB/Swiss-Prot for MPPED1 Gene

  • May have metallophosphoesterase activity (in vitro).

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MPPED1 Gene

Genomics for MPPED1 Gene

Regulatory Elements for MPPED1 Gene

Enhancers for MPPED1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around MPPED1 on UCSC Golden Path with GeneCards custom track

Promoters for MPPED1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for MPPED1 Gene

Chromosome:
22
Start:
43,411,196 bp from pter
End:
43,507,848 bp from pter
Size:
96,653 bases
Orientation:
Plus strand

Genomic View for MPPED1 Gene

Genes around MPPED1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MPPED1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MPPED1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MPPED1 Gene

Proteins for MPPED1 Gene

  • Protein details for MPPED1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O15442-MPPD1_HUMAN
    Recommended name:
    Metallophosphoesterase domain-containing protein 1
    Protein Accession:
    O15442
    Secondary Accessions:
    • A8K159
    • B7Z2S9
    • Q8N361

    Protein attributes for MPPED1 Gene

    Size:
    326 amino acids
    Molecular mass:
    37207 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAC51673.2; Type=Frameshift; Positions=20; Evidence={ECO:0000305};

    Alternative splice isoforms for MPPED1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MPPED1 Gene

Post-translational modifications for MPPED1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for MPPED1 Gene

No data available for DME Specific Peptides for MPPED1 Gene

Domains & Families for MPPED1 Gene

Protein Domains for MPPED1 Gene

Graphical View of Domain Structure for InterPro Entry

O15442

UniProtKB/Swiss-Prot:

MPPD1_HUMAN :
  • Belongs to the UPF0046 family.
Family:
  • Belongs to the UPF0046 family.
genes like me logo Genes that share domains with MPPED1: view

No data available for Gene Families for MPPED1 Gene

Function for MPPED1 Gene

Molecular function for MPPED1 Gene

UniProtKB/Swiss-Prot Function:
May have metallophosphoesterase activity (in vitro).

Enzyme Numbers (IUBMB) for MPPED1 Gene

Gene Ontology (GO) - Molecular Function for MPPED1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0016787 hydrolase activity IEA --
genes like me logo Genes that share ontologies with MPPED1: view
genes like me logo Genes that share phenotypes with MPPED1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MPPED1 Gene

Localization for MPPED1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MPPED1 Gene COMPARTMENTS Subcellular localization image for MPPED1 gene
Compartment Confidence
extracellular 2
lysosome 1
mitochondrion 1
peroxisome 1
vacuole 1

Gene Ontology (GO) - Cellular Components for MPPED1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with MPPED1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for MPPED1 Gene

Pathways & Interactions for MPPED1 Gene

SuperPathways for MPPED1 Gene

No Data Available

Interacting Proteins for MPPED1 Gene

Gene Ontology (GO) - Biological Process for MPPED1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with MPPED1: view

No data available for Pathways by source and SIGNOR curated interactions for MPPED1 Gene

Drugs & Compounds for MPPED1 Gene

No Compound Related Data Available

Transcripts for MPPED1 Gene

mRNA/cDNA for MPPED1 Gene

(2) REFSEQ mRNAs :
(11) Additional mRNA sequences :
(12) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MPPED1 Gene

Metallophosphoesterase domain containing 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MPPED1 Gene

No ASD Table

Relevant External Links for MPPED1 Gene

GeneLoc Exon Structure for
MPPED1
ECgene alternative splicing isoforms for
MPPED1

Expression for MPPED1 Gene

mRNA expression in normal human tissues for MPPED1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for MPPED1 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x10.6), Brain - Cortex (x10.3), Brain - Anterior cingulate cortex (BA24) (x9.9), Brain - Hippocampus (x5.9), and Liver (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of MPPED1 Gene:

MPPED1

SOURCE GeneReport for Unigene cluster for MPPED1 Gene:

Hs.159538

mRNA Expression by UniProt/SwissProt for MPPED1 Gene:

O15442-MPPD1_HUMAN
Tissue specificity: Expressed predominantly in adult brain.
genes like me logo Genes that share expression patterns with MPPED1: view

Primer Products

No data available for Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for MPPED1 Gene

Orthologs for MPPED1 Gene

This gene was present in the common ancestor of animals.

Orthologs for MPPED1 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia MPPED1 34
  • 93.15 (n)
  • 99.08 (a)
MPPED1 35
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mpped1 34
  • 89.98 (n)
  • 98.16 (a)
Mpped1 16
Mpped1 35
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Mpped1 34
  • 91.21 (n)
  • 98.47 (a)
oppossum
(Monodelphis domestica)
Mammalia MPPED1 35
  • 75 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 97 (a)
OneToMany
-- 35
  • 73 (a)
OneToMany
chicken
(Gallus gallus)
Aves MPPED1 34
  • 80.57 (n)
  • 97.02 (a)
MPPED1 35
  • 97 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia MPPED1 35
  • 96 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii MPPED1 35
  • 88 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP004891 34
  • 54.55 (n)
  • 48.73 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG16717 34
  • 58.58 (n)
  • 55.74 (a)
CG16717 35
  • 45 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea T07D4.2 34
  • 51.63 (n)
  • 49.62 (a)
C25E10.12 35
  • 41 (a)
ManyToMany
K07C11.7 35
  • 36 (a)
ManyToMany
T07D4.2 35
  • 32 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 43 (a)
OneToMany
Species where no ortholog for MPPED1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for MPPED1 Gene

ENSEMBL:
Gene Tree for MPPED1 (if available)
TreeFam:
Gene Tree for MPPED1 (if available)

Paralogs for MPPED1 Gene

Paralogs for MPPED1 Gene

(2) SIMAP similar genes for MPPED1 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with MPPED1: view

Variants for MPPED1 Gene

Sequence variations from dbSNP and Humsavar for MPPED1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs738679 -- 43,415,773(+) CCCCA(A/G)TCTAC intron-variant, upstream-variant-2KB
rs738680 -- 43,418,913(+) CAGGC(A/G)GGAGA intron-variant
rs738681 -- 43,419,529(+) AGAAG(C/T)GGGAG intron-variant
rs738682 -- 43,419,662(+) TAGGA(A/C)ATTCC intron-variant
rs739016 -- 43,451,879(-) AAAAC(C/T)TCCAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MPPED1 Gene

Variant ID Type Subtype PubMed ID
dgv2465n106 CNV deletion 24896259
dgv2619e59 CNV duplication 20981092
dgv736e201 CNV deletion 23290073
esv1484276 CNV insertion 17803354
esv2393908 CNV deletion 18987734
esv2470453 CNV insertion 19546169
esv2657732 CNV deletion 23128226
esv2663442 CNV deletion 23128226
esv2670249 CNV deletion 23128226
esv2671679 CNV deletion 23128226
esv2678841 CNV deletion 23128226
esv2724308 CNV deletion 23290073
esv2724309 CNV deletion 23290073
esv2724310 CNV deletion 23290073
esv2724312 CNV deletion 23290073
esv2724314 CNV deletion 23290073
esv2724315 CNV deletion 23290073
esv3368133 CNV duplication 20981092
esv3647867 CNV loss 21293372
esv3647868 CNV loss 21293372
nsv1072215 CNV deletion 25765185
nsv1072216 CNV deletion 25765185
nsv1073165 CNV deletion 25765185
nsv1077939 CNV duplication 25765185
nsv1078801 CNV insertion 25765185
nsv1114327 CNV deletion 24896259
nsv1116012 CNV insertion 24896259
nsv1117319 CNV tandem duplication 24896259
nsv1121597 CNV deletion 24896259
nsv1123600 CNV deletion 24896259
nsv1124864 CNV duplication 24896259
nsv1126632 CNV deletion 24896259
nsv1129231 CNV insertion 24896259
nsv1129687 CNV tandem duplication 24896259
nsv1136356 CNV deletion 24896259
nsv1148566 CNV deletion 26484159
nsv428392 CNV gain+loss 18775914
nsv459892 CNV gain 19166990
nsv471205 CNV gain 18288195
nsv508739 CNV insertion 20534489
nsv589098 CNV gain 21841781
nsv955169 CNV deletion 24416366

Variation tolerance for MPPED1 Gene

Residual Variation Intolerance Score: 28% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.04; 21.33% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MPPED1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MPPED1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MPPED1 Gene

Disorders for MPPED1 Gene

Relevant External Links for MPPED1

Genetic Association Database (GAD)
MPPED1
Human Genome Epidemiology (HuGE) Navigator
MPPED1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MPPED1

No disorders were found for MPPED1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MPPED1 Gene

Publications for MPPED1 Gene

  1. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 2 3 4 65
  2. The 239AB gene on chromosome 22: a novel member of an ancient gene family. (PMID: 9266672) Schwartz F. … Ota T. (Gene 1997) 2 3 4 65
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 65
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 65
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 65

Products for MPPED1 Gene

Sources for MPPED1 Gene

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