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Aliases for MPP6 Gene

Aliases for MPP6 Gene

  • Membrane Protein, Palmitoylated 6 (MAGUK P55 Subfamily Member 6) 2 3
  • VAM1 3 4 6
  • PALS2 3 6
  • VAM-1 3 4
  • Protein Associated With Lin7 2 3
  • MAGUK P55 Subfamily Member 6 3
  • VELI-Associated MAGUK 1 3
  • Veli-Associated MAGUK 1 4
  • MAGUK Protein P55T 3
  • P55T 3

External Ids for MPP6 Gene

Summaries for MPP6 Gene

Entrez Gene Summary for MPP6 Gene

  • Members of the peripheral membrane-associated guanylate kinase (MAGUK) family function in tumor suppression and receptor clustering by forming multiprotein complexes containing distinct sets of transmembrane, cytoskeletal, and cytoplasmic signaling proteins. All MAGUKs contain a PDZ-SH3-GUK core and are divided into 4 subfamilies, DLG-like (see DLG1; MIM 601014), ZO1-like (see TJP1; MIM 601009), p55-like (see MPP1; MIM 305360), and LIN2-like (see CASK; MIM 300172), based on their size and the presence of additional domains. MPP6 is a member of the p55-like MAGUK subfamily (Tseng et al., 2001 [PubMed 11311936]).[supplied by OMIM, Mar 2008]

GeneCards Summary for MPP6 Gene

MPP6 (Membrane Protein, Palmitoylated 6 (MAGUK P55 Subfamily Member 6)) is a Protein Coding gene. Among its related pathways are Sertoli-Sertoli Cell Junction Dynamics and Sertoli-Sertoli Cell Junction Dynamics. An important paralog of this gene is MPP3.

Gene Wiki entry for MPP6 Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MPP6 Gene

Genomics for MPP6 Gene

Genomic Location for MPP6 Gene

Start:
24,573,268 bp from pter
End:
24,694,193 bp from pter
Size:
120,926 bases
Orientation:
Plus strand

Genomic View for MPP6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MPP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MPP6 Gene

Regulatory Elements for MPP6 Gene

Proteins for MPP6 Gene

  • Protein details for MPP6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NZW5-MPP6_HUMAN
    Recommended name:
    MAGUK p55 subfamily member 6
    Protein Accession:
    Q9NZW5
    Secondary Accessions:
    • A4D157
    • Q9H0E1

    Protein attributes for MPP6 Gene

    Size:
    540 amino acids
    Molecular mass:
    61117 Da
    Quaternary structure:
    • Interacts with CADM1 (By similarity). Interacts with the LIN7 proteins.

neXtProt entry for MPP6 Gene

Proteomics data for MPP6 Gene at MOPED

Post-translational modifications for MPP6 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys195, Lys403, Lys515, and Lys519

No data available for DME Specific Peptides for MPP6 Gene

Domains for MPP6 Gene

UniProtKB/Swiss-Prot:

MPP6_HUMAN
Domain:
  • Contains 1 guanylate kinase-like domain.:
    • Q9NZW5
  • Contains 2 L27 domains.:
    • Q9NZW5
  • Contains 1 PDZ (DHR) domain.:
    • Q9NZW5
  • Contains 1 SH3 domain.:
    • Q9NZW5
Family:
  • Belongs to the MAGUK family.:
    • Q9NZW5
genes like me logo Genes that share domains with MPP6: view

No data available for Gene Families for MPP6 Gene

Function for MPP6 Gene

Gene Ontology (GO) - Molecular Function for MPP6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 11311936
GO:0030165 PDZ domain binding IEA --
genes like me logo Genes that share ontologies with MPP6: view
genes like me logo Genes that share phenotypes with MPP6: view

miRNA for MPP6 Gene

miRTarBase miRNAs that target MPP6

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for MPP6 Gene

Localization for MPP6 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MPP6 Gene

Membrane; Peripheral membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MPP6 Gene COMPARTMENTS Subcellular localization image for MPP6 gene
Compartment Confidence
cytosol 3
nucleus 2
plasma membrane 2
cytoskeleton 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for MPP6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016020 membrane NAS 11311936
GO:0070062 extracellular exosome IDA 20458337
genes like me logo Genes that share ontologies with MPP6: view

Pathways for MPP6 Gene

genes like me logo Genes that share pathways with MPP6: view

Pathways by source for MPP6 Gene

Gene Ontology (GO) - Biological Process for MPP6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006461 protein complex assembly NAS 11311936
genes like me logo Genes that share ontologies with MPP6: view

Transcripts for MPP6 Gene

Unigene Clusters for MPP6 Gene

Membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MPP6 Gene

No ASD Table

Relevant External Links for MPP6 Gene

GeneLoc Exon Structure for
MPP6
ECgene alternative splicing isoforms for
MPP6

Expression for MPP6 Gene

mRNA expression in normal human tissues for MPP6 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for MPP6 Gene

This gene is overexpressed in Testis (4.9).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for MPP6 Gene

SOURCE GeneReport for Unigene cluster for MPP6 Gene Hs.533355

mRNA Expression by UniProt/SwissProt for MPP6 Gene

Q9NZW5-MPP6_HUMAN
Tissue specificity: Abundant in testis, brain, and kidney with lower levels detectable in other tissues
genes like me logo Genes that share expressions with MPP6: view

Orthologs for MPP6 Gene

This gene was present in the common ancestor of animals.

Orthologs for MPP6 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MPP6 36
  • 99.63 (n)
  • 100 (a)
MPP6 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia MPP6 36
  • 94.01 (n)
  • 99.07 (a)
MPP6 37
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia MPP6 36
  • 94.81 (n)
  • 99.63 (a)
MPP6 37
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mpp6 36
  • 90.6 (n)
  • 98.33 (a)
Mpp6 16
Mpp6 37
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia MPP6 37
  • 80 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MPP6 37
  • 90 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Mpp6 36
  • 90.37 (n)
  • 97.41 (a)
chicken
(Gallus gallus)
Aves MPP6 36
  • 84.51 (n)
  • 95.74 (a)
MPP6 37
  • 94 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia MPP6 37
  • 94 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia mpp6 36
  • 77.61 (n)
  • 87.2 (a)
Str.17662 36
zebrafish
(Danio rerio)
Actinopterygii mpp6a 36
  • 69.58 (n)
  • 76.35 (a)
mpp6a 37
  • 74 (a)
OneToMany
mpp6b 37
  • 75 (a)
OneToMany
zgc55662 36
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP008321 36
  • 53.32 (n)
  • 50.1 (a)
fruit fly
(Drosophila melanogaster)
Insecta vari 36
  • 48.22 (n)
  • 43.89 (a)
vari 37
  • 36 (a)
OneToMany
CG9326 38
  • 39 (a)
skf 38
  • 39 (a)
worm
(Caenorhabditis elegans)
Secernentea Y55B1BR.4 38
  • 29 (a)
Species with no ortholog for MPP6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for MPP6 Gene

ENSEMBL:
Gene Tree for MPP6 (if available)
TreeFam:
Gene Tree for MPP6 (if available)

Paralogs for MPP6 Gene

Paralogs for MPP6 Gene

genes like me logo Genes that share paralogs with MPP6: view

Variants for MPP6 Gene

Sequence variations from dbSNP and Humsavar for MPP6 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs713570 -- 24,679,435(-) TTCCA(A/C)CCTGA intron-variant
rs713571 -- 24,679,455(-) GGTAA(C/T)GGAGG intron-variant
rs722218 -- 24,679,091(-) AAATT(G/T)TAGGG intron-variant
rs767421 -- 24,652,712(+) TTTGC(C/G)TCTTC intron-variant
rs886794 -- 24,670,002(-) GGCAG(A/G)GGAAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MPP6 Gene

Variant ID Type Subtype PubMed ID
nsv7393 OTHER Inversion 18451855
nsv526721 CNV Loss 19592680
nsv518495 CNV Loss 19592680
nsv527599 CNV Gain 19592680
esv998133 CNV Deletion 20482838
esv2434979 CNV Deletion 19546169
esv2168364 CNV Deletion 18987734
esv4910 CNV Deletion 18987735
esv996504 CNV Deletion 20482838
esv2734136 CNV Deletion 23290073
esv1546433 CNV Deletion 17803354
esv8712 CNV Loss 19470904
nsv520276 CNV Gain 19592680

Relevant External Links for MPP6 Gene

HapMap Linkage Disequilibrium report
MPP6
Human Gene Mutation Database (HGMD)
MPP6

Disorders for MPP6 Gene

No disorders were found for MPP6 Gene.

No data available for UniProtKB/Swiss-Prot for MPP6 Gene

Publications for MPP6 Gene

  1. VAM-1: a new member of the MAGUK family binds to human Veli-1 through a conserved domain. (PMID: 11311936) Tseng T.-C. … Chishti A.H. (Biochim. Biophys. Acta 2001) 2 3 4 23
  2. Molecular cloning and characterization of Pals, proteins associated with mLin-7. (PMID: 10753959) Kamberov E. … Margolis B. (J. Biol. Chem. 2000) 2 3
  3. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PMID: 11230166) Wiemann S. … Poustka A. (Genome Res. 2001) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PMID: 15592455) Rush J. … Comb M.J. (Nat. Biotechnol. 2005) 3 4

Products for MPP6 Gene

  • Addgene plasmids for MPP6

Sources for MPP6 Gene

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